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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0474866-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:23403049:23404168:-1 gene:Os08g0474866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to gibberellin receptor GID1L2. (Os08t0474866-00)
Sequence

ATGGCGGCGAGCATCTCGTCTGCGCTGCTGCTCCTGCTCAACATGGCGGGAGCATTGCTC
TCGCCGCGCGCTCCTCCTCCGGCTCCGGCAGCCTTAACCGGCGCCGGCGACGGCGAGGAC
GTCGACTTCTTCTTCTTCCCCTTCCTGGTCCTCTACAAGAGCGGCCGCGTCGTGCGGTTC
ATTGGCACGGACACCGTGCCGGCGTCGATGGACCCGGCCACCGGCGTGGCCTCCAAGGAC
GTGGTCATCGACGCCGACGCCGGCCTCGCCGTCCGCCTCTACTTGCCGAACGTCGCCAAC
CTCACGGCGGGGAAGCGCGGCGGCGGCGACAAGCTGCCGGTGGTGGTGTTCTACCACGGC
GGCGGGTTCGTGACGGAGTCGGCGTTCTCGCCGACGTACCATCGCTACCTCAACGCGCTG
GTGTCGAAGGCCCGGGTGGTCGCCGTGTCCGTGGAGTACCACCTCGCGCCGGAGCACCGG
CTCCCGAGGGCCTACGACGACGCGTGGGCGGCGCTCCGGTGGGTGCTCGAGAACGCCGGT
GCCGGGCCGGAGCCATGGCTGTCGCGCCACGGCGACACGGCGAGGCTGTTCCTCGTCGGG
GACAGCGCCGGCGGCAACATCGCGCACAACGTGGCGATGCGCGCCGGCGGGGAGGGGGGG
CTGCACGGCGGCGCGGCCATCCGCGGCGTGGCTCTCCTCGACCCCTACTTCTGGGGGAAG
CGGCCGGTGCCGTCGGAGACGGCGGACCCGGCGACGCGGCGGTGGCGGGAGCGGACGTGG
GGGTTCGTGTGCGCGGGGCGGTACGAGGTGGACGACCCGGTGATCGACCCGGTGGCCATG
GCGCGCGGGGAGTGGCGGCGGCTCGGGCGCGCGCGCGTGCTGGTGACGGTGGCGTCGCTG
GACACGCTGAGCGCGAGGGGCCGCGCCTACGTCGCGGCGGCCAGGGCGAGCGGCTGGGGC
GGCGAGGCGGTGCTGTACGAGACGCCCGGCGAGAACCATGTCTACTTCCTCGTGGAGCCG
GACGGCGAGAAGGCGGCCAAGGAGATGGATGCTGTCGTCGCATTCATCAATGAAGGAGAA
CAAGTGATCACAGCTTCAAGAATGGATGCTTAA

Peptide Sequence

PEP ID

Os08t0474866-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:23403049:23404168:-1 gene:Os08g0474866 transcript:Os08t0474866-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to gibberellin receptor GID1L2. (Os08t0474866-00)
Sequence

MAASISSALLLLLNMAGALLSPRAPPPAPAALTGAGDGEDVDFFFFPFLVLYKSGRVVRF
IGTDTVPASMDPATGVASKDVVIDADAGLAVRLYLPNVANLTAGKRGGGDKLPVVVFYHG
GGFVTESAFSPTYHRYLNALVSKARVVAVSVEYHLAPEHRLPRAYDDAWAALRWVLENAG
AGPEPWLSRHGDTARLFLVGDSAGGNIAHNVAMRAGGEGGLHGGAAIRGVALLDPYFWGK
RPVPSETADPATRRWRERTWGFVCAGRYEVDDPVIDPVAMARGEWRRLGRARVLVTVASL
DTLSARGRAYVAAARASGWGGEAVLYETPGENHVYFLVEPDGEKAAKEMDAVVAFINEGE
QVITASRMDA

Transcript Sequence

Transcript ID

Os08t0474866-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:23403049:23404168:-1 gene:Os08g0474866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to gibberellin receptor GID1L2. (Os08t0474866-00)
Sequence

TTTGCTCATGGCGGCGAGCATCTCGTCTGCGCTGCTGCTCCTGCTCAACATGGCGGGAGC
ATTGCTCTCGCCGCGCGCTCCTCCTCCGGCTCCGGCAGCCTTAACCGGCGCCGGCGACGG
CGAGGACGTCGACTTCTTCTTCTTCCCCTTCCTGGTCCTCTACAAGAGCGGCCGCGTCGT
GCGGTTCATTGGCACGGACACCGTGCCGGCGTCGATGGACCCGGCCACCGGCGTGGCCTC
CAAGGACGTGGTCATCGACGCCGACGCCGGCCTCGCCGTCCGCCTCTACTTGCCGAACGT
CGCCAACCTCACGGCGGGGAAGCGCGGCGGCGGCGACAAGCTGCCGGTGGTGGTGTTCTA
CCACGGCGGCGGGTTCGTGACGGAGTCGGCGTTCTCGCCGACGTACCATCGCTACCTCAA
CGCGCTGGTGTCGAAGGCCCGGGTGGTCGCCGTGTCCGTGGAGTACCACCTCGCGCCGGA
GCACCGGCTCCCGAGGGCCTACGACGACGCGTGGGCGGCGCTCCGGTGGGTGCTCGAGAA
CGCCGGTGCCGGGCCGGAGCCATGGCTGTCGCGCCACGGCGACACGGCGAGGCTGTTCCT
CGTCGGGGACAGCGCCGGCGGCAACATCGCGCACAACGTGGCGATGCGCGCCGGCGGGGA
GGGGGGGCTGCACGGCGGCGCGGCCATCCGCGGCGTGGCTCTCCTCGACCCCTACTTCTG
GGGGAAGCGGCCGGTGCCGTCGGAGACGGCGGACCCGGCGACGCGGCGGTGGCGGGAGCG
GACGTGGGGGTTCGTGTGCGCGGGGCGGTACGAGGTGGACGACCCGGTGATCGACCCGGT
GGCCATGGCGCGCGGGGAGTGGCGGCGGCTCGGGCGCGCGCGCGTGCTGGTGACGGTGGC
GTCGCTGGACACGCTGAGCGCGAGGGGCCGCGCCTACGTCGCGGCGGCCAGGGCGAGCGG
CTGGGGCGGCGAGGCGGTGCTGTACGAGACGCCCGGCGAGAACCATGTCTACTTCCTCGT
GGAGCCGGACGGCGAGAAGGCGGCCAAGGAGATGGATGCTGTCGTCGCATTCATCAATGA
AGGAGAACAAGTGATCACAGCTTCAAGAATGGATGCTTAA