Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0474700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23390712:23402922:1 gene:Os08g0474700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to COPII subunit Sec23 (Fragment). (Os08t0474700-01)
Sequence	ATGTCTGAGTTCCTGGATCTCGAGCTGCAGGATGGGATAAGGATGCCTTGGAATGTTATA CCAGGAACTAAGCAGGATGCTGCAAACTGTGTTGTTCCCGTTTCCGCCATATATACTCCT CTCAGACCAAATCCTGCCATTCCTGTTCTTCCTTACGGCCCCCTTCGTTGCCGCATGTGC CGTTCTATTCTCAACCCTTTCTGCGTTGTTGACTATGTTGCCAAGATTTGGGTTTGTCCG TTCTGCTTTCAGCGCAACCACTTCCCCCAGCACTACTCCTCTATTTCAGAAAGCAATCTC CCTGCAGAACTGTTTCCTCAATATACTACAGTTGAGTTCATGTCCACTGCCGAAACTGGT CCTGTAGTACCACCAGTCTTCCTCTTTGTTGTTGATACTTGCATGATTGAGGAGGAAATT GATTATTTGAAGTCTGCTCTAGCGCAAGCGATTGAGCTCTTGCCAGACCAATCTCTTGTT GGATTCATTACATTTGGGACATACGTGCAGGTGCATGAATTGGGTTTTGGTTTGTTGCCG AAATCATATGTCTTCAAGGGGACGAAGGAGGTTACAAAGGATCAAATTCTTGAACAAATG TGCTTCTTTGCAGGGAAAACAAAACCTACAACAGGTGTTATCGCGGGCTCAAGGGATGGC CTTTCAGCAGAGAGCATTTCTAGGTTCCTGTTGCCTGCTTCTGAGTGCGAGTTTGTGTTG AATTCAATTATAGAAGAACTGCAGAAGGATCCTTGGCCAGTTTCAGCTGATCAGCGTGCA TCAAGATGTACTGGAACTGCATTAAGTGTTGCAGCCAGTCTATTGGGGGTCTGTGTCCCA GGATCAGGTGCTAGAATTATGGCATTCATAGGGGGTCCATCTACAGAGGGGCCTGGTTCT ATCGTATCCAAGTCCTTGTCAGAACCAATTCGTTCACATAAAGACCTTGATAAAGGTTCT GCTCCACTTTATACCAAAGCTGTTAAATTCTATGAGGAGATCTCAAAGCAGCTTGTACAT CAAGGCCATGTGCTTGATTTTTTTGCATGTGCACTTGACCAGGTTGGTGTTGCTGAGATG AAGGTTGCAGTGGAGAGGACTGGGGGAATAGTTGTGCTTGCAGAAAGTTTTGGCCATTCT GTTTTTAAAGAGTCACTCCAACGCATTTTTCAGTCCAGCGACAATGATCTTGGCTTATCA TTCAATGGTATATTTGAAATTAACTGCTCAAAGGATGTCAAAATTCAAGGCATTATTGGA CCTTGTACTTCCCTGGAGAAGAAAAGTCCTCTATCCTCAGATACAGTTGTAGGCCAGGGA AGCACTAGCGCCTGGAAGATGTGTGGTCTAGACAGGAAAACATCAATATGTTTAGTGTTT GATATTGCAAAAAAAGATGGGCCCGATGCAATTAGTCAATCAACAAGCAATCAGTTCTAC TTCCAATTCTTAACATATTATCAGCATCATGAGGGTCAGATGAGATTACGAGCTACTACA CTTTCCAGAAGATGGGTTGCTGGTTCTGGTGGTGTGCAGGATCTAATAGATGGTTTTGAT CAAGAGGCAGCTGCTGCAGTCATGGCACGCTTGGTCTCATTTAAGATGGAAGCTGAGGCT GATTTTGACCCAATAAGATGGCTTGATCGAGCATTAATTAGTATGTGCTCAAAATTTGGA GACTATCAGAAGGAAACACCCTCATCTTTCAGTTTATCTCCACGTCTATCAATATTTCCA CAATTTATGTTTAATTTAAGGCGTTCTCAGTTTGTTCAGGTGTTTAATAATAGTCCAGAT GAAACTGCATATTTTAGGATGATGTTAAACAGAGAGAATGTAGCGAATGCAGTTGTGATG ATCCAGCCTTCACTTATATCATATTCATTTCAATCAGGCCCAGAGCCTGTTCTGTTGGAT GTAACTGCAATTGCTGCTGACAGGATCCTTTTGTTGGATTCTTATTTTACTATCGTCATA TTCCATGGGATAACCATTGCGCAGTGGCGAAAGGCTGGCTACCAAGATCAGCAAGGGCAT GAGGCATTTGCTCAGTTGTTGAAAGCTCCACGTGAGGAAACTGATTCGATAATCAAGGAG CGCTTTCCTGTTCCTCGTTTGGTCGTGTGTGATCAATATGGTTCTCAGGCTCGGTTTTTA CTAGCAAAGCTTAATCCGTCTGTCACATATAACTCTGACAATCCTCCACCACCTGGAGGA GATGTCATATTCACGGATGATGTGAGCTTCGAAGTCTTCATGGATCACCTGCAGCGGCTG GCAGTTCAGTAG

Peptide Sequence

PEP ID	Os08t0474700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23390712:23402922:1 gene:Os08g0474700 transcript:Os08t0474700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to COPII subunit Sec23 (Fragment). (Os08t0474700-01)
Sequence	MSEFLDLELQDGIRMPWNVIPGTKQDAANCVVPVSAIYTPLRPNPAIPVLPYGPLRCRMC RSILNPFCVVDYVAKIWVCPFCFQRNHFPQHYSSISESNLPAELFPQYTTVEFMSTAETG PVVPPVFLFVVDTCMIEEEIDYLKSALAQAIELLPDQSLVGFITFGTYVQVHELGFGLLP KSYVFKGTKEVTKDQILEQMCFFAGKTKPTTGVIAGSRDGLSAESISRFLLPASECEFVL NSIIEELQKDPWPVSADQRASRCTGTALSVAASLLGVCVPGSGARIMAFIGGPSTEGPGS IVSKSLSEPIRSHKDLDKGSAPLYTKAVKFYEEISKQLVHQGHVLDFFACALDQVGVAEM KVAVERTGGIVVLAESFGHSVFKESLQRIFQSSDNDLGLSFNGIFEINCSKDVKIQGIIG PCTSLEKKSPLSSDTVVGQGSTSAWKMCGLDRKTSICLVFDIAKKDGPDAISQSTSNQFY FQFLTYYQHHEGQMRLRATTLSRRWVAGSGGVQDLIDGFDQEAAAAVMARLVSFKMEAEA DFDPIRWLDRALISMCSKFGDYQKETPSSFSLSPRLSIFPQFMFNLRRSQFVQVFNNSPD ETAYFRMMLNRENVANAVVMIQPSLISYSFQSGPEPVLLDVTAIAADRILLLDSYFTIVI FHGITIAQWRKAGYQDQQGHEAFAQLLKAPREETDSIIKERFPVPRLVVCDQYGSQARFL LAKLNPSVTYNSDNPPPPGGDVIFTDDVSFEVFMDHLQRLAVQ

Transcript Sequence

Transcript ID	Os08t0474700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23390712:23402922:1 gene:Os08g0474700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to COPII subunit Sec23 (Fragment). (Os08t0474700-01)
Sequence	GCTCTTTTCCCCGCGGCCATCCCCGTCGCCCCACCGCCGCCGCAGGAGCCCGCCGAGACG ATCTCCTCCGCCGAGCAGCGCCGATCTCCCCTCCCGCGAGCAGCGGCGGCCGGCGACCTG CTGCTTCTGCCGAATTCTCTCCGATTTGCAGGCCAAAGGCCTGATACAATTACCAAACAG AGGCTGTTTTGAAGACACTATAGTTAGGGGCTTAGAGTAACCTGGTTACAGATAATGTCT GAGTTCCTGGATCTCGAGCTGCAGGATGGGATAAGGATGCCTTGGAATGTTATACCAGGA ACTAAGCAGGATGCTGCAAACTGTGTTGTTCCCGTTTCCGCCATATATACTCCTCTCAGA CCAAATCCTGCCATTCCTGTTCTTCCTTACGGCCCCCTTCGTTGCCGCATGTGCCGTTCT ATTCTCAACCCTTTCTGCGTTGTTGACTATGTTGCCAAGATTTGGGTTTGTCCGTTCTGC TTTCAGCGCAACCACTTCCCCCAGCACTACTCCTCTATTTCAGAAAGCAATCTCCCTGCA GAACTGTTTCCTCAATATACTACAGTTGAGTTCATGTCCACTGCCGAAACTGGTCCTGTA GTACCACCAGTCTTCCTCTTTGTTGTTGATACTTGCATGATTGAGGAGGAAATTGATTAT TTGAAGTCTGCTCTAGCGCAAGCGATTGAGCTCTTGCCAGACCAATCTCTTGTTGGATTC ATTACATTTGGGACATACGTGCAGGTGCATGAATTGGGTTTTGGTTTGTTGCCGAAATCA TATGTCTTCAAGGGGACGAAGGAGGTTACAAAGGATCAAATTCTTGAACAAATGTGCTTC TTTGCAGGGAAAACAAAACCTACAACAGGTGTTATCGCGGGCTCAAGGGATGGCCTTTCA GCAGAGAGCATTTCTAGGTTCCTGTTGCCTGCTTCTGAGTGCGAGTTTGTGTTGAATTCA ATTATAGAAGAACTGCAGAAGGATCCTTGGCCAGTTTCAGCTGATCAGCGTGCATCAAGA TGTACTGGAACTGCATTAAGTGTTGCAGCCAGTCTATTGGGGGTCTGTGTCCCAGGATCA GGTGCTAGAATTATGGCATTCATAGGGGGTCCATCTACAGAGGGGCCTGGTTCTATCGTA TCCAAGTCCTTGTCAGAACCAATTCGTTCACATAAAGACCTTGATAAAGGTTCTGCTCCA CTTTATACCAAAGCTGTTAAATTCTATGAGGAGATCTCAAAGCAGCTTGTACATCAAGGC CATGTGCTTGATTTTTTTGCATGTGCACTTGACCAGGTTGGTGTTGCTGAGATGAAGGTT GCAGTGGAGAGGACTGGGGGAATAGTTGTGCTTGCAGAAAGTTTTGGCCATTCTGTTTTT AAAGAGTCACTCCAACGCATTTTTCAGTCCAGCGACAATGATCTTGGCTTATCATTCAAT GGTATATTTGAAATTAACTGCTCAAAGGATGTCAAAATTCAAGGCATTATTGGACCTTGT ACTTCCCTGGAGAAGAAAAGTCCTCTATCCTCAGATACAGTTGTAGGCCAGGGAAGCACT AGCGCCTGGAAGATGTGTGGTCTAGACAGGAAAACATCAATATGTTTAGTGTTTGATATT GCAAAAAAAGATGGGCCCGATGCAATTAGTCAATCAACAAGCAATCAGTTCTACTTCCAA TTCTTAACATATTATCAGCATCATGAGGGTCAGATGAGATTACGAGCTACTACACTTTCC AGAAGATGGGTTGCTGGTTCTGGTGGTGTGCAGGATCTAATAGATGGTTTTGATCAAGAG GCAGCTGCTGCAGTCATGGCACGCTTGGTCTCATTTAAGATGGAAGCTGAGGCTGATTTT GACCCAATAAGATGGCTTGATCGAGCATTAATTAGTATGTGCTCAAAATTTGGAGACTAT CAGAAGGAAACACCCTCATCTTTCAGTTTATCTCCACGTCTATCAATATTTCCACAATTT ATGTTTAATTTAAGGCGTTCTCAGTTTGTTCAGGTGTTTAATAATAGTCCAGATGAAACT GCATATTTTAGGATGATGTTAAACAGAGAGAATGTAGCGAATGCAGTTGTGATGATCCAG CCTTCACTTATATCATATTCATTTCAATCAGGCCCAGAGCCTGTTCTGTTGGATGTAACT GCAATTGCTGCTGACAGGATCCTTTTGTTGGATTCTTATTTTACTATCGTCATATTCCAT GGGATAACCATTGCGCAGTGGCGAAAGGCTGGCTACCAAGATCAGCAAGGGCATGAGGCA TTTGCTCAGTTGTTGAAAGCTCCACGTGAGGAAACTGATTCGATAATCAAGGAGCGCTTT CCTGTTCCTCGTTTGGTCGTGTGTGATCAATATGGTTCTCAGGCTCGGTTTTTACTAGCA AAGCTTAATCCGTCTGTCACATATAACTCTGACAATCCTCCACCACCTGGAGGAGATGTC ATATTCACGGATGATGTGAGCTTCGAAGTCTTCATGGATCACCTGCAGCGGCTGGCAGTT CAGTAGAACACGGTCATGAAGCAATTTTGTATGAATCTTCAATAGTCTCGTCCAGTGTAC AGCAAAGAACGACTTCTCCGTGTAATTTATGCAGGTTACCACATTGTAGTCTCGGATATG CCATTGTTGGCTCTACATCTGTATATTTCCATGGTTATAGGCTGCAAGGATTCTGCCTCC ACTATAAATTCAAGAAGGAACATTCATGATTGTGTAAAATACGTTTCATATCTTTCTCCT