Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0473900-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:23341357:23343299:1 gene:Os08g0473900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3D description:Alpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473900-01);Similar to Alpha amylase isozyme 3D. (Os08t0473900-02);Similar to Alpha amylase isozyme 3D. (Os08t0473900-03)
Sequence	ATGAAGAACACCAGCAGCTTGTGTTTGCTGCTCCTCGTGGTGCTCTGCAGCTTGACCTGT AACTCGGGTCAAGCACAGGTCCTCTTCCAGGGTTTCAACTGGGAGTCGTGGAAGCAGCAG GGTGGCTGGTACAACATGTTGAAAGGCCAAGTCGACGACATCGCCAAGGCCGGGGTCACC CACGTCTGGCTGCCGCCGCCGTCGCACTCCGTGGCGCCGCAGGGGTACATGCCGGGGCGT CTCTACGACCTGGACGCGTCCAAGTACGGCACGGCGGCGGAGCTCAAGTCGCTGATCGCG GCGTTCCACGGGAAGGGCGTCCAGTGCGTCGCCGACGTCGTGATCAACCACCGGTGCGCC GAGAAGAAGGACGCCCGCGGCGTGTACTGCGTGTTCGAGGGCGGGACGCCCGACGACCGC CTCGACTGGGGCCCCGGCATGATCTGCAGCGACGACACGCAGTACTCCGACGGCACGGGC CACCGCGACACCGGCGAGGGGTTCGGCGCGGCGCCCGACATCGACCACCTCAACCCGCGC GTCCAGCGGGAGCTCACCGACTGGCTCAACTGGCTCAAGTCCGACGTCGGCTTCGACGGC TGGCGCCTCGACTTCGCCAAGGGATACTCCACGGACATCGCTAAGATGTACGTCGAGAGC TGCAAGCCGGGCTTCGTCGTCGCCGAGATATGGAACTCGCTGAGCTACAACGGCGACGGC AAGCCGGCGGCCAACCAGGACCAGGGCCGGCAGGAGCTGGTGAACTGGGTGAACGCCGTC GGCGGGCCGGCGATGACGTTCGACTTCACCACCAAGGGCCTCCTGCAGGCGGGCGTCCAG GGCGAGCTGTGGCGGCTGCGCGACGGCAACGGCAAGGCCGCCGGCATGATCGGGTGGCTG CCAGAGAAGGCCGTCACGTTCGTCGACAACCACGACACCGGCTCGACGCAGAAGCTTTGG CCGTTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACCCACCCCGGAGTC CCCTGCATCTTCTACGACCACATGTTCGACTGGAACCTGAAGCAGGAGATAACCGCGCTG GCGGCGATCAGGGAGAGGAACGGCATCAACGCCGGGAGCAAGCTCCGGATCGTCGTCGCC GACGCCGACGCATACGTCGCCGTCGTCGACGAGAAGGTCATGGTGAAGATCGGGACGAGG TACGACGTGGGCAACGCGGTGCCGTCGGATTTCCATCAGACGGTGCACGGCAAGGACTAC AGCGTCTGGGAGAAGGGGTCCCTCCGCGTCCCGGCGGGGCGGCACCTATAG

Peptide Sequence

PEP ID	Os08t0473900-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:23341357:23343299:1 gene:Os08g0473900 transcript:Os08t0473900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3D description:Alpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473900-01);Similar to Alpha amylase isozyme 3D. (Os08t0473900-02);Similar to Alpha amylase isozyme 3D. (Os08t0473900-03)
Sequence	MKNTSSLCLLLLVVLCSLTCNSGQAQVLFQGFNWESWKQQGGWYNMLKGQVDDIAKAGVT HVWLPPPSHSVAPQGYMPGRLYDLDASKYGTAAELKSLIAAFHGKGVQCVADVVINHRCA EKKDARGVYCVFEGGTPDDRLDWGPGMICSDDTQYSDGTGHRDTGEGFGAAPDIDHLNPR VQRELTDWLNWLKSDVGFDGWRLDFAKGYSTDIAKMYVESCKPGFVVAEIWNSLSYNGDG KPAANQDQGRQELVNWVNAVGGPAMTFDFTTKGLLQAGVQGELWRLRDGNGKAAGMIGWL PEKAVTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQEITAL AAIRERNGINAGSKLRIVVADADAYVAVVDEKVMVKIGTRYDVGNAVPSDFHQTVHGKDY SVWEKGSLRVPAGRHL

Transcript Sequence

Transcript ID	Os08t0473900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23341357:23343299:1 gene:Os08g0473900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3D description:Alpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473900-01);Similar to Alpha amylase isozyme 3D. (Os08t0473900-02);Similar to Alpha amylase isozyme 3D. (Os08t0473900-03)
Sequence	ACGAACACATCGATCATCCATCATCTACAAGAGATCGATCAGTAGTGGTTAGCAGCAACT CACTATCGAACACGGTTTCAGCTTACACAGATATGAAGAACACCAGCAGCTTGTGTTTGC TGCTCCTCGTGGTGCTCTGCAGCTTGACCTGTAACTCGGGTCAAGCACAGGTCCTCTTCC AGGGTTTCAACTGGGAGTCGTGGAAGCAGCAGGGTGGCTGGTACAACATGTTGAAAGGCC AAGTCGACGACATCGCCAAGGCCGGGGTCACCCACGTCTGGCTGCCGCCGCCGTCGCACT CCGTGGCGCCGCAGGGGTACATGCCGGGGCGTCTCTACGACCTGGACGCGTCCAAGTACG GCACGGCGGCGGAGCTCAAGTCGCTGATCGCGGCGTTCCACGGGAAGGGCGTCCAGTGCG TCGCCGACGTCGTGATCAACCACCGGTGCGCCGAGAAGAAGGACGCCCGCGGCGTGTACT GCGTGTTCGAGGGCGGGACGCCCGACGACCGCCTCGACTGGGGCCCCGGCATGATCTGCA GCGACGACACGCAGTACTCCGACGGCACGGGCCACCGCGACACCGGCGAGGGGTTCGGCG CGGCGCCCGACATCGACCACCTCAACCCGCGCGTCCAGCGGGAGCTCACCGACTGGCTCA ACTGGCTCAAGTCCGACGTCGGCTTCGACGGCTGGCGCCTCGACTTCGCCAAGGGATACT CCACGGACATCGCTAAGATGTACGTCGAGAGCTGCAAGCCGGGCTTCGTCGTCGCCGAGA TATGGAACTCGCTGAGCTACAACGGCGACGGCAAGCCGGCGGCCAACCAGGACCAGGGCC GGCAGGAGCTGGTGAACTGGGTGAACGCCGTCGGCGGGCCGGCGATGACGTTCGACTTCA CCACCAAGGGCCTCCTGCAGGCGGGCGTCCAGGGCGAGCTGTGGCGGCTGCGCGACGGCA ACGGCAAGGCCGCCGGCATGATCGGGTGGCTGCCAGAGAAGGCCGTCACGTTCGTCGACA ACCACGACACCGGCTCGACGCAGAAGCTTTGGCCGTTCCCCTCCGACAAGGTCATGCAGG GCTACGCCTACATCCTCACCCACCCCGGAGTCCCCTGCATCTTCTACGACCACATGTTCG ACTGGAACCTGAAGCAGGAGATAACCGCGCTGGCGGCGATCAGGGAGAGGAACGGCATCA ACGCCGGGAGCAAGCTCCGGATCGTCGTCGCCGACGCCGACGCATACGTCGCCGTCGTCG ACGAGAAGGTCATGGTGAAGATCGGGACGAGGTACGACGTGGGCAACGCGGTGCCGTCGG ATTTCCATCAGACGGTGCACGGCAAGGACTACAGCGTCTGGGAGAAGGGGTCCCTCCGCG TCCCGGCGGGGCGGCACCTATAGCGGGCTCAAGCCCTAAACTGAACGGGATAGTCATGCT CAAACCAGTTTCTACACGGCAAGAATTTACTGATTCTTATACTTTTGCAGTCAATTAAAT TATGGTTTTTATATATGTAATTTTGTATCCGATTGTAGCGTTCGAATAAGTAGGCAGGCT CTCTAGCCTCTAGGTTAATTGCGGGGCATATGTAGCTTGCCAGTTAATTGTGTTTGTATC ACGCAGTTTGTAACCGTTGGTGCAATATATAATGTCAGGTTCAGGATGCAGTAAAAAATC ATACTGCACCGATCAGTGAGTTTTTATATACTCCTTTTAAAAGTGAGCACC