Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0473600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23335167:23337070:1 gene:Os08g0473600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3E description:Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473600-01);Similar to Isoform 2 of Alpha-amylase isozyme 3E. (Os08t0473600-02)
Sequence	ATGGGCAAGCACCATGTCACCCTGTGTTGTGTCGTTTTTGCTGTGCTCTGCCTGGCGTCC AGCTTAGCACAAGCCCAAGTTCTCTTCCAGGGGTTTAACTGGGAGTCGTGGAGGAAGCAA GGCGGGTGGTACAACTTTCTGCACGAGAAGGTGGAGGAGATCGCCAGCACGGGCGCCACC CACGTCTGGCTCCCGCCGCCGTCGCACTCTGTCTCGCCGCAGGGTTACATGCCGGGGCGG CTCTACGACCTGGACGCGTCCAAGTACGGCACGGAGGCGGAGCTCAAGTCGCTGATCGAG GCATTCCACGACAAGAACGTCGAGTGCCTCGCCGACATCGTCATCAACCACCGCTGCGCC GACTACAAGGACAGCCGCGGCGTGTACTGCGTGTTCGAGGGCGGCACGCCCGACGGCCGC CTCGACTGGGGCCCCGACATGATCTGCAGCGACGACACGCAGTACTCCAACGGCCGCGGC CACCGCGACACCGGCGCCGGGTTCGGCGCCGCGCCCGACATCGACCACCTCAACCCGCGT GTCCAGCGGGAGCTCACCGACTGGCTCAACTGGCTCAGGACCGACCTCGGCTTCGACGGC TGGCGCCTCGACTTCGCCAAGGGCTACTCCGCGCCGCTGGCGAGGATCTACGTCGACAAC ACCAACCCGACGTTCGTCGTCGGCGAGATCTGGAGCTCGCTCATCTACAACGGCGACGGC AAGCCGTCGACCAACCAGGACGCGGACAGGCAGGAGCTGGTGAACTGGGTGGAGGGCGTC GGCAAGCCGGCGACGGCGTTCGACTTCACCACCAAGGGCATCCTCCAGGCCGCCGTGCAG GGCGAGCTGTGGAGGCTCCACGACGGCAACGGCAAGGCGCCCGGCCTCATGGGGTGGATG CCCGATCAGGCCGTAACCTTCGTCGACAACCACGACACCGGCTCGACCCAGTCGCTCTGG CCGTTCCCTTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACTCACCCTGGCATC CCATGCATCTTCTACGACCATGTGTTCGACTGGAACCTGCAGCACGAGATCGCGACGCTG GCTGAAATCCGGTCAAGGAACGGGATCCATGCGGAGAGCACGCTGGACATCCTCAAGGCC GAGGGGGACATCTACGTCGCCATGATCGACGGCAAGGTGATCACCAAGCTCGGGCCGAGG TACGACGCCGGCGGGATCATCCCCTCCGACTTCCATGTCGTGGCGCACGGCAACGACTAC TGCGTCTGGGAGAAGGAAGGCCTCAGGGTTCCTGCCGGTAGAAAGCACTATTAG

Peptide Sequence

PEP ID	Os08t0473600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23335167:23337070:1 gene:Os08g0473600 transcript:Os08t0473600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3E description:Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473600-01);Similar to Isoform 2 of Alpha-amylase isozyme 3E. (Os08t0473600-02)
Sequence	MGKHHVTLCCVVFAVLCLASSLAQAQVLFQGFNWESWRKQGGWYNFLHEKVEEIASTGAT HVWLPPPSHSVSPQGYMPGRLYDLDASKYGTEAELKSLIEAFHDKNVECLADIVINHRCA DYKDSRGVYCVFEGGTPDGRLDWGPDMICSDDTQYSNGRGHRDTGAGFGAAPDIDHLNPR VQRELTDWLNWLRTDLGFDGWRLDFAKGYSAPLARIYVDNTNPTFVVGEIWSSLIYNGDG KPSTNQDADRQELVNWVEGVGKPATAFDFTTKGILQAAVQGELWRLHDGNGKAPGLMGWM PDQAVTFVDNHDTGSTQSLWPFPSDKVMQGYAYILTHPGIPCIFYDHVFDWNLQHEIATL AEIRSRNGIHAESTLDILKAEGDIYVAMIDGKVITKLGPRYDAGGIIPSDFHVVAHGNDY CVWEKEGLRVPAGRKHY

Transcript Sequence

Transcript ID	Os08t0473600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23335167:23337070:1 gene:Os08g0473600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3E description:Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473600-01);Similar to Isoform 2 of Alpha-amylase isozyme 3E. (Os08t0473600-02)
Sequence	GCAGAGAAGCAGAGTACAGCAGGCAGCTCTTCTTCTCTTTGCGAAGGTTGGCTACTTGGC CAGCCATTAGGAAACAAGTTAGTTTGGAGAAGAAGCAGAGTTGAGACTGCATTTGCATTG CTCTGTAGCCATGGGCAAGCACCATGTCACCCTGTGTTGTGTCGTTTTTGCTGTGCTCTG CCTGGCGTCCAGCTTAGCACAAGCCCAAGTTCTCTTCCAGGGGTTTAACTGGGAGTCGTG GAGGAAGCAAGGCGGGTGGTACAACTTTCTGCACGAGAAGGTGGAGGAGATCGCCAGCAC GGGCGCCACCCACGTCTGGCTCCCGCCGCCGTCGCACTCTGTCTCGCCGCAGGGTTACAT GCCGGGGCGGCTCTACGACCTGGACGCGTCCAAGTACGGCACGGAGGCGGAGCTCAAGTC GCTGATCGAGGCATTCCACGACAAGAACGTCGAGTGCCTCGCCGACATCGTCATCAACCA CCGCTGCGCCGACTACAAGGACAGCCGCGGCGTGTACTGCGTGTTCGAGGGCGGCACGCC CGACGGCCGCCTCGACTGGGGCCCCGACATGATCTGCAGCGACGACACGCAGTACTCCAA CGGCCGCGGCCACCGCGACACCGGCGCCGGGTTCGGCGCCGCGCCCGACATCGACCACCT CAACCCGCGTGTCCAGCGGGAGCTCACCGACTGGCTCAACTGGCTCAGGACCGACCTCGG CTTCGACGGCTGGCGCCTCGACTTCGCCAAGGGCTACTCCGCGCCGCTGGCGAGGATCTA CGTCGACAACACCAACCCGACGTTCGTCGTCGGCGAGATCTGGAGCTCGCTCATCTACAA CGGCGACGGCAAGCCGTCGACCAACCAGGACGCGGACAGGCAGGAGCTGGTGAACTGGGT GGAGGGCGTCGGCAAGCCGGCGACGGCGTTCGACTTCACCACCAAGGGCATCCTCCAGGC CGCCGTGCAGGGCGAGCTGTGGAGGCTCCACGACGGCAACGGCAAGGCGCCCGGCCTCAT GGGGTGGATGCCCGATCAGGCCGTAACCTTCGTCGACAACCACGACACCGGCTCGACCCA GTCGCTCTGGCCGTTCCCTTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACTCA CCCTGGCATCCCATGCATCTTCTACGACCATGTGTTCGACTGGAACCTGCAGCACGAGAT CGCGACGCTGGCTGAAATCCGGTCAAGGAACGGGATCCATGCGGAGAGCACGCTGGACAT CCTCAAGGCCGAGGGGGACATCTACGTCGCCATGATCGACGGCAAGGTGATCACCAAGCT CGGGCCGAGGTACGACGCCGGCGGGATCATCCCCTCCGACTTCCATGTCGTGGCGCACGG CAACGACTACTGCGTCTGGGAGAAGGAAGGCCTCAGGGTTCCTGCCGGTAGAAAGCACTA TTAGCTTTAGCTATAGCGATCGAGTTGCATGGTGCTTTGCAACCCTAGATAATATATATA CGTACGTGGCTCTAGCTATGAATCATGCAATTTTGCTGCGAGATGTGTACGAGCGAGCTT CGATCGATGTACGCTTCGTTATAACTAGCGTTCTTCGGAAATAAGTAAGCGGAATGTACC CTGTTAATCCTGCAGAAATGTAGGATGAATGGAATTAACTAGCTACTGTTCGTTTC