Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0469100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:23069303:23070600:1 gene:Os08g0469100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os08t0469100-01)
Sequence	ATGATAAAAAGTTGCTTCAATAATATTTTGCTCAGCGACCAGGGACACTCGCTGACCGTC GGCATCGTGCAGCCGCGCAAGCTCATCGTGGACACCGGCAGCGACCTCATCTGGACGCAG TGCAAGCTGTCCTCCTCCACCGCCGCGGCGGCGAGGCACGGCTCGCCGCCGGTCTACGAC CCCGGCGAGTCCTCCACTTTCGCCTTCCTCCCCTGCAGCGACAGGCTGTGCCAGGAGGGG CAGTTCAGCTTCAAGAACTGCACCAGCAAGAACAGGTGCGTCTACGAGGACGTGTACGGC AGCGCGGCGGCCGTCGGCGTCCTCGCGTCGGAGACCTTCACCTTCGGCGCGCGCCGCGCC GTCTCCCTCCGCCTCGGCTTCGGCTGCGGCGCGCTCTCCGCCGGAAGCCTCATCGGCGCC ACCGGCATCCTGGGGCTTAGCCCGGAGAGCTTGTCCCTCATCACGCAGCTGAAAATACAG AGATTCTCCTACTGCCTCACCCCTTTCGCCGACAAGAAGACGAGCCCGTTGCTGTTCGGC GCAATGGCCGACCTGTCCAGGCACAAGACGACGAGGCCGATCCAAACCACCGCGATAGTG AGCAATCCGGTGGAGACCGTCTACTACTACGTGCCGCTGGTTGGCATCTCGCTCGGGCAC AAGCGGCTCGCCGTGCCGGCGGCGAGCCTCGCAATGAGGCCCGACGGCGGCGGCGGCACG ATCGTCGACTCTGGCAGCACGGTGGCGTACCTCGTGGAGGCGGCGTTCGAGGCCGTCAAG GAGGCCGTGATGGACGTGGTGAGGCTGCCGGTGGCGAACCGGACCGTCGAGGACTACGAG CTCTGCTTCGTGCTGCCGCGCCGCACGGCTGCGGCGGCGATGGAGGCGGTGCAGGTTCCG CCGCTGGTGCTGCACTTCGACGGCGGCGCGGCGATGGTGCTGCCGCGGGACAACTACTTC CAGGAGCCGAGAGCCGGGCTGATGTGCCTGGCCGTGGGCAAGACGACGGACGGCTCCGGC GTGTCCATCATCGGCAACGTCCAGCAGCAGAACATGCACGTACTCTTCGATGTGCAACAC CACAAGTTCTCCTTTGCGCCCACGCAGTGTGATCAAATCTGA

Peptide Sequence

PEP ID	Os08t0469100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:23069303:23070600:1 gene:Os08g0469100 transcript:Os08t0469100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os08t0469100-01)
Sequence	MIKSCFNNILLSDQGHSLTVGIVQPRKLIVDTGSDLIWTQCKLSSSTAAAARHGSPPVYD PGESSTFAFLPCSDRLCQEGQFSFKNCTSKNRCVYEDVYGSAAAVGVLASETFTFGARRA VSLRLGFGCGALSAGSLIGATGILGLSPESLSLITQLKIQRFSYCLTPFADKKTSPLLFG AMADLSRHKTTRPIQTTAIVSNPVETVYYYVPLVGISLGHKRLAVPAASLAMRPDGGGGT IVDSGSTVAYLVEAAFEAVKEAVMDVVRLPVANRTVEDYELCFVLPRRTAAAAMEAVQVP PLVLHFDGGAAMVLPRDNYFQEPRAGLMCLAVGKTTDGSGVSIIGNVQQQNMHVLFDVQH HKFSFAPTQCDQI

Transcript Sequence

Transcript ID	Os08t0469100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23069303:23070600:1 gene:Os08g0469100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os08t0469100-01)
Sequence	GAATGATAAAAAGTTGCTTCAATAATATTTTGCTCAGCGACCAGGGACACTCGCTGACCG TCGGCATCGTGCAGCCGCGCAAGCTCATCGTGGACACCGGCAGCGACCTCATCTGGACGC AGTGCAAGCTGTCCTCCTCCACCGCCGCGGCGGCGAGGCACGGCTCGCCGCCGGTCTACG ACCCCGGCGAGTCCTCCACTTTCGCCTTCCTCCCCTGCAGCGACAGGCTGTGCCAGGAGG GGCAGTTCAGCTTCAAGAACTGCACCAGCAAGAACAGGTGCGTCTACGAGGACGTGTACG GCAGCGCGGCGGCCGTCGGCGTCCTCGCGTCGGAGACCTTCACCTTCGGCGCGCGCCGCG CCGTCTCCCTCCGCCTCGGCTTCGGCTGCGGCGCGCTCTCCGCCGGAAGCCTCATCGGCG CCACCGGCATCCTGGGGCTTAGCCCGGAGAGCTTGTCCCTCATCACGCAGCTGAAAATAC AGAGATTCTCCTACTGCCTCACCCCTTTCGCCGACAAGAAGACGAGCCCGTTGCTGTTCG GCGCAATGGCCGACCTGTCCAGGCACAAGACGACGAGGCCGATCCAAACCACCGCGATAG TGAGCAATCCGGTGGAGACCGTCTACTACTACGTGCCGCTGGTTGGCATCTCGCTCGGGC ACAAGCGGCTCGCCGTGCCGGCGGCGAGCCTCGCAATGAGGCCCGACGGCGGCGGCGGCA CGATCGTCGACTCTGGCAGCACGGTGGCGTACCTCGTGGAGGCGGCGTTCGAGGCCGTCA AGGAGGCCGTGATGGACGTGGTGAGGCTGCCGGTGGCGAACCGGACCGTCGAGGACTACG AGCTCTGCTTCGTGCTGCCGCGCCGCACGGCTGCGGCGGCGATGGAGGCGGTGCAGGTTC CGCCGCTGGTGCTGCACTTCGACGGCGGCGCGGCGATGGTGCTGCCGCGGGACAACTACT TCCAGGAGCCGAGAGCCGGGCTGATGTGCCTGGCCGTGGGCAAGACGACGGACGGCTCCG GCGTGTCCATCATCGGCAACGTCCAGCAGCAGAACATGCACGTACTCTTCGATGTGCAAC ACCACAAGTTCTCCTTTGCGCCCACGCAGTGTGATCAAATCTGAAACACTCTTACTACTA ACACAGTTGTTCTTACAATTTTCCCTTTTATTTTTCCCTGAAAATGTTATTAGCCTTCCG GATTAAGATATCCAATAATAAAAAGGATTCATCGATCAAGTATTGACGTTTCGAAACGAC AAAAGAGAATAAGAGGAAATGCACCACAGATGTATTTG