Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0468700-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:23051707:23055631:-1 gene:Os08g0468700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rubisco activase, nitrate reductase apoenzyme 2, nitrate reductase 2 description:Similar to Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1). (Os08t0468700-00)
Sequence	ATGGCCGCTTCCGTGCAGCCGCGGCAGTTCGGCCACCTCGAGCCGGGCTCCGCGCCGGTG TGCGGCGCCGCATCCTCGAACGGCGCCAAGGCGTACCCTCCCGCGAACGGCATCCCGCGC CGCGCCGACTCACCGGTGCGCGGGTGCGGCTTCCCTCCCCTCGTCTCGCCACCTTCGCGG AAGCCGCCCAGCGATGGGTCGGACGACGAGGAGGAGGAGCAGGAGGACTGGCGGGAGCTG TACGGCTCGCACCTGCAGCTGGAGGTGGAACCGTCGGTGCGCGACGCGCGCGACGAGGGC ACCGCCGACGCGTGGATCGAGCGCAACCCGTTGCTGATCCGGCTCACCGGGAAACACCCG CTGAACTGCGAGGCGCCGCTGGCGAGGCTCATGCACCACGGCTTCATCACCCCGGCTGCG CTGCACTTCGTGCGCAACCACGGCGCAGTGCCGCGGGGTGACTGGTCGACGTGGACCGTC GAGGTGACGGGGCTCGTCAAGCGTCCCATGCGGCTCACCGTGGACGAGCTGGTCAACGGC TTCCCCGCCGTGGAGGTCCCCGTCACGCTGGCCTGCTCGGGGAACCGCCGCAAGGAGCAG AACATGGTGCAGCAGACTGTGGGGTTCAACTTTGGCGCCGCCGCCGTGTCCACGTCGGTG TGGCACGGCGCCCGCCTCCGCGACGTGCTCCGGCGGTGCGGCATCATGCCCAGCAAGGGC GGTGCGCTCAACGTGTGCTTCGAGGGCGCCGAGGACCTCCCCGGCGGCGGCGGCTCCAAG TACGGCACCAGCATCACACGCCAGTGGGCGCTGGACCCGTCGCGGGACATCATGCTCGCC TACATGCAGAATGGCGAGCCGCTGCTCCCCGACCACGGCTTCCCCGTCCGCGCCATCATC CCCGGCTGCACCGGCGGCCGCATGGTCAAGTGGGTCAAGCGCATCATCGTCACCACCGCC GAGTCCGACAACTACTACCATTACAAGGACAACCGCGTCTTCCCGTCCCATGTCGACGCC GAGCTCGCCAACGCCGATGCGTGGTGGTACAAGCCGGAGTACATCATCAACGAGCTGAAC GTGAACTCGGTGATCACGGCGCCCGGGCACGACGAGATCCTGCCCATCAACGGCATCACC ACGCAGCGCGGCTACACCATGAAGGGATACGCCTACTCCGGCGGCGGCAAGAGGATCACG CGGGTGGAGGTGACGCTGGACGGCGGCGAGACATGGCTGGTGTGCGTGCTGGACCTCCCG GAGAAGCCCACCAAGTACGGCAAGCACTGGTGCTGGTGCTTCTGGTCCGTCGAGGTCGAG GTGCTCGACCTCCTCGGCGCCAAGGAGATCGCCGTGCGCGCCTGGGACCAGTCGCACAAC ACCCAGCCCGAGAAGCTCATCTGGAATCTCATGGGGATGATGAACAACTGCTGGTTCAAG GTGAAGGTGAACGTGTGCCGGCCGCACAAGGGTGAGATCGGGCTGGTGTTCGAGCACCCG ACGCAGCCCGGGAACCAGACCGGCGGGTGGATGGCGAGGCAGAAGCACCTGGAGACGGCG GAGGCGGCCGCACCGGGGCTGAAGCGGAGCACGTCGACGCCGTTCATGAACACCACCGAC GGCAAGCAGTTTACCATGTCCGAGGTGCGCAAGCACTCGTCGCAGGACTCGGCGTGGATC GTCGTCCACGGTCACGTCTACGACTGCACGGCCTTCCTCAAGGACCACCCCGGCGGCGCC GACAGCATCCTCATCAACGCCGGCACCGACTGCACCGAGGAGTTCGACGCCATCCACTCC GACAAGGCCAAGGCGCTCCTCGACACCTACCGCATCGGCGAGCTCATCACCACCGGCGCC GGGTACAGCTCCGACAACTCCGTCCACGGCGCGTCCAACCTCTCCCAGCTCGCCCCCATC CGCGAGGCCATCAAGGCGCCGGCGCCCGTCGCGCTCTCCAGCCCGCGCGACAAGGTCCCC TGCCAACTCGTCGACAAGAAGGAGCTCTCCCGCGACGTCCGCCTCTTCCGCTTCGCGCTG CCGTCCTCCGACCAGGTGCTCGGCCTCCCCGTCGGCAAGCACATCTTCGTGTGCGCCAGC ATCGAAGGGAAGCTGTGCATGCGGGCGTACACGCCGACGAGCATGGTCGACGAGGTCGGC CACTTCGACCTCCTCATCAAGGTGTACTTCAAGAACGAGCACCCCAAGTTCCCCGATGGC GGGCTCATGACGCAGTACCTGGACTCGCTCCCCGTGGGCGCCTACATCGACGTCAAGGGG CCACTCGGCCACGTCGAGTACACCGGCCGCGGCGAGTTCGTCATCAACGGCAAGCCGCGG AACGCGCGGCGGCTGGCGATGATCGCCGGCGGGAGCGGGATCACGCCCATGTACCAGGTC ATCCAGTCGGTGCTGCGCGACCAGCCGGAGGACACGACGGAGATGCACCTGGTGTACGCG AACCGGACGGAGGACGACATCCTCCTCCGCGACGAGCTCGACCGGTGGGCGGCGGAGTAC CCGGACAGGCTCAAGGTGTGGTACGTCATCGACCAGGTGAAGCGGCCGGAGGAAGGGTGG AAGTACGGCGTCGGGTTCGTCACGGAGGAGGTGCTGCGGGAGCACGTGCCGGAGGGCGGC GACGACACGCTCGCGCTCGCCTGCGGGCCGCCGCCGATGATCAAGTTCGCCGTCTCGCCG AACCTGGAGAAGATGAAGTACGACATGGCCAATTCTTTCATCGTGTTCTAA

Peptide Sequence

PEP ID	Os08t0468700-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:23051707:23055631:-1 gene:Os08g0468700 transcript:Os08t0468700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rubisco activase, nitrate reductase apoenzyme 2, nitrate reductase 2 description:Similar to Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1). (Os08t0468700-00)
Sequence	MAASVQPRQFGHLEPGSAPVCGAASSNGAKAYPPANGIPRRADSPVRGCGFPPLVSPPSR KPPSDGSDDEEEEQEDWRELYGSHLQLEVEPSVRDARDEGTADAWIERNPLLIRLTGKHP LNCEAPLARLMHHGFITPAALHFVRNHGAVPRGDWSTWTVEVTGLVKRPMRLTVDELVNG FPAVEVPVTLACSGNRRKEQNMVQQTVGFNFGAAAVSTSVWHGARLRDVLRRCGIMPSKG GALNVCFEGAEDLPGGGGSKYGTSITRQWALDPSRDIMLAYMQNGEPLLPDHGFPVRAII PGCTGGRMVKWVKRIIVTTAESDNYYHYKDNRVFPSHVDAELANADAWWYKPEYIINELN VNSVITAPGHDEILPINGITTQRGYTMKGYAYSGGGKRITRVEVTLDGGETWLVCVLDLP EKPTKYGKHWCWCFWSVEVEVLDLLGAKEIAVRAWDQSHNTQPEKLIWNLMGMMNNCWFK VKVNVCRPHKGEIGLVFEHPTQPGNQTGGWMARQKHLETAEAAAPGLKRSTSTPFMNTTD GKQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAIHS DKAKALLDTYRIGELITTGAGYSSDNSVHGASNLSQLAPIREAIKAPAPVALSSPRDKVP CQLVDKKELSRDVRLFRFALPSSDQVLGLPVGKHIFVCASIEGKLCMRAYTPTSMVDEVG HFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGPLGHVEYTGRGEFVINGKPR NARRLAMIAGGSGITPMYQVIQSVLRDQPEDTTEMHLVYANRTEDDILLRDELDRWAAEY PDRLKVWYVIDQVKRPEEGWKYGVGFVTEEVLREHVPEGGDDTLALACGPPPMIKFAVSP NLEKMKYDMANSFIVF

Transcript Sequence

Transcript ID	Os08t0468700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23051707:23055631:-1 gene:Os08g0468700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rubisco activase, nitrate reductase apoenzyme 2, nitrate reductase 2 description:Similar to Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1). (Os08t0468700-00)
Sequence	ACGGCGGCCGGCGTAGCGAGCTGTAGCTGAGCTGAACGCAGAACCGAACACCAAGCATGG CCGCTTCCGTGCAGCCGCGGCAGTTCGGCCACCTCGAGCCGGGCTCCGCGCCGGTGTGCG GCGCCGCATCCTCGAACGGCGCCAAGGCGTACCCTCCCGCGAACGGCATCCCGCGCCGCG CCGACTCACCGGTGCGCGGGTGCGGCTTCCCTCCCCTCGTCTCGCCACCTTCGCGGAAGC CGCCCAGCGATGGGTCGGACGACGAGGAGGAGGAGCAGGAGGACTGGCGGGAGCTGTACG GCTCGCACCTGCAGCTGGAGGTGGAACCGTCGGTGCGCGACGCGCGCGACGAGGGCACCG CCGACGCGTGGATCGAGCGCAACCCGTTGCTGATCCGGCTCACCGGGAAACACCCGCTGA ACTGCGAGGCGCCGCTGGCGAGGCTCATGCACCACGGCTTCATCACCCCGGCTGCGCTGC ACTTCGTGCGCAACCACGGCGCAGTGCCGCGGGGTGACTGGTCGACGTGGACCGTCGAGG TGACGGGGCTCGTCAAGCGTCCCATGCGGCTCACCGTGGACGAGCTGGTCAACGGCTTCC CCGCCGTGGAGGTCCCCGTCACGCTGGCCTGCTCGGGGAACCGCCGCAAGGAGCAGAACA TGGTGCAGCAGACTGTGGGGTTCAACTTTGGCGCCGCCGCCGTGTCCACGTCGGTGTGGC ACGGCGCCCGCCTCCGCGACGTGCTCCGGCGGTGCGGCATCATGCCCAGCAAGGGCGGTG CGCTCAACGTGTGCTTCGAGGGCGCCGAGGACCTCCCCGGCGGCGGCGGCTCCAAGTACG GCACCAGCATCACACGCCAGTGGGCGCTGGACCCGTCGCGGGACATCATGCTCGCCTACA TGCAGAATGGCGAGCCGCTGCTCCCCGACCACGGCTTCCCCGTCCGCGCCATCATCCCCG GCTGCACCGGCGGCCGCATGGTCAAGTGGGTCAAGCGCATCATCGTCACCACCGCCGAGT CCGACAACTACTACCATTACAAGGACAACCGCGTCTTCCCGTCCCATGTCGACGCCGAGC TCGCCAACGCCGATGCGTGGTGGTACAAGCCGGAGTACATCATCAACGAGCTGAACGTGA ACTCGGTGATCACGGCGCCCGGGCACGACGAGATCCTGCCCATCAACGGCATCACCACGC AGCGCGGCTACACCATGAAGGGATACGCCTACTCCGGCGGCGGCAAGAGGATCACGCGGG TGGAGGTGACGCTGGACGGCGGCGAGACATGGCTGGTGTGCGTGCTGGACCTCCCGGAGA AGCCCACCAAGTACGGCAAGCACTGGTGCTGGTGCTTCTGGTCCGTCGAGGTCGAGGTGC TCGACCTCCTCGGCGCCAAGGAGATCGCCGTGCGCGCCTGGGACCAGTCGCACAACACCC AGCCCGAGAAGCTCATCTGGAATCTCATGGGGATGATGAACAACTGCTGGTTCAAGGTGA AGGTGAACGTGTGCCGGCCGCACAAGGGTGAGATCGGGCTGGTGTTCGAGCACCCGACGC AGCCCGGGAACCAGACCGGCGGGTGGATGGCGAGGCAGAAGCACCTGGAGACGGCGGAGG CGGCCGCACCGGGGCTGAAGCGGAGCACGTCGACGCCGTTCATGAACACCACCGACGGCA AGCAGTTTACCATGTCCGAGGTGCGCAAGCACTCGTCGCAGGACTCGGCGTGGATCGTCG TCCACGGTCACGTCTACGACTGCACGGCCTTCCTCAAGGACCACCCCGGCGGCGCCGACA GCATCCTCATCAACGCCGGCACCGACTGCACCGAGGAGTTCGACGCCATCCACTCCGACA AGGCCAAGGCGCTCCTCGACACCTACCGCATCGGCGAGCTCATCACCACCGGCGCCGGGT ACAGCTCCGACAACTCCGTCCACGGCGCGTCCAACCTCTCCCAGCTCGCCCCCATCCGCG AGGCCATCAAGGCGCCGGCGCCCGTCGCGCTCTCCAGCCCGCGCGACAAGGTCCCCTGCC AACTCGTCGACAAGAAGGAGCTCTCCCGCGACGTCCGCCTCTTCCGCTTCGCGCTGCCGT CCTCCGACCAGGTGCTCGGCCTCCCCGTCGGCAAGCACATCTTCGTGTGCGCCAGCATCG AAGGGAAGCTGTGCATGCGGGCGTACACGCCGACGAGCATGGTCGACGAGGTCGGCCACT TCGACCTCCTCATCAAGGTGTACTTCAAGAACGAGCACCCCAAGTTCCCCGATGGCGGGC TCATGACGCAGTACCTGGACTCGCTCCCCGTGGGCGCCTACATCGACGTCAAGGGGCCAC TCGGCCACGTCGAGTACACCGGCCGCGGCGAGTTCGTCATCAACGGCAAGCCGCGGAACG CGCGGCGGCTGGCGATGATCGCCGGCGGGAGCGGGATCACGCCCATGTACCAGGTCATCC AGTCGGTGCTGCGCGACCAGCCGGAGGACACGACGGAGATGCACCTGGTGTACGCGAACC GGACGGAGGACGACATCCTCCTCCGCGACGAGCTCGACCGGTGGGCGGCGGAGTACCCGG ACAGGCTCAAGGTGTGGTACGTCATCGACCAGGTGAAGCGGCCGGAGGAAGGGTGGAAGT ACGGCGTCGGGTTCGTCACGGAGGAGGTGCTGCGGGAGCACGTGCCGGAGGGCGGCGACG ACACGCTCGCGCTCGCCTGCGGGCCGCCGCCGATGATCAAGTTCGCCGTCTCGCCGAACC TGGAGAAGATGAAGTACGACATGGCCAATTCTTTCATCGTGTTCTAAACTCCTACTACTA AATTATACGCACCGCATTAATTATTTTGGTATACGTACGACGATGTATATACGTGTCGTG CCAATTAGAAACGAAATGCTGCATGCATGCGTATGCAAGATGAGAGAAAAAAAAACAATA TCTAAGTTGTAGTAGTGTACTCTTGATAATATCCTAGAGTACATACTGCATACATAGGCC ATGATTTCCCTTTCTAAGAGGCTAGCGGTTGATTCCTTCCTGTATACTA