Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0468100-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:23033973:23038463:1 gene:Os08g0468100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rubisco activase, nitrate reductase apoenzyme 1, nitrate reductase 1, Nitrate reductase [NADH]1 description:Similar to Nitrate reductase. (Os08t0468100-01);Similar to Nitrate reductase. (Os08t0468100-02);Similar to Nitrate reductase. (Os08t0468100-03)
Sequence	TTCAACTGGGGCGCCGCTGGCGTGTCTACGTCGGTGTGGCGCGGCGCCCGCCTCCGCGAC GTGCTCCGGCGGTGCGGCATCATGCCCAGCAAGGGCGGCGCGCTCAACGTGTGCTTCGAG GGCGCCGAGGACCTCCCCGGCGGCGGCGGCTCCAAGTACGGCACCAGCATCACACGCCAG TGGGCGCTGGACCCGTCGCGGGACATCATGCTCGCCTACATGCAGAATGGCGAGCCGCTG CTCCCCGACCACGGCTTCCCCGTCCGCGCCATCATCCCCGGCTGCATCGGCGGCCGCATG GTCAAGTGGGTCAAGCGCATCATCGTCACCACCGCCGAGTCCGACAACTACTACCATTAC AAGGACAACCGCGTCCTCCCGTCCCATGTCGACGCCGAGCTCGCCAACGCCGATGCGTGG TGGTACAAGCCAGAGTACATCATCAACGAGCTGAACGTGAACTCGGTGATCACGACGCCC GGGCACGACGAGATCCTGCCCATCAACGGCATCACCACGCAGCGCGGCTACACCATGAAG GGATACGCCTACTCCGGCGGCGGCAAGAGGATCACGCGGGTGGAGGTGACGCTGGACGGC GGCGAGACATGGCTGGTGTGCGTGCTGGACCTCCCGGAGAAGCCCACCAAGTACGGCAAG CACTGGTGCTGGTGCTTCTGGTCCGTCGAGGTCGAGGTGCTCGACCTCCTCGGCGCCAAG GAGATCGCCGTGCGCGCCTGGGACCAGTCGCACAACACCCAGCCCGAGAAGCTCATCTGG AATCTCATGGGGATGATGAACAACTGCTGGTTCAAGGTGAAGGTGAACGTGTGCCGGCCG CACAAGGGTGAGATCGGGCTGGTGTTCGAGCACCCGACGCAGCCCGGGAACCAGACCGGC GGGTGGATGGCGAGGCAGAAGCACCTGGAGACGGCGGAGGCGGCCGCACCGGGGCTGAAG CGGAGCACGTCGACGCCGTTCATGAACACCACCGACGGCAAGCAGTTTACCATGTCCGAG GTGCGCAAGCACTCGTCGCAGGACTCGGCGTGGATCGTCGTCCACGGTCACGTCTACGAC TGCACGGCCTTCCTCAAGGACCACCCCGGCGGCGCCGACAGCATCCTCATCAACGCCGGC ACCGACTGCACCGAGGAGTTCGACGCCATCCACTCCGACAAGGCCAAGGCGCTCCTCGAC ACCTACCGCATCGGCGAGCTCATCACCACCGGCGCCGGGTACAGCTCCGACAACTCCGTC CACGGCGCGTCCAACCTCTCCCAGCTCGCCCCCATCCGCGAGGCCATCAAGGCGCCGGCG CCCGTCGCGCTCTCCAGCCCGCGCGACAAGGTCCCCTGCCAACTCGTCGACAAGAAGGAG CTCTCCCGCGACGTCCGCCTCTTCCGCTTCGCGCTGCCGTCCTCCGACCAGGTGCTCGGC CTCCCCGTCGGCAAGCACATCTTCGTGTGCGCCAGCATCGAAGGGAAGCTGTGCATGCGG GCGTACACGCCGACGAGCATGGTCGACGAGGTCGGCCACTTCGACCTCCTCATCAAGGTG TACTTCAAGAACGAGCACCCCAAGTTCCCCGATGGCGGGCTCATGACGCAGTACCTGGAC TCGCTCCCCGTGGGCGCCTACATCGACGTCAAGGGGCCACTCGGCCACGTCGAGTACACC GGCCGCGGCGAGTTCGTCATCAACGGCAAGCCGCGGAACGCGCGGCGGCTGGCGATGATC GCCGGCGGGAGCGGGATCACGCCCATGTACCAGGTCATCCAGTCGGTGCTGCGCGACCAG CCGGAGGACACGACGGAGATGCACCTGGTGTACGCGAACCGGACGGAGGACGACATCCTC CTCCGCGACGAGCTCGACCGGTGGGCGGCGGAGTACCCGGACAGGCTCAAGGTGTGGTAC GTCATCGACCAGGTGAAGCGGCCGGAGGAAGGGTGGAAGTACGGCGTCGGGTTCGTCACG GAGGAGGTGCTGCGGGAGCACGTGCCGGAGGGCGGCGACGACACGCTCGCGCTCGCCTGC GGGCCGCCGCCGATGATCAAGTTCGCCGTCTCGCCGAACCTGGAGAAGATGAAGTACGAC ATGGCCAATTCTTTCATCGTGTTCTAA

Peptide Sequence

PEP ID	Os08t0468100-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:23033973:23038463:1 gene:Os08g0468100 transcript:Os08t0468100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rubisco activase, nitrate reductase apoenzyme 1, nitrate reductase 1, Nitrate reductase [NADH]1 description:Similar to Nitrate reductase. (Os08t0468100-01);Similar to Nitrate reductase. (Os08t0468100-02);Similar to Nitrate reductase. (Os08t0468100-03)
Sequence	FNWGAAGVSTSVWRGARLRDVLRRCGIMPSKGGALNVCFEGAEDLPGGGGSKYGTSITRQ WALDPSRDIMLAYMQNGEPLLPDHGFPVRAIIPGCIGGRMVKWVKRIIVTTAESDNYYHY KDNRVLPSHVDAELANADAWWYKPEYIINELNVNSVITTPGHDEILPINGITTQRGYTMK GYAYSGGGKRITRVEVTLDGGETWLVCVLDLPEKPTKYGKHWCWCFWSVEVEVLDLLGAK EIAVRAWDQSHNTQPEKLIWNLMGMMNNCWFKVKVNVCRPHKGEIGLVFEHPTQPGNQTG GWMARQKHLETAEAAAPGLKRSTSTPFMNTTDGKQFTMSEVRKHSSQDSAWIVVHGHVYD CTAFLKDHPGGADSILINAGTDCTEEFDAIHSDKAKALLDTYRIGELITTGAGYSSDNSV HGASNLSQLAPIREAIKAPAPVALSSPRDKVPCQLVDKKELSRDVRLFRFALPSSDQVLG LPVGKHIFVCASIEGKLCMRAYTPTSMVDEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLD SLPVGAYIDVKGPLGHVEYTGRGEFVINGKPRNARRLAMIAGGSGITPMYQVIQSVLRDQ PEDTTEMHLVYANRTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYGVGFVT EEVLREHVPEGGDDTLALACGPPPMIKFAVSPNLEKMKYDMANSFIVF

Transcript Sequence

Transcript ID	Os08t0468100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:23033973:23038463:1 gene:Os08g0468100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rubisco activase, nitrate reductase apoenzyme 1, nitrate reductase 1, Nitrate reductase [NADH]1 description:Similar to Nitrate reductase. (Os08t0468100-01);Similar to Nitrate reductase. (Os08t0468100-02);Similar to Nitrate reductase. (Os08t0468100-03)
Sequence	TTCAACTGGGGCGCCGCTGGCGTGTCTACGTCGGTGTGGCGCGGCGCCCGCCTCCGCGAC GTGCTCCGGCGGTGCGGCATCATGCCCAGCAAGGGCGGCGCGCTCAACGTGTGCTTCGAG GGCGCCGAGGACCTCCCCGGCGGCGGCGGCTCCAAGTACGGCACCAGCATCACACGCCAG TGGGCGCTGGACCCGTCGCGGGACATCATGCTCGCCTACATGCAGAATGGCGAGCCGCTG CTCCCCGACCACGGCTTCCCCGTCCGCGCCATCATCCCCGGCTGCATCGGCGGCCGCATG GTCAAGTGGGTCAAGCGCATCATCGTCACCACCGCCGAGTCCGACAACTACTACCATTAC AAGGACAACCGCGTCCTCCCGTCCCATGTCGACGCCGAGCTCGCCAACGCCGATGCGTGG TGGTACAAGCCAGAGTACATCATCAACGAGCTGAACGTGAACTCGGTGATCACGACGCCC GGGCACGACGAGATCCTGCCCATCAACGGCATCACCACGCAGCGCGGCTACACCATGAAG GGATACGCCTACTCCGGCGGCGGCAAGAGGATCACGCGGGTGGAGGTGACGCTGGACGGC GGCGAGACATGGCTGGTGTGCGTGCTGGACCTCCCGGAGAAGCCCACCAAGTACGGCAAG CACTGGTGCTGGTGCTTCTGGTCCGTCGAGGTCGAGGTGCTCGACCTCCTCGGCGCCAAG GAGATCGCCGTGCGCGCCTGGGACCAGTCGCACAACACCCAGCCCGAGAAGCTCATCTGG AATCTCATGGGGATGATGAACAACTGCTGGTTCAAGGTGAAGGTGAACGTGTGCCGGCCG CACAAGGGTGAGATCGGGCTGGTGTTCGAGCACCCGACGCAGCCCGGGAACCAGACCGGC GGGTGGATGGCGAGGCAGAAGCACCTGGAGACGGCGGAGGCGGCCGCACCGGGGCTGAAG CGGAGCACGTCGACGCCGTTCATGAACACCACCGACGGCAAGCAGTTTACCATGTCCGAG GTGCGCAAGCACTCGTCGCAGGACTCGGCGTGGATCGTCGTCCACGGTCACGTCTACGAC TGCACGGCCTTCCTCAAGGACCACCCCGGCGGCGCCGACAGCATCCTCATCAACGCCGGC ACCGACTGCACCGAGGAGTTCGACGCCATCCACTCCGACAAGGCCAAGGCGCTCCTCGAC ACCTACCGCATCGGCGAGCTCATCACCACCGGCGCCGGGTACAGCTCCGACAACTCCGTC CACGGCGCGTCCAACCTCTCCCAGCTCGCCCCCATCCGCGAGGCCATCAAGGCGCCGGCG CCCGTCGCGCTCTCCAGCCCGCGCGACAAGGTCCCCTGCCAACTCGTCGACAAGAAGGAG CTCTCCCGCGACGTCCGCCTCTTCCGCTTCGCGCTGCCGTCCTCCGACCAGGTGCTCGGC CTCCCCGTCGGCAAGCACATCTTCGTGTGCGCCAGCATCGAAGGGAAGCTGTGCATGCGG GCGTACACGCCGACGAGCATGGTCGACGAGGTCGGCCACTTCGACCTCCTCATCAAGGTG TACTTCAAGAACGAGCACCCCAAGTTCCCCGATGGCGGGCTCATGACGCAGTACCTGGAC TCGCTCCCCGTGGGCGCCTACATCGACGTCAAGGGGCCACTCGGCCACGTCGAGTACACC GGCCGCGGCGAGTTCGTCATCAACGGCAAGCCGCGGAACGCGCGGCGGCTGGCGATGATC GCCGGCGGGAGCGGGATCACGCCCATGTACCAGGTCATCCAGTCGGTGCTGCGCGACCAG CCGGAGGACACGACGGAGATGCACCTGGTGTACGCGAACCGGACGGAGGACGACATCCTC CTCCGCGACGAGCTCGACCGGTGGGCGGCGGAGTACCCGGACAGGCTCAAGGTGTGGTAC GTCATCGACCAGGTGAAGCGGCCGGAGGAAGGGTGGAAGTACGGCGTCGGGTTCGTCACG GAGGAGGTGCTGCGGGAGCACGTGCCGGAGGGCGGCGACGACACGCTCGCGCTCGCCTGC GGGCCGCCGCCGATGATCAAGTTCGCCGTCTCGCCGAACCTGGAGAAGATGAAGTACGAC ATGGCCAATTCTTTCATCGTGTTCTAAACTCCTACTACTAAATTATACGCACCGCATTAA TTATTTTGGTATACGTACGACGATGTATATACGTGTCGTGCCAATTAGAAACGAAATGCT GCATGCATGCGTATGCAAGATGAGAGAAAAAAAAACAATATCTAAGTTGTAGTAGTGTAC TCTTGATAATATCCTAGAGTACATACTGCATACATAGGCCATGATTTCCCTTTCTAAGAG GCTAGCGGTTGATTCCTTCC