Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0467400-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:22988190:22994965:-1 gene:Os08g0467400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc/iron permease family protein. (Os08t0467400-01);Zinc/iron permease family protein. (Os08t0467400-02);Zinc/iron permease family protein. (Os08t0467400-03)
Sequence	ATGCGCGGGGGCCTCCTCGTCCTGCTCCTCCTCACCGCGGCCGTCGCCGGCGGCGGCGGC CACGAGGGCTCCTCCTCCTGCCCCTTCCACGCCCACGACAAGCCCCACGATGATCACCAC CACGGCCACGGCCACGGCCACGGCCACAGCTGCGGCGGCGGCGGGGACGACTCCCACCAC GTGCACCATCATCACCATGGGCATGGGCATGGCCATGACGGCGGGATCCAGCGGCGGCTT CTCCCCGAGGAGCTCGCGGAGGAGGCGGATCTCGAGCTCGACTCCTTCGGCGATCACCAC CACCACCACCACCATCACCATGAACACCACCACCACGACCACCACCATGGCCACGGCGAC TTCCAGGCCGAGTTATCACCCTTGGGTATGTGGCTGAGTGCCATGGGATGCTCGCTTCTG GTCAGCATGGCGTCGCTCGTCTGCCTCGTCCTGCTCCCAGTAATCTTCTTCCAGGGGAAG CCGTCCAAGACCATGGTGGATTGCCTTGCCATCTTCGGGGCAGGTGCGATGCTTGGGGAT TCATTTCTTCATCAACTGCCACATGCCTTTGGTGGAGGGCATTCTCATACACATGATCAT CAGAATCATAATCATTCTCATGAGCATTCACATGCACACTCTCTGGAAGATCTTTCTATT GGTTTGTCTGTTCTATTTGGCATTGTGTTTTTCTTTATTGTTGAGAAGATTGTGAGGTAT GTGGAAGACAATTCTCAGAAAGGGGCTCATGGCATGGGCCACCATCATCACCATCATAAA CGACACGATAGGAGCGACAAGGCCAAGTTGAATCACGCAGAAAAGGATCATGAGGATAAA GGCGTAAATCAAGCAGAAAAGGAACCTTCGCATGATGGTGCAATTGAGAAAACAGATGGT GTAACTCGTGCTGATTCAAAATCTGCAATCCGTAAGAGGGGCTTATCTTCTGGTTCCAAT TCCGCTGATAGAGAGCCTGTCAATTCTGAAAGTGACCCTGCCCCTAACAAAGCATTATCA AGTGAAGATTCCTCTGTTTCCAATTCGAATATGGTGTTCGGCTACCTCAACCTTTTCTCA GATGGTGTTCATAACTTTACTGATGGGATGGCCCTAGGGAGTGCTTTTCTGCTACATGGT TCTGTTGGAGGATGGTCGAGAACTCTATTTCTGCTTGCACATGAACTTCCTCAAGAGGTC GGAGATTTTGGTATCCTGGTGCGCTCAGGATTCACTGTAACTAAAGCCCTATTTTTCAAT TTTCTCTCTGCGTTGGTTGCTCTTGCTGGAACAGCACTGGCATTGTCTTTGGGAAAAGAT CCAGGGCATTCTTCTTTGATTGAGGGATTCACTGCTGGTGGCTTTATTTATATTGCTGTT GCTGGAGTCCTCCCAGAGATGAATGATCAGAAAACAACCGTCAAAAGCTCGATGATTCAG TTGGTTTCCCTGACAATGGGAATGCTGGTTGCCCTCGGCATATCTCTAGTAGAATGA

Peptide Sequence

PEP ID	Os08t0467400-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:22988190:22994965:-1 gene:Os08g0467400 transcript:Os08t0467400-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc/iron permease family protein. (Os08t0467400-01);Zinc/iron permease family protein. (Os08t0467400-02);Zinc/iron permease family protein. (Os08t0467400-03)
Sequence	MRGGLLVLLLLTAAVAGGGGHEGSSSCPFHAHDKPHDDHHHGHGHGHGHSCGGGGDDSHH VHHHHHGHGHGHDGGIQRRLLPEELAEEADLELDSFGDHHHHHHHHHEHHHHDHHHGHGD FQAELSPLGMWLSAMGCSLLVSMASLVCLVLLPVIFFQGKPSKTMVDCLAIFGAGAMLGD SFLHQLPHAFGGGHSHTHDHQNHNHSHEHSHAHSLEDLSIGLSVLFGIVFFFIVEKIVRY VEDNSQKGAHGMGHHHHHHKRHDRSDKAKLNHAEKDHEDKGVNQAEKEPSHDGAIEKTDG VTRADSKSAIRKRGLSSGSNSADREPVNSESDPAPNKALSSEDSSVSNSNMVFGYLNLFS DGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQEVGDFGILVRSGFTVTKALFFN FLSALVALAGTALALSLGKDPGHSSLIEGFTAGGFIYIAVAGVLPEMNDQKTTVKSSMIQ LVSLTMGMLVALGISLVE

Transcript Sequence

Transcript ID	Os08t0467400-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:22988190:22994965:-1 gene:Os08g0467400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc/iron permease family protein. (Os08t0467400-01);Zinc/iron permease family protein. (Os08t0467400-02);Zinc/iron permease family protein. (Os08t0467400-03)
Sequence	GGTAACATTCGGTGTGGTAGTGGGTATACTCGTCCTCCTCTTCGTGCTCGTCCTCGTCGT CACCATCGAGGGCGTCTGCAAGCGCCGCTCCTCCTCCTGATTCCGCCGCGGTCGCTAGCC CTAATGCGCGGGGGCCTCCTCGTCCTGCTCCTCCTCACCGCGGCCGTCGCCGGCGGCGGC GGCCACGAGGGCTCCTCCTCCTGCCCCTTCCACGCCCACGACAAGCCCCACGATGATCAC CACCACGGCCACGGCCACGGCCACGGCCACAGCTGCGGCGGCGGCGGGGACGACTCCCAC CACGTGCACCATCATCACCATGGGCATGGGCATGGCCATGACGGCGGGATCCAGCGGCGG CTTCTCCCCGAGGAGCTCGCGGAGGAGGCGGATCTCGAGCTCGACTCCTTCGGCGATCAC CACCACCACCACCACCATCACCATGAACACCACCACCACGACCACCACCATGGCCACGGC GACTTCCAGGCCGAGTTATCACCCTTGGGTATGTGGCTGAGTGCCATGGGATGCTCGCTT CTGGTCAGCATGGCGTCGCTCGTCTGCCTCGTCCTGCTCCCAGTAATCTTCTTCCAGGGG AAGCCGTCCAAGACCATGGTGGATTGCCTTGCCATCTTCGGGGCAGGTGCGATGCTTGGG GATTCATTTCTTCATCAACTGCCACATGCCTTTGGTGGAGGGCATTCTCATACACATGAT CATCAGAATCATAATCATTCTCATGAGCATTCACATGCACACTCTCTGGAAGATCTTTCT ATTGGTTTGTCTGTTCTATTTGGCATTGTGTTTTTCTTTATTGTTGAGAAGATTGTGAGG TATGTGGAAGACAATTCTCAGAAAGGGGCTCATGGCATGGGCCACCATCATCACCATCAT AAACGACACGATAGGAGCGACAAGGCCAAGTTGAATCACGCAGAAAAGGATCATGAGGAT AAAGGCGTAAATCAAGCAGAAAAGGAACCTTCGCATGATGGTGCAATTGAGAAAACAGAT GGTGTAACTCGTGCTGATTCAAAATCTGCAATCCGTAAGAGGGGCTTATCTTCTGGTTCC AATTCCGCTGATAGAGAGCCTGTCAATTCTGAAAGTGACCCTGCCCCTAACAAAGCATTA TCAAGTGAAGATTCCTCTGTTTCCAATTCGAATATGGTGTTCGGCTACCTCAACCTTTTC TCAGATGGTGTTCATAACTTTACTGATGGGATGGCCCTAGGGAGTGCTTTTCTGCTACAT GGTTCTGTTGGAGGATGGTCGAGAACTCTATTTCTGCTTGCACATGAACTTCCTCAAGAG GTCGGAGATTTTGGTATCCTGGTGCGCTCAGGATTCACTGTAACTAAAGCCCTATTTTTC AATTTTCTCTCTGCGTTGGTTGCTCTTGCTGGAACAGCACTGGCATTGTCTTTGGGAAAA GATCCAGGGCATTCTTCTTTGATTGAGGGATTCACTGCTGGTGGCTTTATTTATATTGCT GTTGCTGGAGTCCTCCCAGAGATGAATGATCAGAAAACAACCGTCAAAAGCTCGATGATT CAGTTGGTTTCCCTGACAATGGGAATGCTGGTTGCCCTCGGCATATCTCTAGTAGAATGA TGACGGAATTTCTGGTTGCAGCTTTAGGGCCTATTGTACTTAAGCCAAGCGGGTAATTCT TGAACAGCTCCAGCCTGTAAGATCAATTCTTCTCGATAGTTTCACCGACTGTGTTACAGA AATTTTGACAATTTTCAAAAAAAAAAGAGAGAGAAAATTTGGTTCTT