Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0458600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:22492748:22497785:-1 gene:Os08g0458600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 33 description:Signal transduction response regulator, receiver region domain containing protein. (Os08t0458600-01)
Sequence	ATGGATCAAGCGAGGATCTCGTTCTTCCCGGATGGTCTCCGTGTGATGATCATCGACGAC GACGCAAAGGCCGTCAGAAGGGCAACGGCGACGTTGTCCCAACTGCAGTACGCAGTGGTG GCGACGCACTCCACCGCAAGCGCTGGTCTGCGTGCCCTCTCCGGCGACAACGTGGTAGAA ATCCAAGCCATCCTCTGCGATGTCCACAAGGTGGTCTCCTCCGGCTTCGACTTCCGCCGC GTCGTCGAGTCCGAGCTTCGCATCCCCGTCATCTACCTTCTGTCGAAGATGGAGGAGGAG GACATGGTCGCCGGCGAGGACGCGGAGTTCCTGAACCACCTCCTGCTGACGGCGACCTAC ATCGTCAGGAAGCCGCTCAACCCCACCGTGATGGCCCGGCTGTGGAGGGTGGTGGCATGG CGCATGTACTGCCTGGAAGAAAGGATTCAGGCCAATGTCGCTGCCAATGCTGGCGCTGGT GGCGAAGACGACGACGACGACGACGACGTAGTTATCGTCGAGGAGCCCCAAGTGCACTTC AAGGTGGTGAGAAGAACGTCCGGTGGCAGCAGGAAGAGGCAGCTGACAATCAACGTCGTC GACGACGGCAACCGCGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGCAGATGCCAAC CCAACCAGGATACTGCAGCACATCACTAGCAACTTACAGGAATTCCGCACGAAGCACCAG AAGAAGGACATGGCCATCGAGCGTCCCCTCATCTCGTCGGACTCCATGTTCCTCAAAGCC ATCCTCCCGACGCTCAAAATCTCACCATGCAACCCCCTGACCCTCACTGGCGGCATCGGT TCAAGCAGTGTCGCCGCGGAGGCCTTCGCTGGCGGCAGCTCTTCAGCTGCACCACTTCAA ATTCCAGTTTTCCAGCAGCAATCCACCGGCAATGGCAACACGGTGATTAGCTTCAGCAAC AATGCTTCACCGATGGCCATGCGTGCGCCAACCGACAATACTATGATATCGTTCAACAAT GTCTCTGCTGCGCCGGTCGCCAATGCGGTGATCTCCTTCAGCAACATTTCTAGGTCTGCT GCCATGCAGGCACCAGCGGCAAGGGGGCAACATCTGTCCGGTGATGTCCAGCAGCTGGAT TTTCCCCAGCAGAAGCTGTACTTTGGGCCCTTCTCCTACCAAGGGCCTCCGCCACCTTCC ATGCACAACCACATCAACCTACTCCCGCCGACGTCCTCCCCTGTGACCTGCTCCATGGAC AAAGGCAAGGTTCCTATTATCGAGCTCCCATATGGGATGCCTGTGGATGACTTCCTCGTC AGTCAAACCACATATGGCGGTGCCGGACCATCCATCGGAGCCACTGACGCTGCTGCCGCT GCGTACCCTTACACAGATGCACCGAGCAATAACGTTGCAACTGGCTGTCTCATGGTGCCA CCAATGGGGCCAGCATTCAGTATCACTGAGCCAACTGTGGTGGCCCAAGGTGAGGGCACC GGCACCGGTGTCGACGCCGGCACATCAGAGAAGAACGCGATAGTAGAAGCACCAAACAAC CCCGCGCCATTAATGGTACTGGATCAGGTTGCTGCTGATGCTGCAATGGATGTTCAAGAA GACATCATGTTCTCTTTGGAATCTCTTCTGGGGCCGGACTATGACCTGCTACCTATGGAA GACGTTAGTGCTCCGGACACCGCTGCAGCCGGTGATGCAGCTGGTGGCTCACTGGACGGA GAGGAAGGCGGCATGGACATTGGTTGGGATCTCGACCTGGATGACATCCTGGTGGAGAAC GTTAATGACTTCGCGTTCCTGGACAACCTTGCCGGGAGCGAGTAG

Peptide Sequence

PEP ID	Os08t0458600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:22492748:22497785:-1 gene:Os08g0458600 transcript:Os08t0458600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 33 description:Signal transduction response regulator, receiver region domain containing protein. (Os08t0458600-01)
Sequence	MDQARISFFPDGLRVMIIDDDAKAVRRATATLSQLQYAVVATHSTASAGLRALSGDNVVE IQAILCDVHKVVSSGFDFRRVVESELRIPVIYLLSKMEEEDMVAGEDAEFLNHLLLTATY IVRKPLNPTVMARLWRVVAWRMYCLEERIQANVAANAGAGGEDDDDDDDVVIVEEPQVHF KVVRRTSGGSRKRQLTINVVDDGNRGSGSGGGGGGGADANPTRILQHITSNLQEFRTKHQ KKDMAIERPLISSDSMFLKAILPTLKISPCNPLTLTGGIGSSSVAAEAFAGGSSSAAPLQ IPVFQQQSTGNGNTVISFSNNASPMAMRAPTDNTMISFNNVSAAPVANAVISFSNISRSA AMQAPAARGQHLSGDVQQLDFPQQKLYFGPFSYQGPPPPSMHNHINLLPPTSSPVTCSMD KGKVPIIELPYGMPVDDFLVSQTTYGGAGPSIGATDAAAAAYPYTDAPSNNVATGCLMVP PMGPAFSITEPTVVAQGEGTGTGVDAGTSEKNAIVEAPNNPAPLMVLDQVAADAAMDVQE DIMFSLESLLGPDYDLLPMEDVSAPDTAAAGDAAGGSLDGEEGGMDIGWDLDLDDILVEN VNDFAFLDNLAGSE

Transcript Sequence

Transcript ID	Os08t0458600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:22492748:22497785:-1 gene:Os08g0458600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 33 description:Signal transduction response regulator, receiver region domain containing protein. (Os08t0458600-01)
Sequence	ACTCAAAACACTCATCAATGAAATCTGATCAGCGGTAGCTTTTTTTTTTTCTTTCTGAAG GAACAAAAGTGAGCAATAGCTAGCGGTACATCTCTCTCTGTGGCAATGGATCAAGCGAGG ATCTCGTTCTTCCCGGATGGTCTCCGTGTGATGATCATCGACGACGACGCAAAGGCCGTC AGAAGGGCAACGGCGACGTTGTCCCAACTGCAGTACGCAGTGGTGGCGACGCACTCCACC GCAAGCGCTGGTCTGCGTGCCCTCTCCGGCGACAACGTGGTAGAAATCCAAGCCATCCTC TGCGATGTCCACAAGGTGGTCTCCTCCGGCTTCGACTTCCGCCGCGTCGTCGAGTCCGAG CTTCGCATCCCCGTCATCTACCTTCTGTCGAAGATGGAGGAGGAGGACATGGTCGCCGGC GAGGACGCGGAGTTCCTGAACCACCTCCTGCTGACGGCGACCTACATCGTCAGGAAGCCG CTCAACCCCACCGTGATGGCCCGGCTGTGGAGGGTGGTGGCATGGCGCATGTACTGCCTG GAAGAAAGGATTCAGGCCAATGTCGCTGCCAATGCTGGCGCTGGTGGCGAAGACGACGAC GACGACGACGACGTAGTTATCGTCGAGGAGCCCCAAGTGCACTTCAAGGTGGTGAGAAGA ACGTCCGGTGGCAGCAGGAAGAGGCAGCTGACAATCAACGTCGTCGACGACGGCAACCGC GGCAGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGCAGATGCCAACCCAACCAGGATACTG CAGCACATCACTAGCAACTTACAGGAATTCCGCACGAAGCACCAGAAGAAGGACATGGCC ATCGAGCGTCCCCTCATCTCGTCGGACTCCATGTTCCTCAAAGCCATCCTCCCGACGCTC AAAATCTCACCATGCAACCCCCTGACCCTCACTGGCGGCATCGGTTCAAGCAGTGTCGCC GCGGAGGCCTTCGCTGGCGGCAGCTCTTCAGCTGCACCACTTCAAATTCCAGTTTTCCAG CAGCAATCCACCGGCAATGGCAACACGGTGATTAGCTTCAGCAACAATGCTTCACCGATG GCCATGCGTGCGCCAACCGACAATACTATGATATCGTTCAACAATGTCTCTGCTGCGCCG GTCGCCAATGCGGTGATCTCCTTCAGCAACATTTCTAGGTCTGCTGCCATGCAGGCACCA GCGGCAAGGGGGCAACATCTGTCCGGTGATGTCCAGCAGCTGGATTTTCCCCAGCAGAAG CTGTACTTTGGGCCCTTCTCCTACCAAGGGCCTCCGCCACCTTCCATGCACAACCACATC AACCTACTCCCGCCGACGTCCTCCCCTGTGACCTGCTCCATGGACAAAGGCAAGGTTCCT ATTATCGAGCTCCCATATGGGATGCCTGTGGATGACTTCCTCGTCAGTCAAACCACATAT GGCGGTGCCGGACCATCCATCGGAGCCACTGACGCTGCTGCCGCTGCGTACCCTTACACA GATGCACCGAGCAATAACGTTGCAACTGGCTGTCTCATGGTGCCACCAATGGGGCCAGCA TTCAGTATCACTGAGCCAACTGTGGTGGCCCAAGGTGAGGGCACCGGCACCGGTGTCGAC GCCGGCACATCAGAGAAGAACGCGATAGTAGAAGCACCAAACAACCCCGCGCCATTAATG GTACTGGATCAGGTTGCTGCTGATGCTGCAATGGATGTTCAAGAAGACATCATGTTCTCT TTGGAATCTCTTCTGGGGCCGGACTATGACCTGCTACCTATGGAAGACGTTAGTGCTCCG GACACCGCTGCAGCCGGTGATGCAGCTGGTGGCTCACTGGACGGAGAGGAAGGCGGCATG GACATTGGTTGGGATCTCGACCTGGATGACATCCTGGTGGAGAACGTTAATGACTTCGCG TTCCTGGACAACCTTGCCGGGAGCGAGTAGTCAGTAGTCATCTCATCGCAAATATATTAT CTCAAGTTAATTAAGCTAGAGATTAGAGAGAGGGGATGTGTGCTCAGTATGATAAAACAA CTTTTAGTCTTTGTTGCAAGTACTCTAAACATTGATGATTTTTCCTCCGTTATCATGCCA GGAATGTGAACTTTTAAAACTCCAAATTCCTATATTGCAGATATGATATTATGATGC