Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0454500-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:22277838:22279910:-1 gene:Os08g0454500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Flavonoid 7-O-methyltransferase. (Os08t0454500-00)
Sequence

ATGCCAATCAACCTATGTGCTCGTGTGCGTCTCACAGCTTCAAGTAGGGGCATCTTTGTG
CTTGGGAATTGGCTCACGAGCAGCGATGAGAACACCCCATTTGGAATGGCGCATGGCATG
GATTTCTGGGATTTCACCGGCCATGATGCCGAGTATAGCATGCTGTTCAACAAAGGGATG
GCGTCCGACAGCCACTTCGTGGTGAACATAGTCATCCATGAGTGCGCCGAGGTGTTTGTG
GGGGTAAGGTCGCTAGTTGATGTCGGTGGTAGGAATGGCGCGATGGCGAAGGCAATTGCT
GATGCCTTTCCACACATAAAGTGCTATGTTTTGGACCTCCCTCATGTTATCCATGGCACC
CCAACTGATGGTATTGTTGAGTTTGTTGCAGGGGACATGATGCACTTTGTTCCGTCAGCA
GATGTTGTGTTACTCAAGTTTGTACTACATGATTGGAGCGATGAGGATTGCGTAAGAATC
TTGACACGATGCAAACAAGCTATAACTAACAAGGAAGAAGGAGGCAAAGTGATAATTATA
GATACAGTGATTGGATCACCATCTCAACAGATACTTGAAGCTCAACTTTCAATGGATATA
TGCATGATGACGTTGACAACAGGCAAAGAACGAGAAGAGAGAGATTGGCATAAGATATTC
TTGGAGGCGGGCTTTACACGATACAAGATTATGCCCATCTTAGGGGTTAGAGCACTTATT
GAGGTTTATCCATAA

Peptide Sequence

PEP ID

Os08t0454500-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:22277838:22279910:-1 gene:Os08g0454500 transcript:Os08t0454500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Flavonoid 7-O-methyltransferase. (Os08t0454500-00)
Sequence

MPINLCARVRLTASSRGIFVLGNWLTSSDENTPFGMAHGMDFWDFTGHDAEYSMLFNKGM
ASDSHFVVNIVIHECAEVFVGVRSLVDVGGRNGAMAKAIADAFPHIKCYVLDLPHVIHGT
PTDGIVEFVAGDMMHFVPSADVVLLKFVLHDWSDEDCVRILTRCKQAITNKEEGGKVIII
DTVIGSPSQQILEAQLSMDICMMTLTTGKEREERDWHKIFLEAGFTRYKIMPILGVRALI
EVYP

Transcript Sequence

Transcript ID

Os08t0454500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:22277838:22279910:-1 gene:Os08g0454500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Flavonoid 7-O-methyltransferase. (Os08t0454500-00)
Sequence

CTTCTGCAAGCTCAGGCAGAGCTCTGGTGCCACACTTTTGGCTATCTCAAATCCATAGCA
CTCAGGTGCGCCGTAGAGCTTGGCATCCCCAACGCCATCCACCGCAATGGAGGCTCTGCT
TCACTGCCCGAGCTGCTTGGCACTCTCCCTCTCGCGGCAAACAAACGATCATGCTTGCCT
CGCCTCATGAGATTCCTAGTCTCTTTCGGAATCTTCAAAGAAGACATCTCAAGGGAGGGA
ACAACAACAACAACAAGCGTGTATCAGCTCACACCGGTATCTCGCCTCCTTGTTGATGGT
ATTGGCATGAACAGCAACACTGAGCACACATGCCAATCAACCTATGTGCTCGTGTGCGTC
TCACAGCTTCAAGTAGGGGCATCTTTGTGCTTGGGAATTGGCTCACGAGCAGCGATGAGA
ACACCCCATTTGGAATGGCGCATGGCATGGATTTCTGGGATTTCACCGGCCATGATGCCG
AGTATAGCATGCTGTTCAACAAAGGGATGGCGTCCGACAGCCACTTCGTGGTGAACATAG
TCATCCATGAGTGCGCCGAGGTGTTTGTGGGGGTAAGGTCGCTAGTTGATGTCGGTGGTA
GGAATGGCGCGATGGCGAAGGCAATTGCTGATGCCTTTCCACACATAAAGTGCTATGTTT
TGGACCTCCCTCATGTTATCCATGGCACCCCAACTGATGGTATTGTTGAGTTTGTTGCAG
GGGACATGATGCACTTTGTTCCGTCAGCAGATGTTGTGTTACTCAAGTTTGTACTACATG
ATTGGAGCGATGAGGATTGCGTAAGAATCTTGACACGATGCAAACAAGCTATAACTAACA
AGGAAGAAGGAGGCAAAGTGATAATTATAGATACAGTGATTGGATCACCATCTCAACAGA
TACTTGAAGCTCAACTTTCAATGGATATATGCATGATGACGTTGACAACAGGCAAAGAAC
GAGAAGAGAGAGATTGGCATAAGATATTCTTGGAGGCGGGCTTTACACGATACAAGATTA
TGCCCATCTTAGGGGTTAGAGCACTTATTGAGGTTTATCCATAACATATTAGATGAATAT
GT