Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0451000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:22013819:22024438:1 gene:Os08g0451000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec34-like protein family protein. (Os08t0451000-01)
Sequence	ATGGCGACGACGCCGGAGACGCTGCCCAACTCGGAGGCCGTCTCCCACGCCTACAAGTTC GCCTCCACCTGGGAGAAGAACGCGCCGCTCACGGAGCAGCAGAATGCCGCGATCGCCGCG CTCTCCCGCGCCGTGTCCGAGCGGCCGTTCCCGGCCAACCTGGAGAAAAGTTTAGTGAAG GATGGGGGTGTGGTTGTGCCAGAAAAAGAGGCTGCATTAGAGGAGGGTGCAATGGATGCA GTCTTGGTGAATACGCATCAGTTCTACAAATGGTTTTCTGAACTGGAATCAGCTATGAAA TCTGAGACGGAAGAAAAGTATCGTCTCTACGAGAGTACATTAGAGGAACGTGTTAAAACA TGTGATGGTATTCTTCAACAAGTGGATGACACACTGAACTTATTTGAAGAACTGCAATCG TTGCATTTGAGTGTTGCCACAAAGACAAAAACTTTGCACGATGCTTGCGACCAACTTTTG TTGGAGAAACAAAGGCTGATTGAGTTTGCAGAAGCACTTCGAAGTAGGTTGAACTACTTT GATGAATTGGAAAATGTCTCTACTAGCTTTTATTCTCAAACTATGAACATCGGAAATGAA CAATTTCTTCCACTTTTGAAACGGCTCGATGATTGTATTTCGTATGTTGAAAATAATCCA CAATATGCTGAATCTGCGGTGTACTTGGTTAAGTTTCGCCAACTTCAGTCTCGTGCATTA GGTATGATTCGGTCACATGTCCTGTCAATACTTAAAGCCGCTTCATCCCAGGTTCAAGCG GCGATTCGAGGTAATGGTTCAGCAAAAAATGTTGTTACAGAGGGTGTGGAAGCATCCCTT ATCTATGTTCGCTTCAAGGCAGCTGCTAGTGAGCTTAAACCAATCTTAGGTGAGATTGAA AGTAGATCTTCTAGGAAAGAATACACGCAGATTCTTTCAGAATGTCACAGCTTGTTCTGC GAACAGAGGTTATACTTGATACGAGGCATGGTGCAGCAACGAATTTCTGAATTTGCTAGA AAAGAAGCTTTGCCTTCTCTAACAAGATCTGGATGTGCCTATCTGATGGAGGCATGCCAA TTTGAGCACCAGCTTTTTGCTCACTTTTTCCCGGCATCTGCATCAGATGTTTCAAGTATT GCTCCTTTAATGGACCCACTGTGCACGTACTTGTATGATACTCTGAGGCCTAGACTGATT TATGAGGGAAGCATTGATTCTCTGTGTGAACTCGTTGACATTCTGAAGGTCGAAGTGCTA GGGGAACAACTAAGTAGACGAGGAGAATCAGTAGCTGGGCTTCGACCCATATTGCAAAGG ATACTTGCAGACGTTCATGAGCGGTTGGCCTTTTGTGCTCGGACTCATATTCGTGAGGAG ATTGCAAACTTCCGCCCTTCTGATGAAGATCTGGATTATCCTGGAAAGCTTGAGAGATCC GTAGATGCAACTACAAGTTCTAATGTTAGTGGCAACTCGGACATATATGTGACATGGTAT AGACCACTGGAGAAAACAGTGTCTTGTCTGTCAAAGCTATATCACCGCTTAGAACCTACA GTTTTTACTGGATTAGCCCAGGAAGCTGTAGAAGTTTGCTCCACATCTCTTCAGAATGCA AGCAAGGTCATTGCAAAAAAAGCAACTGCAATGGATGGACAGCTTTTCCTAATTAAGCAC CTTCTTATTTTAAGAGAACAGATTGCTCCATTTGATATTGAGTTTTCTGTCACGCATAAG GAGCTGGATTTCTCCCATTTGCTGGATCACTTAAGAAGGATCCTCAGGGGGCAGGTCTCG TTATTTGATTGGTCAAGGTCAACATCACTTGCTAGGACGTTTTCTCCCCGTGTTCTGGAG AACCAAATTGATGCCAGAAAAGAATTGGAAAAAAGCCTCAAATCTACCTGTGAAGAGTTT ATAATGTCCATTACAAAATTAGTAGTGGATCCAATGCTTTCTTTTGTTACTAAGGTAACG GCTGTCAAAGTTGTACTGTCCTCGGGTAGCCAGGGTCAGAAATTGGATTCTGTTCTGGCT AAACCCCTTAAGACTCAAGCATTTGCTTCTCCTGATAAGGTTGCGGAGCTGGTTCAAAAG GTTGGGACTGCTATTCAGCAAGATTTACCCAAAGTAATGACCATGATGAGGTTGTATTTG CAAAATCCATCTACGCGGTTGATTTTATTCAAACCAATCAAGACAAATATAGTTGAGGCT CATATACAGCTACACTCCCTTCTGAAGTCAGAATACACAGCTGACGAAATCCAATCAATT GGTATGTTGCCTATACCCGACCTCCAGTCTCAGCTCGACGCTCTTTTGTAA

Peptide Sequence

PEP ID	Os08t0451000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:22013819:22024438:1 gene:Os08g0451000 transcript:Os08t0451000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec34-like protein family protein. (Os08t0451000-01)
Sequence	MATTPETLPNSEAVSHAYKFASTWEKNAPLTEQQNAAIAALSRAVSERPFPANLEKSLVK DGGVVVPEKEAALEEGAMDAVLVNTHQFYKWFSELESAMKSETEEKYRLYESTLEERVKT CDGILQQVDDTLNLFEELQSLHLSVATKTKTLHDACDQLLLEKQRLIEFAEALRSRLNYF DELENVSTSFYSQTMNIGNEQFLPLLKRLDDCISYVENNPQYAESAVYLVKFRQLQSRAL GMIRSHVLSILKAASSQVQAAIRGNGSAKNVVTEGVEASLIYVRFKAAASELKPILGEIE SRSSRKEYTQILSECHSLFCEQRLYLIRGMVQQRISEFARKEALPSLTRSGCAYLMEACQ FEHQLFAHFFPASASDVSSIAPLMDPLCTYLYDTLRPRLIYEGSIDSLCELVDILKVEVL GEQLSRRGESVAGLRPILQRILADVHERLAFCARTHIREEIANFRPSDEDLDYPGKLERS VDATTSSNVSGNSDIYVTWYRPLEKTVSCLSKLYHRLEPTVFTGLAQEAVEVCSTSLQNA SKVIAKKATAMDGQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLDHLRRILRGQVS LFDWSRSTSLARTFSPRVLENQIDARKELEKSLKSTCEEFIMSITKLVVDPMLSFVTKVT AVKVVLSSGSQGQKLDSVLAKPLKTQAFASPDKVAELVQKVGTAIQQDLPKVMTMMRLYL QNPSTRLILFKPIKTNIVEAHIQLHSLLKSEYTADEIQSIGMLPIPDLQSQLDALL

Transcript Sequence

Transcript ID	Os08t0451000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:22013819:22024438:1 gene:Os08g0451000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec34-like protein family protein. (Os08t0451000-01)
Sequence	AGTCTTTCTCCTCTTTCTCTCTCTCTCGCAAGTCTCGATTACTACCGGGAAGGCCATTCC CAGTGCTCCGACCGCCGCGCCAATCAACCGCCGTCAGCCACCGGACAGCCGGCCGCCGCC GCCGCGCGTCCCACTTGGCCCGCATCGCAACGCCACCAGGGGACGCGACCGCCGCCTCCC CACCCCTCCGGCAACGCCCGCCCGGGGCCGCGGCCGCATCAGCCGCCCGCCGCCGGGGAC GCCCATGGCGACGACGCCGGAGACGCTGCCCAACTCGGAGGCCGTCTCCCACGCCTACAA GTTCGCCTCCACCTGGGAGAAGAACGCGCCGCTCACGGAGCAGCAGAATGCCGCGATCGC CGCGCTCTCCCGCGCCGTGTCCGAGCGGCCGTTCCCGGCCAACCTGGAGAAAAGTTTAGT GAAGGATGGGGGTGTGGTTGTGCCAGAAAAAGAGGCTGCATTAGAGGAGGGTGCAATGGA TGCAGTCTTGGTGAATACGCATCAGTTCTACAAATGGTTTTCTGAACTGGAATCAGCTAT GAAATCTGAGACGGAAGAAAAGTATCGTCTCTACGAGAGTACATTAGAGGAACGTGTTAA AACATGTGATGGTATTCTTCAACAAGTGGATGACACACTGAACTTATTTGAAGAACTGCA ATCGTTGCATTTGAGTGTTGCCACAAAGACAAAAACTTTGCACGATGCTTGCGACCAACT TTTGTTGGAGAAACAAAGGCTGATTGAGTTTGCAGAAGCACTTCGAAGTAGGTTGAACTA CTTTGATGAATTGGAAAATGTCTCTACTAGCTTTTATTCTCAAACTATGAACATCGGAAA TGAACAATTTCTTCCACTTTTGAAACGGCTCGATGATTGTATTTCGTATGTTGAAAATAA TCCACAATATGCTGAATCTGCGGTGTACTTGGTTAAGTTTCGCCAACTTCAGTCTCGTGC ATTAGGTATGATTCGGTCACATGTCCTGTCAATACTTAAAGCCGCTTCATCCCAGGTTCA AGCGGCGATTCGAGGTAATGGTTCAGCAAAAAATGTTGTTACAGAGGGTGTGGAAGCATC CCTTATCTATGTTCGCTTCAAGGCAGCTGCTAGTGAGCTTAAACCAATCTTAGGTGAGAT TGAAAGTAGATCTTCTAGGAAAGAATACACGCAGATTCTTTCAGAATGTCACAGCTTGTT CTGCGAACAGAGGTTATACTTGATACGAGGCATGGTGCAGCAACGAATTTCTGAATTTGC TAGAAAAGAAGCTTTGCCTTCTCTAACAAGATCTGGATGTGCCTATCTGATGGAGGCATG CCAATTTGAGCACCAGCTTTTTGCTCACTTTTTCCCGGCATCTGCATCAGATGTTTCAAG TATTGCTCCTTTAATGGACCCACTGTGCACGTACTTGTATGATACTCTGAGGCCTAGACT GATTTATGAGGGAAGCATTGATTCTCTGTGTGAACTCGTTGACATTCTGAAGGTCGAAGT GCTAGGGGAACAACTAAGTAGACGAGGAGAATCAGTAGCTGGGCTTCGACCCATATTGCA AAGGATACTTGCAGACGTTCATGAGCGGTTGGCCTTTTGTGCTCGGACTCATATTCGTGA GGAGATTGCAAACTTCCGCCCTTCTGATGAAGATCTGGATTATCCTGGAAAGCTTGAGAG ATCCGTAGATGCAACTACAAGTTCTAATGTTAGTGGCAACTCGGACATATATGTGACATG GTATAGACCACTGGAGAAAACAGTGTCTTGTCTGTCAAAGCTATATCACCGCTTAGAACC TACAGTTTTTACTGGATTAGCCCAGGAAGCTGTAGAAGTTTGCTCCACATCTCTTCAGAA TGCAAGCAAGGTCATTGCAAAAAAAGCAACTGCAATGGATGGACAGCTTTTCCTAATTAA GCACCTTCTTATTTTAAGAGAACAGATTGCTCCATTTGATATTGAGTTTTCTGTCACGCA TAAGGAGCTGGATTTCTCCCATTTGCTGGATCACTTAAGAAGGATCCTCAGGGGGCAGGT CTCGTTATTTGATTGGTCAAGGTCAACATCACTTGCTAGGACGTTTTCTCCCCGTGTTCT GGAGAACCAAATTGATGCCAGAAAAGAATTGGAAAAAAGCCTCAAATCTACCTGTGAAGA GTTTATAATGTCCATTACAAAATTAGTAGTGGATCCAATGCTTTCTTTTGTTACTAAGGT AACGGCTGTCAAAGTTGTACTGTCCTCGGGTAGCCAGGGTCAGAAATTGGATTCTGTTCT GGCTAAACCCCTTAAGACTCAAGCATTTGCTTCTCCTGATAAGGTTGCGGAGCTGGTTCA AAAGGTTGGGACTGCTATTCAGCAAGATTTACCCAAAGTAATGACCATGATGAGGTTGTA TTTGCAAAATCCATCTACGCGGTTGATTTTATTCAAACCAATCAAGACAAATATAGTTGA GGCTCATATACAGCTACACTCCCTTCTGAAGTCAGAATACACAGCTGACGAAATCCAATC AATTGGTATGTTGCCTATACCCGACCTCCAGTCTCAGCTCGACGCTCTTTTGTAACCGTT ATCAAGATGCAAATGCGACCCTACGTTTTGTTCGTTGAGACGGTAAATGGTATCCTGAAG TACAGTAACCCCGTTGTACCAGAGTGATCAGTGATGTTGTAAAAATGTACTATGTTACTG TGGAATGGAGCATCATTCTTGTGTGG