Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0450900-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:22012617:22013219:1 gene:Os08g0450900 gene_biotype:protein_coding transcript_biotype:protein_coding description:SANT domain, DNA binding domain containing protein. (Os08t0450900-00)
Sequence

ATGGCGGCGGACGGCGGCGACGGCAGCGGCGGCGGCAGGAAGACGCCGTGGACGCAGGAG
GAGGACGAGGCGCTGCGTCGCGCGGTGCGCGAGCACCGGCGGCAGAACTGGGCGGAGATC
GCGCTGGCGCTGCCCCGGCGCGGGCCCAAGTCGTGCCGGCTGCGGTGGTGCCAGCACCTG
TCGCCGGAGCTGGACAGCCGGGTCTTCACCGCCGAGGAGGACGCGATCATCCTCGCGCAG
CAGCGCGTGCACGGCAACAAGTGGGCCACCATCGCGCGCTGCCTCCCCGGCCGCTACGAC
AACGCCGTCAAGAACCGGTGGAACTCGGCGCTCCGCAAGCTGCTGCAAGTGCAACACGCC
AGCGGCGCCGGCTCCCCGCCGGCCGCTGCCGCCGCCGCCGCCGGAGACGACCGGGACGAT
GCCCCAGTCTGCCTCCAGCTGTTCCCCGCGAGGGCCGGGGGCGTGAAGGAGGCTGGCTTA
TTCGCCGGTGAGAAGGATGTGGAGGAGGAGGACGTGGCGACCAGCCTGACGCTGGGGTTG
CCGGTGCTGTGCGAGGCGGAGCTGGAGCTCAGGCTGGGGCCTGCGTGGCCGGCCACCGCG
TGA

Peptide Sequence

PEP ID

Os08t0450900-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:22012617:22013219:1 gene:Os08g0450900 transcript:Os08t0450900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:SANT domain, DNA binding domain containing protein. (Os08t0450900-00)
Sequence

MAADGGDGSGGGRKTPWTQEEDEALRRAVREHRRQNWAEIALALPRRGPKSCRLRWCQHL
SPELDSRVFTAEEDAIILAQQRVHGNKWATIARCLPGRYDNAVKNRWNSALRKLLQVQHA
SGAGSPPAAAAAAAGDDRDDAPVCLQLFPARAGGVKEAGLFAGEKDVEEEDVATSLTLGL
PVLCEAELELRLGPAWPATA

Transcript Sequence

Transcript ID

Os08t0450900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:22012617:22013219:1 gene:Os08g0450900 gene_biotype:protein_coding transcript_biotype:protein_coding description:SANT domain, DNA binding domain containing protein. (Os08t0450900-00)
Sequence

ATGGCGGCGGACGGCGGCGACGGCAGCGGCGGCGGCAGGAAGACGCCGTGGACGCAGGAG
GAGGACGAGGCGCTGCGTCGCGCGGTGCGCGAGCACCGGCGGCAGAACTGGGCGGAGATC
GCGCTGGCGCTGCCCCGGCGCGGGCCCAAGTCGTGCCGGCTGCGGTGGTGCCAGCACCTG
TCGCCGGAGCTGGACAGCCGGGTCTTCACCGCCGAGGAGGACGCGATCATCCTCGCGCAG
CAGCGCGTGCACGGCAACAAGTGGGCCACCATCGCGCGCTGCCTCCCCGGCCGCTACGAC
AACGCCGTCAAGAACCGGTGGAACTCGGCGCTCCGCAAGCTGCTGCAAGTGCAACACGCC
AGCGGCGCCGGCTCCCCGCCGGCCGCTGCCGCCGCCGCCGCCGGAGACGACCGGGACGAT
GCCCCAGTCTGCCTCCAGCTGTTCCCCGCGAGGGCCGGGGGCGTGAAGGAGGCTGGCTTA
TTCGCCGGTGAGAAGGATGTGGAGGAGGAGGACGTGGCGACCAGCCTGACGCTGGGGTTG
CCGGTGCTGTGCGAGGCGGAGCTGGAGCTCAGGCTGGGGCCTGCGTGGCCGGCCACCGCG
TGA