Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0448100-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:21884313:21885260:1 gene:Os08g0448100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0448100-01)
Sequence

ATGGCGTCGCCGGAGAGGCGATCGTCCACGACGACGACGTCGTCGCTCCTCGGCAGCTTT
CGGACGGCGGTCAAGAAGGTCCGGTTCCTGCTCTCCTTCAGCGCGACGCGGTGGATCCTT
TCCTCCATCGTCGGCTCGCGCGCCGGGCCGCGGCGCCGCGTCAGCTTCGGCCCGGCGGCG
CGGCCGCCTAGCCTGCTCGACTACGAGGGCAGCGCCATCGTGTCGCCGCCGGCCAGGTCG
GGGGCGCCGTCCAGGACGGCGAGCCTGGGGCCGTCGCCGGCGAGGACCGTGACGCGGACG
AGCAGCGCGGCGTCCTCGGAGCTGCTGAGGACGTCGAGCGCCGGGTCGTCGTCGTCGTCG
CCCGCCGGCGGCGGCGGCGACGACGACATCGACCGGCGAGCCGAGCTGTTCATCGCCAAC
TTCTACAAGCACATACAGATGGAGCGGCAGGTGTCGCTGCAGCTTCGGTACTTGGACAGG
ACGCCATCCAGGTGA

Peptide Sequence

PEP ID

Os08t0448100-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:21884313:21885260:1 gene:Os08g0448100 transcript:Os08t0448100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0448100-01)
Sequence

MASPERRSSTTTTSSLLGSFRTAVKKVRFLLSFSATRWILSSIVGSRAGPRRRVSFGPAA
RPPSLLDYEGSAIVSPPARSGAPSRTASLGPSPARTVTRTSSAASSELLRTSSAGSSSSS
PAGGGGDDDIDRRAELFIANFYKHIQMERQVSLQLRYLDRTPSR

Transcript Sequence

Transcript ID

Os08t0448100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:21884313:21885260:1 gene:Os08g0448100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0448100-01)
Sequence

TTGCTCTCCACAAACTTTCCATCACCACCTTTCGGGCGTTAACCAAACGCATCGTTCGTT
CGTCTCTCTCTCGCTCGGCCCGCGTTCGGTTGCTTGTCACGACTCGAAAGCCTCAACGAC
AAAGAGGAGGACAAAGTAAGCGCGGCTAAGCTTCGTGCAGGCGCGCACGCCAAGTCGTCT
TCGCCGGTGGTCAACGTCTCCACCGATCGATCGAGATGGCGTCGCCGGAGAGGCGATCGT
CCACGACGACGACGTCGTCGCTCCTCGGCAGCTTTCGGACGGCGGTCAAGAAGGTCCGGT
TCCTGCTCTCCTTCAGCGCGACGCGGTGGATCCTTTCCTCCATCGTCGGCTCGCGCGCCG
GGCCGCGGCGCCGCGTCAGCTTCGGCCCGGCGGCGCGGCCGCCTAGCCTGCTCGACTACG
AGGGCAGCGCCATCGTGTCGCCGCCGGCCAGGTCGGGGGCGCCGTCCAGGACGGCGAGCC
TGGGGCCGTCGCCGGCGAGGACCGTGACGCGGACGAGCAGCGCGGCGTCCTCGGAGCTGC
TGAGGACGTCGAGCGCCGGGTCGTCGTCGTCGTCGCCCGCCGGCGGCGGCGGCGACGACG
ACATCGACCGGCGAGCCGAGCTGTTCATCGCCAACTTCTACAAGCACATACAGATGGAGC
GGCAGGTGTCGCTGCAGCTTCGGTACTTGGACAGGACGCCATCCAGGTGATGGATTTTTC
GTACGTGGCAGGATCGATTTTTACAAAAAGTATCTCATCATCAAAAGCCAAAAAAAAAAG
AAAAGGGTATGTGGATTTAGATGGGTGTTTTTCGTTCCATCATTTCTCCACATCTTAATT
TTGGATTGTTTTCATGAGATAGATACTTTATTGATTCTTTTTATTGAGAGTTTGTAAATC
TCTATCTCTATCTCTACTATTATAAAAATTGAAGATGTTTTTATCGGT