Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0447300-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:21842124:21846897:-1 gene:Os08g0447300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to serine esterase family protein. (Os08t0447300-00)
Sequence

ATGATCGCCGCCGGCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCC
CATTCGCGGTGGCCCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCC
GCGGCCAGCGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTG
AAGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAG
GACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCAC
CTCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAG
CAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGAAGCCAGTGCAATTCGGCT
ACACAAACATTTGACGGAGTTGACCTGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCA
GTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCTAGGTGGC
CTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTAAATCTTCT
TCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATTGCTGGCTTAGAACCT
ATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGCTCCCT
TTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTT
GGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTC
CTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAA
CGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCA
ATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCT
CATATTGTCCATGTTGATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCGTTCTGAT
CTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTT
GATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAG
AGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATC
GTCTAG

Peptide Sequence

PEP ID

Os08t0447300-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:21842124:21846897:-1 gene:Os08g0447300 transcript:Os08t0447300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to serine esterase family protein. (Os08t0447300-00)
Sequence

MIAAGAASMGRATATPAHGAHSRWPRAVARLRLAFRSPAPAASGGARWIGCFRPAPPAAV
KEAKGKRPEVEKEPARGGGEDVWSAQAEAEVAQGGGFPEHLVVMVNGLVGSADDWKFAAE
QFVRRMPEKVIVHRSQCNSATQTFDGVDLMGERLANEVLSVVEQRRGVKKISFVAHSLGG
LVARYAIGRLYEPNNKTKSSSEKSRDEGERLEGFIAGLEPMNFITFASPHLGSSGNKQLP
FLCGLPFLERRASETAHLLVGRTGKHLFLTDNDDGRRPLLLQMVDDCDDIKFRSALRSFK
RRVAYANANFDHMVGWRTSSIRRQHELPKHRLLVRDEKYPHIVHVDKGATNSNEAEARSD
LYDPEEEMIRGLTQVPWERVDVSFQKSSQRLVAHNTIQVKSYWLNSDGADVINHMMDNFI
V

Transcript Sequence

Transcript ID

Os08t0447300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:21842124:21846897:-1 gene:Os08g0447300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to serine esterase family protein. (Os08t0447300-00)
Sequence

CCGCCGCCGCCGCGGCAGCTAGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCC
ACGCCGGATGATCGCCGCCGGCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCA
CGGGGCCCATTCGCGGTGGCCCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCC
GGCGCCCGCGGCCAGCGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGC
GGCGGTGAAGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGG
AGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCC
CGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGC
GGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGAAGCCAGTGCAA
TTCGGCTACACAAACATTTGACGGAGTTGACCTGATGGGTGAAAGGTTGGCAAATGAGGT
TTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCT
AGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTAA
ATCTTCTTCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATTGCTGGCTT
AGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACA
GCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTT
GCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCC
ACTCCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTC
TTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAAC
GTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAA
ATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCG
TTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGA
ACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCA
GGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAA
TTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTA
GCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCAT
AGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCC
CATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAG
TACAATGAAGCTAATAGATATTTCCTGTTGAATTGT