Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os08t0447200-01

CDS Infomation

cds chromosome:IRGSP-1.0:8:21835086:21840598:-1 gene:Os08g0447200 gene_biotype:protein_coding transcript_biotype:protein_coding description:SGT1 family protein. (Os08t0447200-01)

Sequence

ATGGCGACCTCCGCCTCCGCCTCCACCTCCAGCCCCTTCCCGTTCCCCGCCCGCCGCCCG
CCGGACGACACCCTCTTCTACGCCGTCTACTCGCTCCCCCTCCCCACCGCCCTCCCGCCG
CCGGACCTCCACGCCGCGCTCCGGTCCCTCCACCTCTCCCTCTCCTCCCACCTCGCCCCC
TTCCTCGCCTCCCACCTCTTCCACCGCGACGCCTTCGCGCTCACCATCCCGCCGCCCGAC
CACACCGCTGCCACCTCCCCCTGCGCGCTCTGCGCCTCCCCCCCCGTCCCGCACCTCCAC
GGCGCGCTCCGCTTCGGCGACTCCCTCGCCGACGAGTGGCTCGGTGTCTCCCTCCTCTTC
GAGCTCACCCGCGCGTTCCCGAGCCTCGCCGTGCGCGCGTGGGACTCCGACGGGGAGTTC
CTCCTCATCGAGGCCGCCTTCGCGCTCCCGCGGTGGCTCGACCCGGACACCGCCCCGAAC
CGCGTCTTCATCTTCCGCGGCGAGCTCCACATCCTGCCGCCGTCGCTCTTCCCCGGGACG
CCCTCCCTCGACGCCGCGCTCGCCGCCGTCCATGATGACGCCGTCGACACCCGCGCCCCC
GACGCCGTCCAGGCCGCCATACAGCGCCGCATCGCCGGGCTGCCTGAGAAGGCCTCGGAG
AACCTCCACACCGTGCGCGTCATTGTCCCGGTGCCCGTGGCGAAGGTGCTGAAGGAGGAG
CCTTGCTTGATCGCCCGCGCCGTCGAGGGGTTCTATGACCGGGACATAGACACCATGAAA
CACGCGGCGAGGATAGAGAAATTCCTCAGGGGACCTGGCGGAGAGGGGGTTGAGATGGTG
AGGACATCGGTGCGCATGACGCGGGCAATGTACGCGCAGCTCGTGCAGCAGAACTTTCAG
GCACCGAGGGGTTACCCCATGCCGAGGAGGGAGGAGGGGCCGGAGAAGTGGATGGAGGCA
GAGTTGGGGATGAAAATTGCTTGTGGGTTTGAGATGATGTATCAGGAGAGGCGGCGGGAG
GGGGAGGAAGGGAAGGGGAGCACATGGGAGGTTTACAGGAAGAGCTTGGAGGCGACAGGG
TGCTTCAATGGTCTGCTTCCTGGGTCAAAAGAGTACAAGAGGGTTATGGAGGATGCAATG
CAGTATTACAAAAGCTCGAGTTTGTTTTCACGAACAAGGGAGATACTAAGTGCTCCTGTG
CGTCGAATTGATGAAATCCTTGCCATGCCATACTCGGCTGAGGAATTTGAAGGCAGTGAC
CTTCCTCCGAGCGACGATGACTCTTGGTTGTATAATGGGGAGGATGAGTTAGCTGCGGAA
CTCTGTGCAAGGCAGCAGGAAATGGAAGAGTATGAAACTGCAAAACAATACAGAAAAAGT
CAAAGGAAAAATGTCTCAGGCAGTTCTAGCTCGCAGTCAAACGAGTTTAATCTTGGAGAG
ATTACAGAGTCCATGCAAGAATTTGTTCGCAAAATGTCAAGCTTTGAGGGAGCTGAAGTT
CCTGCAAACAGGAAAGACATGGAATCAGTGGATCTGGATGTCAACCAGTTCTTCAAGGCC
ATGGAATCTGTGCTAGGTCGTTCAAAAGATGAACCTGGCAATGAAGCCGGGTTTGATGGA
AAATCTTCATCATCTGACATAGACCTTGAAGACGATTCTGATTATGGGAGTGATTTCGGC
GAAGAATCTGGTGAGAAGGGTATGGATAATGCTTTCATGGAATCATATTCTGATGCACTG
AATAAAGAACTCAGTATGACCACTATAGAGAAAAGTTTCGCTCGTGCACCGCACCCTGAT
ACCAGCAATGAGGGTCCATCAGGTGCTGCAGATACTGATGGGGAGATGACCCCAGTTGAT
GTGGACCTGAACCTTGTTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCA
GGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAG
CCGTGA

Peptide Sequence

PEP ID

Os08t0447200-01

PEP Infomation

pep chromosome:IRGSP-1.0:8:21835086:21840598:-1 gene:Os08g0447200 transcript:Os08t0447200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SGT1 family protein. (Os08t0447200-01)

Sequence

MATSASASTSSPFPFPARRPPDDTLFYAVYSLPLPTALPPPDLHAALRSLHLSLSSHLAP
FLASHLFHRDAFALTIPPPDHTAATSPCALCASPPVPHLHGALRFGDSLADEWLGVSLLF
ELTRAFPSLAVRAWDSDGEFLLIEAAFALPRWLDPDTAPNRVFIFRGELHILPPSLFPGT
PSLDAALAAVHDDAVDTRAPDAVQAAIQRRIAGLPEKASENLHTVRVIVPVPVAKVLKEE
PCLIARAVEGFYDRDIDTMKHAARIEKFLRGPGGEGVEMVRTSVRMTRAMYAQLVQQNFQ
APRGYPMPRREEGPEKWMEAELGMKIACGFEMMYQERRREGEEGKGSTWEVYRKSLEATG
CFNGLLPGSKEYKRVMEDAMQYYKSSSLFSRTREILSAPVRRIDEILAMPYSAEEFEGSD
LPPSDDDSWLYNGEDELAAELCARQQEMEEYETAKQYRKSQRKNVSGSSSSQSNEFNLGE
ITESMQEFVRKMSSFEGAEVPANRKDMESVDLDVNQFFKAMESVLGRSKDEPGNEAGFDG
KSSSSDIDLEDDSDYGSDFGEESGEKGMDNAFMESYSDALNKELSMTTIEKSFARAPHPD
TSNEGPSGAADTDGEMTPVDVDLNLVESFLNSYSSQQGLPGPASNLLGLMGVKVPPDGKK
P

Transcript Sequence

Transcript ID

Os08t0447200-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:8:21835086:21840598:-1 gene:Os08g0447200 gene_biotype:protein_coding transcript_biotype:protein_coding description:SGT1 family protein. (Os08t0447200-01)

Sequence

ACCGGAGTCTCCCTAACTAACTAAACCCAAACCCCGAACTCGCCACCGCCTGTCCGCCTC
CAGAGTCCCAACCGCCGCCCTCGCCGTCGTCTCGTCTCGTCTCGCCCGCCTCCATGGCGA
CCTCCGCCTCCGCCTCCACCTCCAGCCCCTTCCCGTTCCCCGCCCGCCGCCCGCCGGACG
ACACCCTCTTCTACGCCGTCTACTCGCTCCCCCTCCCCACCGCCCTCCCGCCGCCGGACC
TCCACGCCGCGCTCCGGTCCCTCCACCTCTCCCTCTCCTCCCACCTCGCCCCCTTCCTCG
CCTCCCACCTCTTCCACCGCGACGCCTTCGCGCTCACCATCCCGCCGCCCGACCACACCG
CTGCCACCTCCCCCTGCGCGCTCTGCGCCTCCCCCCCCGTCCCGCACCTCCACGGCGCGC
TCCGCTTCGGCGACTCCCTCGCCGACGAGTGGCTCGGTGTCTCCCTCCTCTTCGAGCTCA
CCCGCGCGTTCCCGAGCCTCGCCGTGCGCGCGTGGGACTCCGACGGGGAGTTCCTCCTCA
TCGAGGCCGCCTTCGCGCTCCCGCGGTGGCTCGACCCGGACACCGCCCCGAACCGCGTCT
TCATCTTCCGCGGCGAGCTCCACATCCTGCCGCCGTCGCTCTTCCCCGGGACGCCCTCCC
TCGACGCCGCGCTCGCCGCCGTCCATGATGACGCCGTCGACACCCGCGCCCCCGACGCCG
TCCAGGCCGCCATACAGCGCCGCATCGCCGGGCTGCCTGAGAAGGCCTCGGAGAACCTCC
ACACCGTGCGCGTCATTGTCCCGGTGCCCGTGGCGAAGGTGCTGAAGGAGGAGCCTTGCT
TGATCGCCCGCGCCGTCGAGGGGTTCTATGACCGGGACATAGACACCATGAAACACGCGG
CGAGGATAGAGAAATTCCTCAGGGGACCTGGCGGAGAGGGGGTTGAGATGGTGAGGACAT
CGGTGCGCATGACGCGGGCAATGTACGCGCAGCTCGTGCAGCAGAACTTTCAGGCACCGA
GGGGTTACCCCATGCCGAGGAGGGAGGAGGGGCCGGAGAAGTGGATGGAGGCAGAGTTGG
GGATGAAAATTGCTTGTGGGTTTGAGATGATGTATCAGGAGAGGCGGCGGGAGGGGGAGG
AAGGGAAGGGGAGCACATGGGAGGTTTACAGGAAGAGCTTGGAGGCGACAGGGTGCTTCA
ATGGTCTGCTTCCTGGGTCAAAAGAGTACAAGAGGGTTATGGAGGATGCAATGCAGTATT
ACAAAAGCTCGAGTTTGTTTTCACGAACAAGGGAGATACTAAGTGCTCCTGTGCGTCGAA
TTGATGAAATCCTTGCCATGCCATACTCGGCTGAGGAATTTGAAGGCAGTGACCTTCCTC
CGAGCGACGATGACTCTTGGTTGTATAATGGGGAGGATGAGTTAGCTGCGGAACTCTGTG
CAAGGCAGCAGGAAATGGAAGAGTATGAAACTGCAAAACAATACAGAAAAAGTCAAAGGA
AAAATGTCTCAGGCAGTTCTAGCTCGCAGTCAAACGAGTTTAATCTTGGAGAGATTACAG
AGTCCATGCAAGAATTTGTTCGCAAAATGTCAAGCTTTGAGGGAGCTGAAGTTCCTGCAA
ACAGGAAAGACATGGAATCAGTGGATCTGGATGTCAACCAGTTCTTCAAGGCCATGGAAT
CTGTGCTAGGTCGTTCAAAAGATGAACCTGGCAATGAAGCCGGGTTTGATGGAAAATCTT
CATCATCTGACATAGACCTTGAAGACGATTCTGATTATGGGAGTGATTTCGGCGAAGAAT
CTGGTGAGAAGGGTATGGATAATGCTTTCATGGAATCATATTCTGATGCACTGAATAAAG
AACTCAGTATGACCACTATAGAGAAAAGTTTCGCTCGTGCACCGCACCCTGATACCAGCA
ATGAGGGTCCATCAGGTGCTGCAGATACTGATGGGGAGATGACCCCAGTTGATGTGGACC
TGAACCTTGTTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAG
CTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGAT
CTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGA
TATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTC
AAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGT
CTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCT
GTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCAT
GGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCA
TTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAACATGTCTTTTGAG
ATCTGACATGTATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGA
GGCATGAACAAACTTCAGCTACCTAACATAAACTGTTCTGTACTCG