Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0447000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:21818095:21823157:-1 gene:Os08g0447000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-3-phosphoglycerate dehydrogenase. (Os08t0447000-01)
Sequence	ATGGCAACCGCCGCCGCCGCCTCACGCGCCGCCCTCTCAAGGCCTCACGCCGCCGCCGCC GCGGCGCGCGCGAGCCCCGCCGCGGGGGCGCGGGTGACGCTCCCGCGGCGCCGAAGCGTC CGATCCGCGGTGATCTCGTCGTCGGCGTCCGCGGCGGCGGTGGCGGCGTCGGAGCCGGCG GCGGGGAGGGTGACGCTGGGCGCGGGGACGGACGGGGCGCTGTGGCCGAAGCCGGCGGTG CTGGTGGCGGAGAAGCTGAGCGAGGCCGGGCTGGCGGTGCTGCGCGGGTTCGCGGACGTG GAGTGCGCGTACGGGATGTCCCCCGCGGAGCTCCTCGCCAAGGTGGCGCAGTTCGACGCG CTCATCGTGCGCAGCGGCACCAAGGTGACGAGGGAGGTGCTGGAGGCCGGGCGCGGGCGG CTGCGCGTGGTGGGCCGCGCCGGCGTCGGGATCGACAACGTCGACCTCCAGGCCGCCACC GAGGCCGGCTGCCTCGTCGTCAACGCCCCCACCGCCAACACCGTCGCCGCCGCCGAGCAC GGCATCGCGCTCCTCGCCTCCATGGCGCGCAACGTCTCCCAGGCCGACGCCGCCCTCAAG GCCGGGAAATGGCAAAGAACCAAGTACGTTGGAGTTTCTCTGGTCGGGAAGACACTTGCG GTAATGGGCTTTGGCAAGGTTGGTTCAGAGGTAGCCAGGCGGGCGAAAGGGCTCGGTATG CATGTGATTGCTCATGATCCGTACGCCCCTGCCGATAGGGCTCGTGCCATTGGAGCTGAA CTGGTCTCTTTCGATGAGGCCATTGGCAGAGCCGACTTCATCTCCCTTCACATGCCTCTC ACCCCAGCAACATCCAAGGTCTTCAACGACGAATCCTTTTCTAGGATGAAGAATGGAGTT CGGATCATCAATGTGGCCAGGGGTGGAGTGATCGACGAAGATGCTCTTGTCAGAGCCCTT GACTCTGGCAAAGTTGCTCAGGCAGCCCTTGATGTCTTCACTGAGGAGCCCCCAGCCAAG GACAGCAAGCTAGTCCTCCATGAGAATGTTACTGTTACACCCCATCTTGGAGCAAGTACA GTGGAGGCCCAGGAGGGCGTCGCTATCGAGATAGCCGAAGCTGTCGTCGGTGCACTGAGA GGTGAGCTCGCAGCAACAGCCGTGAATGCTCCCATGGTCCCAGCTGAGGTCATGTCAGAG CTTGCCCCGTATGTTTCACTGGCAGAGAAGCTGGGCAAGCTGGCGGTGCAGCTCGTCGCA GGCGAGAGCGGCGGCATCAAGGGCGTCAAGGTGGTGTACACCACGGCCCGTGGCCCGGAC GACCTCGACACGAGGCTCCTCCGCGCCATGGTGACCAAGGGCATCGTGGAGCCCGTGTCG AGCACGTTCGTCAACCTGGTGAACGCCGACTACACGGCGAAGCAGCGCGGCCTGCGCATC ACCGAGGAGCGGGTCTCCCACGAGAGCCCCGCCGCGGAGGCGCCGCTGGAGTCCATCCAG GTGAGGCTCTCACACGTCCAGTCCAAGTTCGCCGGCGCCATCAGCGACGGCGGCGACATC GTCCTCGAGGGGAGGGTCAAGTACGGCGTGCCGCACCTCACCGTCGTCGGGCCCTACGAG GTGGACGTCAGCCTGGAGGGCAACCTGATCCTGTGCCGGCAGATCGACCAGCCCGGCATG ATCGGCAAGGTCGGCAACATCCTCGGCCAGACGAACGTCAACATCAGCTTCATGAGCGTC GGCCGGACCTTCCGCGGCAAGCAGGCCATCATGGCCATCGGCGTCGACGAGGAGCCCGAC AAGGAGACCCTCGAGCACATCGGCCACATCCCGGCGATCGAGGAGTTCGTCTTCCTCGAG CTATGA

Peptide Sequence

PEP ID	Os08t0447000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:21818095:21823157:-1 gene:Os08g0447000 transcript:Os08t0447000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-3-phosphoglycerate dehydrogenase. (Os08t0447000-01)
Sequence	MATAAAASRAALSRPHAAAAAARASPAAGARVTLPRRRSVRSAVISSSASAAAVAASEPA AGRVTLGAGTDGALWPKPAVLVAEKLSEAGLAVLRGFADVECAYGMSPAELLAKVAQFDA LIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEH GIALLASMARNVSQADAALKAGKWQRTKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM HVIAHDPYAPADRARAIGAELVSFDEAIGRADFISLHMPLTPATSKVFNDESFSRMKNGV RIINVARGGVIDEDALVRALDSGKVAQAALDVFTEEPPAKDSKLVLHENVTVTPHLGAST VEAQEGVAIEIAEAVVGALRGELAATAVNAPMVPAEVMSELAPYVSLAEKLGKLAVQLVA GESGGIKGVKVVYTTARGPDDLDTRLLRAMVTKGIVEPVSSTFVNLVNADYTAKQRGLRI TEERVSHESPAAEAPLESIQVRLSHVQSKFAGAISDGGDIVLEGRVKYGVPHLTVVGPYE VDVSLEGNLILCRQIDQPGMIGKVGNILGQTNVNISFMSVGRTFRGKQAIMAIGVDEEPD KETLEHIGHIPAIEEFVFLEL

Transcript Sequence

Transcript ID	Os08t0447000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21818095:21823157:-1 gene:Os08g0447000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-3-phosphoglycerate dehydrogenase. (Os08t0447000-01)
Sequence	ACGCAAAAATCCTACGCAAAAAAAAAAAAAGAAAAAAAACACACCATCACTCTCTCGCTC CCCATCGATCGGAGAAAATGGCAACCGCCGCCGCCGCCTCACGCGCCGCCCTCTCAAGGC CTCACGCCGCCGCCGCCGCGGCGCGCGCGAGCCCCGCCGCGGGGGCGCGGGTGACGCTCC CGCGGCGCCGAAGCGTCCGATCCGCGGTGATCTCGTCGTCGGCGTCCGCGGCGGCGGTGG CGGCGTCGGAGCCGGCGGCGGGGAGGGTGACGCTGGGCGCGGGGACGGACGGGGCGCTGT GGCCGAAGCCGGCGGTGCTGGTGGCGGAGAAGCTGAGCGAGGCCGGGCTGGCGGTGCTGC GCGGGTTCGCGGACGTGGAGTGCGCGTACGGGATGTCCCCCGCGGAGCTCCTCGCCAAGG TGGCGCAGTTCGACGCGCTCATCGTGCGCAGCGGCACCAAGGTGACGAGGGAGGTGCTGG AGGCCGGGCGCGGGCGGCTGCGCGTGGTGGGCCGCGCCGGCGTCGGGATCGACAACGTCG ACCTCCAGGCCGCCACCGAGGCCGGCTGCCTCGTCGTCAACGCCCCCACCGCCAACACCG TCGCCGCCGCCGAGCACGGCATCGCGCTCCTCGCCTCCATGGCGCGCAACGTCTCCCAGG CCGACGCCGCCCTCAAGGCCGGGAAATGGCAAAGAACCAAGTACGTTGGAGTTTCTCTGG TCGGGAAGACACTTGCGGTAATGGGCTTTGGCAAGGTTGGTTCAGAGGTAGCCAGGCGGG CGAAAGGGCTCGGTATGCATGTGATTGCTCATGATCCGTACGCCCCTGCCGATAGGGCTC GTGCCATTGGAGCTGAACTGGTCTCTTTCGATGAGGCCATTGGCAGAGCCGACTTCATCT CCCTTCACATGCCTCTCACCCCAGCAACATCCAAGGTCTTCAACGACGAATCCTTTTCTA GGATGAAGAATGGAGTTCGGATCATCAATGTGGCCAGGGGTGGAGTGATCGACGAAGATG CTCTTGTCAGAGCCCTTGACTCTGGCAAAGTTGCTCAGGCAGCCCTTGATGTCTTCACTG AGGAGCCCCCAGCCAAGGACAGCAAGCTAGTCCTCCATGAGAATGTTACTGTTACACCCC ATCTTGGAGCAAGTACAGTGGAGGCCCAGGAGGGCGTCGCTATCGAGATAGCCGAAGCTG TCGTCGGTGCACTGAGAGGTGAGCTCGCAGCAACAGCCGTGAATGCTCCCATGGTCCCAG CTGAGGTCATGTCAGAGCTTGCCCCGTATGTTTCACTGGCAGAGAAGCTGGGCAAGCTGG CGGTGCAGCTCGTCGCAGGCGAGAGCGGCGGCATCAAGGGCGTCAAGGTGGTGTACACCA CGGCCCGTGGCCCGGACGACCTCGACACGAGGCTCCTCCGCGCCATGGTGACCAAGGGCA TCGTGGAGCCCGTGTCGAGCACGTTCGTCAACCTGGTGAACGCCGACTACACGGCGAAGC AGCGCGGCCTGCGCATCACCGAGGAGCGGGTCTCCCACGAGAGCCCCGCCGCGGAGGCGC CGCTGGAGTCCATCCAGGTGAGGCTCTCACACGTCCAGTCCAAGTTCGCCGGCGCCATCA GCGACGGCGGCGACATCGTCCTCGAGGGGAGGGTCAAGTACGGCGTGCCGCACCTCACCG TCGTCGGGCCCTACGAGGTGGACGTCAGCCTGGAGGGCAACCTGATCCTGTGCCGGCAGA TCGACCAGCCCGGCATGATCGGCAAGGTCGGCAACATCCTCGGCCAGACGAACGTCAACA TCAGCTTCATGAGCGTCGGCCGGACCTTCCGCGGCAAGCAGGCCATCATGGCCATCGGCG TCGACGAGGAGCCCGACAAGGAGACCCTCGAGCACATCGGCCACATCCCGGCGATCGAGG AGTTCGTCTTCCTCGAGCTATGATGAACAGCAGCAGCAGCAGCAGCAGCTCGTCGGATTC AAGTAGGTTAAGCTAAGCTAAGTAGCAGCACGTAATTTGGGCCAAGTGGCAACTTGGGGG CTTCTGCATTTTTTCCTGTCACGAGTAAGTATATATGTGATCATGTGAAGGGGTGCCTTC GCTTGGCCCCTGCTTAAATAAGCAGTTAAGCACGGTGTATGTCTATGTACGTATGTGTAA CTGCGTATTATTATTGATGAATGCTTGTGCTGTATCAGACATATATTGTACTGCTTGATG CTATGAAAATAGTCGCTAGTTCTAA