Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0445000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:21700257:21702424:1 gene:Os08g0445000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL5A. (Os08t0445000-01)
Sequence	ATGAGCCACTACACAATGCATGCGCACATCAACTACACCGCCCTGCCGCCGACGTCGCCG CTGCAGCTCCCGCTTCCGTACCTCCCGCCGCCTCCTCCGCCGCCGCAGCCGCCATTGCTG CAGCTCCAGCCGCCGCCGCCGCCGTCGTCGCCGGTGTCATTTGACACGGCGTTCCAGAGC AGGATCAGCCCTAGCATCCTGCTGATAATCTTGATCTTGGCTGTTATTTTCTTCGTCTCC GGGCTCCTGCATCTGCTCGTCCGGTTCATCCTCCGCCCGGCGCCGCGTGACGCCGGCGAC GCCGACAGCGGCGACGCGAACGTGACCGCCTTCCAGGGGCAGCTCCAGCAGCTGTTCCAC CTCCACGACGCCGGCGTGGACCAGTCCTTCATCGACACGCTGCCGGTGTTCCTCTACGGC GCCGTCGTCGGCGCCGGCAGGAAGGACCCGTTCGACTGCGCGGTCTGCCTCTGCGAGTTC GCCGACGACGACCGCCTCCGGCTCCTCCCCAAGTGCAGCCACGCCTTCCACGTCGACTGC ATCGACACGTGGCTGCTGTCGCACTCCACCTGCCCGCTCTGCCGCCGCAGCCTCCTCGCC GACTTCTCCCCCTACGGCGGTGGCTGCAGCCCGCTGCTGTTCGTGCTCGAGTCCGGCTCG GAGGGCTCCATCTCCGATCGCCTCGACGCGGCGTCGTCGGCTCATCTCAGCCTCGTCATG GAGCAGGAGGAAGAAGCAGAGCCGGAACAGAAGCATGCAGAGGCGGCGGAGAAGGCGGAC GAGGTGGTCGTCTCCGTCAAGCTTGGCAAGTTTCGGAGTCAGGCCACCGAAGTCGCCGCC GGCGGCGGCTGCGGCGGCAGCAGCAGCGCCAACCCCGAGCAGGACGTGCGGCGTTGCTAC TCCATGGGGACGTACGAGTACGTCATGGACGAGAGGTCTCTGCTCCGCGTCGCCGTGAAG CCGCCGGCCAAGAAGCGCCCCACGACGCAGATGCCGGGCCACCGGGTCGCCATGTCGGAG TGCGACTGCCACTCCAAGCGGGAGAGCTTCCGCGGCCTCGACGCGCTGCCCGGCGGCAAG CTCGCGCAGGCGCAGCCGCCGAAGCCGCCGGCCAAGGTGGGGAAGAAGGAGAGCTTCTCC TTCTCCAAGATATGGATGCGCGGCGCGCCGCGGATCAGGAAGGACGGCGCGTCCTCCCGG CGCGCGTCGTCGTTCCGGCTCTCCTCCGTGCTGCAGCGCGCGGCGAGCGACGTCGGGGCA ACGGCGGCGCCGAAGCCGCTGCGCCCGGACGTCGTGAGCCCCGTCACGGAGTCGGAGTAC AACGTGTCGGCGTGGGACAAGAGCGAGAAGAGCGCGAGCGGCAGCGTCGCGGACTGGGAC CTCGAGTCCGCCGCCGCCACGGCGGCCGTCCCCGGCGCAGGCGCCGGCAACGGGCTCAGC TCGAGGGCCGACGAGGCGCCGTCGTTCGCGCGGCGGACGCTGCTGTGGATCCGAGGACAC CTGTGA

Peptide Sequence

PEP ID	Os08t0445000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:21700257:21702424:1 gene:Os08g0445000 transcript:Os08t0445000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL5A. (Os08t0445000-01)
Sequence	MSHYTMHAHINYTALPPTSPLQLPLPYLPPPPPPPQPPLLQLQPPPPPSSPVSFDTAFQS RISPSILLIILILAVIFFVSGLLHLLVRFILRPAPRDAGDADSGDANVTAFQGQLQQLFH LHDAGVDQSFIDTLPVFLYGAVVGAGRKDPFDCAVCLCEFADDDRLRLLPKCSHAFHVDC IDTWLLSHSTCPLCRRSLLADFSPYGGGCSPLLFVLESGSEGSISDRLDAASSAHLSLVM EQEEEAEPEQKHAEAAEKADEVVVSVKLGKFRSQATEVAAGGGCGGSSSANPEQDVRRCY SMGTYEYVMDERSLLRVAVKPPAKKRPTTQMPGHRVAMSECDCHSKRESFRGLDALPGGK LAQAQPPKPPAKVGKKESFSFSKIWMRGAPRIRKDGASSRRASSFRLSSVLQRAASDVGA TAAPKPLRPDVVSPVTESEYNVSAWDKSEKSASGSVADWDLESAAATAAVPGAGAGNGLS SRADEAPSFARRTLLWIRGHL

Transcript Sequence

Transcript ID	Os08t0445000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21700257:21702424:1 gene:Os08g0445000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL5A. (Os08t0445000-01)
Sequence	CTCTCTCTCCCCTTCTCTTCTCCCTCTCGATCTCGACATACACTACACACCCTGTTCTTG CAGTACGCCAATTAAACCACCACCTCGTTCCTTTCCCTCATCTGCAAAGATCAAGCTCCA CCGGAGTTGACGTACGAGGATGATGATGATGATGAGTTCTCTCTTCACTTGCGTCGTCGC CTCCATTTCGCGGAGGAAGAGGAGATGCGCTGCGACGAGAGCCTAATTAAGGCCACGCCG CCATTGTTGGTGTTGACTGGTGAGCTCGTCGTCGTCGTCGCCGTCGTACCTCCTCCCCGT TGTTCTTCCCTCGCTTGCACGCCGCCGCCGCCATGAGCCACTACACAATGCATGCGCACA TCAACTACACCGCCCTGCCGCCGACGTCGCCGCTGCAGCTCCCGCTTCCGTACCTCCCGC CGCCTCCTCCGCCGCCGCAGCCGCCATTGCTGCAGCTCCAGCCGCCGCCGCCGCCGTCGT CGCCGGTGTCATTTGACACGGCGTTCCAGAGCAGGATCAGCCCTAGCATCCTGCTGATAA TCTTGATCTTGGCTGTTATTTTCTTCGTCTCCGGGCTCCTGCATCTGCTCGTCCGGTTCA TCCTCCGCCCGGCGCCGCGTGACGCCGGCGACGCCGACAGCGGCGACGCGAACGTGACCG CCTTCCAGGGGCAGCTCCAGCAGCTGTTCCACCTCCACGACGCCGGCGTGGACCAGTCCT TCATCGACACGCTGCCGGTGTTCCTCTACGGCGCCGTCGTCGGCGCCGGCAGGAAGGACC CGTTCGACTGCGCGGTCTGCCTCTGCGAGTTCGCCGACGACGACCGCCTCCGGCTCCTCC CCAAGTGCAGCCACGCCTTCCACGTCGACTGCATCGACACGTGGCTGCTGTCGCACTCCA CCTGCCCGCTCTGCCGCCGCAGCCTCCTCGCCGACTTCTCCCCCTACGGCGGTGGCTGCA GCCCGCTGCTGTTCGTGCTCGAGTCCGGCTCGGAGGGCTCCATCTCCGATCGCCTCGACG CGGCGTCGTCGGCTCATCTCAGCCTCGTCATGGAGCAGGAGGAAGAAGCAGAGCCGGAAC AGAAGCATGCAGAGGCGGCGGAGAAGGCGGACGAGGTGGTCGTCTCCGTCAAGCTTGGCA AGTTTCGGAGTCAGGCCACCGAAGTCGCCGCCGGCGGCGGCTGCGGCGGCAGCAGCAGCG CCAACCCCGAGCAGGACGTGCGGCGTTGCTACTCCATGGGGACGTACGAGTACGTCATGG ACGAGAGGTCTCTGCTCCGCGTCGCCGTGAAGCCGCCGGCCAAGAAGCGCCCCACGACGC AGATGCCGGGCCACCGGGTCGCCATGTCGGAGTGCGACTGCCACTCCAAGCGGGAGAGCT TCCGCGGCCTCGACGCGCTGCCCGGCGGCAAGCTCGCGCAGGCGCAGCCGCCGAAGCCGC CGGCCAAGGTGGGGAAGAAGGAGAGCTTCTCCTTCTCCAAGATATGGATGCGCGGCGCGC CGCGGATCAGGAAGGACGGCGCGTCCTCCCGGCGCGCGTCGTCGTTCCGGCTCTCCTCCG TGCTGCAGCGCGCGGCGAGCGACGTCGGGGCAACGGCGGCGCCGAAGCCGCTGCGCCCGG ACGTCGTGAGCCCCGTCACGGAGTCGGAGTACAACGTGTCGGCGTGGGACAAGAGCGAGA AGAGCGCGAGCGGCAGCGTCGCGGACTGGGACCTCGAGTCCGCCGCCGCCACGGCGGCCG TCCCCGGCGCAGGCGCCGGCAACGGGCTCAGCTCGAGGGCCGACGAGGCGCCGTCGTTCG CGCGGCGGACGCTGCTGTGGATCCGAGGACACCTGTGAAATGATCCATCCATGGAAGCAT CATAGCTCTTCGTTCTTCTTGTGCATTCCCGCCATTAGATTGATTCATTCATTCACGCGG AGAGTGTGGAGTGGAATCGAAGAAATTCACGAGAAATTTGTGTTGAACGATCTGTGAAGT GAATACTACACGGTAAAGAATTTAACTACTATTGTTTGCAGAGCATTGGAAATCTTGTGT CATTCTGTGTAGCTTGTACTTTGCATTTACTTGTTTTCAACTGTACATTGCTCCAGCAGC AAGGGTTTTCTTCAGGTTCAGGGTAAATTTCTGGTCTGAAACTGAAACATCACAAAAAAT CGAAATGT