Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0442700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:21578164:21583612:-1 gene:Os08g0442700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COMMISSURAL VEIN EXCESSIVE1 description:Similar to SERK1 (Fragment). (Os08t0442700-01);Similar to predicted protein. (Os08t0442700-02)
Sequence	ATGGCCTCCAACCTCTTCCTCCTCCTCTTCTTCCTCGTCGTCTCCTACGCGCCGTTCCTC GCCTTCTCCTCCGAGCCCCTCAACCCTGAAGTGGAGGCGCTGATCGCCATCAGGCAGGGG CTGGTCGACCCGCACGGCGTGCTGAACAACTGGGACGAGGACTCCGTCGACCCCTGCAGC TGGGCCATGGTCACCTGCTCCGCCCACAACCTCGTCATCGGCCTGGGAGCGCCCAGCCAG GGATTGTCGGGGACCCTGTCCGGCAGGATCGCCAACCTCACCAATCTTGAACAAGTGCTG CTGCAGAACAACAACATCACCGGCCGGCTGCCGCCGGAGCTGGGCGCGCTGCCGAGGCTG CAGACGCTCGACCTCTCCAACAACCGCTTCTCCGGCCGCGTCCCCGACACGCTCGGCCGC CTCTCCACCCTCCGATACCTGAGGCTAAACAACAACAGCTTGTCCGGGGCGTTCCCGTCG TCGCTGGCCAAGATCCCACAGCTCTCCTTCCTGGACTTGTCCTACAACAACCTCACTGGC CCTGTTCCTCACTTCCCCACAAGAACATTCAACGTCGTGGGCAATCCAATGATATGCGGG AGCAGCAGCGGCAGCCATGCGGGGAACGCGAACGCAGCGGAGTGCGCCACCGTGGTCGCC CCGGTCACCGTGCCATTCCCGCTGGACTCCACTCCGAGCAGCAGCAGCAGGGCGGCAGCG GCAGCGGTGGGGAGGTCAAAGGGTGGAGGAGGCGCCGCGCGGTTGCCGATCGGAGTAGGG ACAAGCCTTGGCGCCTCCGCGCTTGTGCTCCTCGCCGTCTCCTGCTTTCTCTGGAGGCGC AGGCGCCGGCACCGCTGCCTCCTCTCGGGCCCCTCCTCCGTCCTCGGCATCCTCGAGAAG GGGAGAGACGTGGAGGATGGGGGAGGAGGGGAGGTGATGGCGAGGCTGGGGAACGTGAGG CAGTTCGGGCTGAGGGAGCTGCACGCGGCGACGGACGGGTTCAGCGCGAGGAACATACTG GGGAAAGGAGGGTTCGGGGACGTGTACCGGGGGAGGCTCTCCGACGGCACGGTCGTGGCG GTGAAGCGGCTCAAGGACCCGACCGCGTCCGGGGAGGCGCAGTTCCGGACGGAGGTGGAG ATGATCAGCCTCGCCGTGCACCGCCACCTCCTCCGCCTCGTCGGCTTCTGCGCCGCGGCC TCCGGCGAGCGCCTCCTCGTCTACCCCTACATGCCCAACGGCAGCGTCGCCTCCCGCCTT CGAGGGAAGCCGCCGCTGGACTGGCAGACGAGGAAGCGGATCGCGGTGGGGACGGCGAGG GGATTGCTGTACCTGCACGAGCAGTGCGACCCAAAGATCATCCACCGCGACGTGAAGGCC GCGAACGTGCTGCTGGACGAGTGCCACGAGGCCGTCGTCGGCGACTTCGGGCTCGCCAAG CTGCTCGACCACGGCGACTCCCACGTCACCACGGCGGTGCGCGGCACGGTGGGGCACATC GCGCCGGAGTACCTCTCCACGGGGCAGTCGTCGGAGAAGACCGACGTGTTCGGCTTCGGC ATCCTGCTGCTCGAGCTCGTCACCGGCCAGCGCGCGCTCGAGGTCGGCAAGGGCTCCGGC GTCATCCAGCACCAGAAGGGCGTCATGCTCGATTGGGTGAGGAAGGTGCACCAAGAGAAG CTGCATGACTTGCTAGTGGACCAAGATTTGGGGCCTCACTACGACAGGATAGAGGTGGCG GAGATGGTGCAGGTGGCGCTGCTCTGCACCCAGTTCCAGCCGTCTCACCGGCCGAGGATG TCGGAGGTGGTCCGGATGCTGGAGGGAGACGGGCTCGCCGAGAAATGGGAGGCCAACCAC CGGCCGGCGGCGATGGCGGCGGCGGCGGCGCCCCATGAGCTCGGCTACGACCACCGCAAC GACTCCAACGGCTCCGTCTTCTTCAACGACTTCCACGACAACGACAGCAGCCTTAGCAGC GACGAGGTGCGGTCCATCGACATGGTAGAGGAGATGGAGCTGTCAGGGCCAAGGTAG

Peptide Sequence

PEP ID	Os08t0442700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:21578164:21583612:-1 gene:Os08g0442700 transcript:Os08t0442700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COMMISSURAL VEIN EXCESSIVE1 description:Similar to SERK1 (Fragment). (Os08t0442700-01);Similar to predicted protein. (Os08t0442700-02)
Sequence	MASNLFLLLFFLVVSYAPFLAFSSEPLNPEVEALIAIRQGLVDPHGVLNNWDEDSVDPCS WAMVTCSAHNLVIGLGAPSQGLSGTLSGRIANLTNLEQVLLQNNNITGRLPPELGALPRL QTLDLSNNRFSGRVPDTLGRLSTLRYLRLNNNSLSGAFPSSLAKIPQLSFLDLSYNNLTG PVPHFPTRTFNVVGNPMICGSSSGSHAGNANAAECATVVAPVTVPFPLDSTPSSSSRAAA AAVGRSKGGGGAARLPIGVGTSLGASALVLLAVSCFLWRRRRRHRCLLSGPSSVLGILEK GRDVEDGGGGEVMARLGNVRQFGLRELHAATDGFSARNILGKGGFGDVYRGRLSDGTVVA VKRLKDPTASGEAQFRTEVEMISLAVHRHLLRLVGFCAAASGERLLVYPYMPNGSVASRL RGKPPLDWQTRKRIAVGTARGLLYLHEQCDPKIIHRDVKAANVLLDECHEAVVGDFGLAK LLDHGDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVTGQRALEVGKGSG VIQHQKGVMLDWVRKVHQEKLHDLLVDQDLGPHYDRIEVAEMVQVALLCTQFQPSHRPRM SEVVRMLEGDGLAEKWEANHRPAAMAAAAAPHELGYDHRNDSNGSVFFNDFHDNDSSLSS DEVRSIDMVEEMELSGPR

Transcript Sequence

Transcript ID	Os08t0442700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21578164:21583612:-1 gene:Os08g0442700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COMMISSURAL VEIN EXCESSIVE1 description:Similar to SERK1 (Fragment). (Os08t0442700-01);Similar to predicted protein. (Os08t0442700-02)
Sequence	GACGGCTGATTGCCTGCCTGCCTCCCCTCACCCCTGCTTCTCCTTCTCCCTCCTTCTCAC TTTTCTTCCTCTCGGGCGCCTCTCCTCTCCATCATTCCTCCCACTGCTCCGCTCCCCCAT TCCAATGGCCTCCAACCTCTTCCTCCTCCTCTTCTTCCTCGTCGTCTCCTACGCGCCGTT CCTCGCCTTCTCCTCCGAGCCCCTCAACCCTGAAGTGGAGGCGCTGATCGCCATCAGGCA GGGGCTGGTCGACCCGCACGGCGTGCTGAACAACTGGGACGAGGACTCCGTCGACCCCTG CAGCTGGGCCATGGTCACCTGCTCCGCCCACAACCTCGTCATCGGCCTGGGAGCGCCCAG CCAGGGATTGTCGGGGACCCTGTCCGGCAGGATCGCCAACCTCACCAATCTTGAACAAGT GCTGCTGCAGAACAACAACATCACCGGCCGGCTGCCGCCGGAGCTGGGCGCGCTGCCGAG GCTGCAGACGCTCGACCTCTCCAACAACCGCTTCTCCGGCCGCGTCCCCGACACGCTCGG CCGCCTCTCCACCCTCCGATACCTGAGGCTAAACAACAACAGCTTGTCCGGGGCGTTCCC GTCGTCGCTGGCCAAGATCCCACAGCTCTCCTTCCTGGACTTGTCCTACAACAACCTCAC TGGCCCTGTTCCTCACTTCCCCACAAGAACATTCAACGTCGTGGGCAATCCAATGATATG CGGGAGCAGCAGCGGCAGCCATGCGGGGAACGCGAACGCAGCGGAGTGCGCCACCGTGGT CGCCCCGGTCACCGTGCCATTCCCGCTGGACTCCACTCCGAGCAGCAGCAGCAGGGCGGC AGCGGCAGCGGTGGGGAGGTCAAAGGGTGGAGGAGGCGCCGCGCGGTTGCCGATCGGAGT AGGGACAAGCCTTGGCGCCTCCGCGCTTGTGCTCCTCGCCGTCTCCTGCTTTCTCTGGAG GCGCAGGCGCCGGCACCGCTGCCTCCTCTCGGGCCCCTCCTCCGTCCTCGGCATCCTCGA GAAGGGGAGAGACGTGGAGGATGGGGGAGGAGGGGAGGTGATGGCGAGGCTGGGGAACGT GAGGCAGTTCGGGCTGAGGGAGCTGCACGCGGCGACGGACGGGTTCAGCGCGAGGAACAT ACTGGGGAAAGGAGGGTTCGGGGACGTGTACCGGGGGAGGCTCTCCGACGGCACGGTCGT GGCGGTGAAGCGGCTCAAGGACCCGACCGCGTCCGGGGAGGCGCAGTTCCGGACGGAGGT GGAGATGATCAGCCTCGCCGTGCACCGCCACCTCCTCCGCCTCGTCGGCTTCTGCGCCGC GGCCTCCGGCGAGCGCCTCCTCGTCTACCCCTACATGCCCAACGGCAGCGTCGCCTCCCG CCTTCGAGGGAAGCCGCCGCTGGACTGGCAGACGAGGAAGCGGATCGCGGTGGGGACGGC GAGGGGATTGCTGTACCTGCACGAGCAGTGCGACCCAAAGATCATCCACCGCGACGTGAA GGCCGCGAACGTGCTGCTGGACGAGTGCCACGAGGCCGTCGTCGGCGACTTCGGGCTCGC CAAGCTGCTCGACCACGGCGACTCCCACGTCACCACGGCGGTGCGCGGCACGGTGGGGCA CATCGCGCCGGAGTACCTCTCCACGGGGCAGTCGTCGGAGAAGACCGACGTGTTCGGCTT CGGCATCCTGCTGCTCGAGCTCGTCACCGGCCAGCGCGCGCTCGAGGTCGGCAAGGGCTC CGGCGTCATCCAGCACCAGAAGGGCGTCATGCTCGATTGGGTGAGGAAGGTGCACCAAGA GAAGCTGCATGACTTGCTAGTGGACCAAGATTTGGGGCCTCACTACGACAGGATAGAGGT GGCGGAGATGGTGCAGGTGGCGCTGCTCTGCACCCAGTTCCAGCCGTCTCACCGGCCGAG GATGTCGGAGGTGGTCCGGATGCTGGAGGGAGACGGGCTCGCCGAGAAATGGGAGGCCAA CCACCGGCCGGCGGCGATGGCGGCGGCGGCGGCGCCCCATGAGCTCGGCTACGACCACCG CAACGACTCCAACGGCTCCGTCTTCTTCAACGACTTCCACGACAACGACAGCAGCCTTAG CAGCGACGAGGTGCGGTCCATCGACATGGTAGAGGAGATGGAGCTGTCAGGGCCAAGGTA GCAGCAGAATGCAGCAGAGCATTCAGAGCACTGAAAAAGAAATTCAGAGAATCAGATATT CAGGGAGAGTACTTCAGGAAAAAAAGAGAAGAAAAATATATTACAGAGGGAAGGGATTGG ATTTGTTGCTAGCTGGAGTAGTACGAGTAGTTTCAAAGTGATTGAGATGCTTTTTAGTTT TAGACCACAGTGTGTAGTTTCTGTCTGATCAAAGAGAGGCCCTTTCCCCGAGAAAGATGT AAAGAAAAAGGGGCTCCTCCTCTCCGGTTTCTCTTTTGCTTCTTTTCACAGGCTTCTTTA TCTTTTGCTGCTGCTGCTTTCTTTTCTCTCTTTCTTTTGTTGATTTGGGGACGGACATGG CACATGCAGCGCTGCAGAAGACCTTTGGTTTGCATTCTGGCCCTGATCTCGAGCAAACTT TTGCAGTACACCCCTGTTCATATATGTATGGGCTTCTTCTGAATTCTGAACTCCTTATCT GTATCACTGTATGTAAGGGGAGGGATGTTG