Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0442200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:21549758:21550731:-1 gene:Os08g0442200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os08t0442200-01);Similar to strictosidine synthase 1. (Os08t0442200-02)
Sequence	TCATCTGAGGAGACGGAGAGCACATGCGGGCGTCCGCTGGGTCTTGCGTTCCACCTCAAG ACGGGGATCCTCTACTTCGCCGACGCCTACAAGGGCCTGATGCGGGTTGGGCCGCGGGGT GGCCAGGCCGACGTGCTCGCCACGGAGGCCGACGGCGTGCCGTTCAATTACCTCAACGGC GTCGACGTCGACCAGGACACCGGTGACGTCTACTTCACCGACAGCAGCACCACCATCACA CGCCGATACCAAGAGAACATCATGAGGAACCGCGACGCGACGGCTCGGCTGATGAAGTAC GACGCGAAGACGAAGCAGGTGACGGTGCTGAAGGACCGGTTGCCGTACGCCAACGGCGTG GCCGTCAGCCACGACGGGAGGTACCTCGTGGTGGCGCACACGGGGCCGGCACAGGTGTTC AGGTATTGGCTCAAGGGGGCCAAGGCCGGCCAGTACGAGCTCTTCGCCGACCTGCCCGGG TACCCCGACAACGTCCGGCGAGACGCCAAGGGGGGCTACTGGGTGGGGCTCAACCGGGAG AAGATTACGTTCAACGTGCCGGCGGCGGCTTCTCCGGCCAAGCACCTGGTCGGCGTCCGG CTCAACGGCGACGGCGTCGAGGTGGAGGAGCTGACGGCTGCTAGTAGGGCTGTGACGCTG AGCGAGGTTGTGGAGAGGGACCGCAAGTTGTGGCTCGGCTCCGTCGATCTCGACTACGTC GGCCTACTGCAGTAG

Peptide Sequence

PEP ID	Os08t0442200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:21549758:21550731:-1 gene:Os08g0442200 transcript:Os08t0442200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os08t0442200-01);Similar to strictosidine synthase 1. (Os08t0442200-02)
Sequence	SSEETESTCGRPLGLAFHLKTGILYFADAYKGLMRVGPRGGQADVLATEADGVPFNYLNG VDVDQDTGDVYFTDSSTTITRRYQENIMRNRDATARLMKYDAKTKQVTVLKDRLPYANGV AVSHDGRYLVVAHTGPAQVFRYWLKGAKAGQYELFADLPGYPDNVRRDAKGGYWVGLNRE KITFNVPAAASPAKHLVGVRLNGDGVEVEELTAASRAVTLSEVVERDRKLWLGSVDLDYV GLLQ

Transcript Sequence

Transcript ID	Os08t0442200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21549758:21550731:-1 gene:Os08g0442200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os08t0442200-01);Similar to strictosidine synthase 1. (Os08t0442200-02)
Sequence	CGTCATCTGAGGAGACGGAGAGCACATGCGGGCGTCCGCTGGGTCTTGCGTTCCACCTCA AGACGGGGATCCTCTACTTCGCCGACGCCTACAAGGGCCTGATGCGGGTTGGGCCGCGGG GTGGCCAGGCCGACGTGCTCGCCACGGAGGCCGACGGCGTGCCGTTCAATTACCTCAACG GCGTCGACGTCGACCAGGACACCGGTGACGTCTACTTCACCGACAGCAGCACCACCATCA CACGCCGATACCAAGAGAACATCATGAGGAACCGCGACGCGACGGCTCGGCTGATGAAGT ACGACGCGAAGACGAAGCAGGTGACGGTGCTGAAGGACCGGTTGCCGTACGCCAACGGCG TGGCCGTCAGCCACGACGGGAGGTACCTCGTGGTGGCGCACACGGGGCCGGCACAGGTGT TCAGGTATTGGCTCAAGGGGGCCAAGGCCGGCCAGTACGAGCTCTTCGCCGACCTGCCCG GGTACCCCGACAACGTCCGGCGAGACGCCAAGGGGGGCTACTGGGTGGGGCTCAACCGGG AGAAGATTACGTTCAACGTGCCGGCGGCGGCTTCTCCGGCCAAGCACCTGGTCGGCGTCC GGCTCAACGGCGACGGCGTCGAGGTGGAGGAGCTGACGGCTGCTAGTAGGGCTGTGACGC TGAGCGAGGTTGTGGAGAGGGACCGCAAGTTGTGGCTCGGCTCCGTCGATCTCGACTACG TCGGCCTACTGCAGTAGAAAGAAGTTATCTGTTTAGTGGTGTTAGGAATAATAAAGGCAG GCTAATTAGGTATTTAGCAGTAGAATCAGGATTGGTACAACTCTTTTTTGCTGGCAGCTA TATTAATTAGACGTTTTAGT