Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0440800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:21445787:21450773:1 gene:Os08g0440800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glyceraldehyde-3-phosphate dehydrogenase. (Os08t0440800-01)
Sequence	ATGGCGGCGGTGGCGGGGACGGGGGTGTTCGCGGAGATCCTGGAGGGGGAGGTGTACAGG TACTACGCCGACGGGGAGTGGCGCGTCTCGGCCTCCGGCAAGTCCGTCGCCATCGTCAAC CCCACCACCCGCCTCACCCAGTACAGGGTGCAAGCATGCACCCAGGAGGAGGTGAACAAG GTGATGGAGACGGCGAAGGTGGCGCAGAAGGCGTGGGCGCGCACGCCGCTGTGGAAGCGC GCGGAGCTCCTGCACAAGGCGGCCGCCATCCTCAAGGAGCACAAGACCCCGATTGCAGAG TGCCTCGTCAAGGAGATCGCCAAGCCTGCCAAGGACGCGATCTCTGAAGTGGTGAGGTCA GGGGATTTGGTGTCGTACACAGCTGAGGAGGGTGTTCGGATACTGGGGGAAGGCAAGCTG CTGGTGTCTGATAGCTTCCCGGGCAATGAACGGAACAAGTACTGTTTGAGCTCCAAGGTA CCTCTTGGAGTAGTTTTGGCAATCCCACCATTTAACTATCCTGTCAACCTAGCAGTCTCC AAGATTGGCCCAGCACTAATTGCTGGCAATGCTCTTGTTCTGAAGCCTCCAACTCAGGGA GCGGTGGCTGCACTACATATGGTGCACTGCTTCCACCTTGCTGGTTTCCCCAAAGGCTTG ATCAATTGTGTCACCGGGAAAGGTTCTGAAATTGGTGATTTTCTTACGATGCATCCTGGA GTCAACTGCATAAGTTTTACGGGAGGTGATACTGGTATAGCCATTTCAAAGAAGGCTGGA ATGGTCCCGCTTCAGATGGAACTTGGAGGAAAAGATGCTTGTGTTGTGTTAGAGGATGCA GATCTGGATTTAGTGGCAGCAAATATAGTAAAAGGAGGCTTCTCTTACAGTGGCCAGAGG TGCACTGCTGTGAAAGTGGTGCTGATCATGGAATCCGTTGCTGATATCGTGGTAGAGAAG GTGAAGGCCAAGTTGGCAAAACTGACAGTTGGGCCACCTGAGGCTGACTCTGATATCACC CCAGTTGTAACAGAATCCTCAGCAAATTTTATTGAGGGTTTGGTCATGGATGCCAAGGAG AAAGGAGCAACCTTTTGTCAGGAGTACAGGAGAGAAGGCAACCTTATCTGGCCGTTGCTA CTGGATCACGTCCGGCCTGACATGAGGATTGCTTGGGAGGAGCCATTTGGCCCTGTCTTG CCTGTGATTAGGATCAACTCGGTCGAGGAAGGCATCCACCATTGCAATGCCAGCAATTTT GGGCTGCAGGGATGTGTATTCACTAAAGATATCAACAAAGCGATCATGATCAGCGATGCG ATGGAGACCGGAACCGTTCAGATCAACTCTGCACCGGCTCGAGGACCTGACCATTTCCCC TTCCAGGGCTTGAAGGACAGTGGGATTGGATCCCAGGGGATAACTAACAGCATAAACATG ATGACCAAGGTGAAGAGCACTGTCATAAACCTACCATCTCCATCCTACACCATGGGCTGA

Peptide Sequence

PEP ID	Os08t0440800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:21445787:21450773:1 gene:Os08g0440800 transcript:Os08t0440800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glyceraldehyde-3-phosphate dehydrogenase. (Os08t0440800-01)
Sequence	MAAVAGTGVFAEILEGEVYRYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNK VMETAKVAQKAWARTPLWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRS GDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVS KIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLINCVTGKGSEIGDFLTMHPG VNCISFTGGDTGIAISKKAGMVPLQMELGGKDACVVLEDADLDLVAANIVKGGFSYSGQR CTAVKVVLIMESVADIVVEKVKAKLAKLTVGPPEADSDITPVVTESSANFIEGLVMDAKE KGATFCQEYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF GLQGCVFTKDINKAIMISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINM MTKVKSTVINLPSPSYTMG

Transcript Sequence

Transcript ID	Os08t0440800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21445787:21450773:1 gene:Os08g0440800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glyceraldehyde-3-phosphate dehydrogenase. (Os08t0440800-01)
Sequence	GAGAAAAAAAAAGTAAATAAAACGAACAGGACGCGAAGACGAAAACCCCCCTCGCCTCTC GTCTCTTTTCGTGCTCCTCCGAATCCGGTGGGTCCCACCTCCCTCACCACGCGTCCCCGG CCGATCACTTCGCCTCCTCCTCCTCCGCTCTATTAAACCCTCCTTCGGCCACCGCGCCTC CTCCCCTCTCCACCACTCGCGCCCCCATCACCACCCACTCCACTCCCTCCTCCCCCGAGC CCGAGTGCCTCACCGCCACTAGCTAGCAGCAGCGGCGGCGGCGGCGGAGAAGAGGAGGAG ATATGGCGGCGGTGGCGGGGACGGGGGTGTTCGCGGAGATCCTGGAGGGGGAGGTGTACA GGTACTACGCCGACGGGGAGTGGCGCGTCTCGGCCTCCGGCAAGTCCGTCGCCATCGTCA ACCCCACCACCCGCCTCACCCAGTACAGGGTGCAAGCATGCACCCAGGAGGAGGTGAACA AGGTGATGGAGACGGCGAAGGTGGCGCAGAAGGCGTGGGCGCGCACGCCGCTGTGGAAGC GCGCGGAGCTCCTGCACAAGGCGGCCGCCATCCTCAAGGAGCACAAGACCCCGATTGCAG AGTGCCTCGTCAAGGAGATCGCCAAGCCTGCCAAGGACGCGATCTCTGAAGTGGTGAGGT CAGGGGATTTGGTGTCGTACACAGCTGAGGAGGGTGTTCGGATACTGGGGGAAGGCAAGC TGCTGGTGTCTGATAGCTTCCCGGGCAATGAACGGAACAAGTACTGTTTGAGCTCCAAGG TACCTCTTGGAGTAGTTTTGGCAATCCCACCATTTAACTATCCTGTCAACCTAGCAGTCT CCAAGATTGGCCCAGCACTAATTGCTGGCAATGCTCTTGTTCTGAAGCCTCCAACTCAGG GAGCGGTGGCTGCACTACATATGGTGCACTGCTTCCACCTTGCTGGTTTCCCCAAAGGCT TGATCAATTGTGTCACCGGGAAAGGTTCTGAAATTGGTGATTTTCTTACGATGCATCCTG GAGTCAACTGCATAAGTTTTACGGGAGGTGATACTGGTATAGCCATTTCAAAGAAGGCTG GAATGGTCCCGCTTCAGATGGAACTTGGAGGAAAAGATGCTTGTGTTGTGTTAGAGGATG CAGATCTGGATTTAGTGGCAGCAAATATAGTAAAAGGAGGCTTCTCTTACAGTGGCCAGA GGTGCACTGCTGTGAAAGTGGTGCTGATCATGGAATCCGTTGCTGATATCGTGGTAGAGA AGGTGAAGGCCAAGTTGGCAAAACTGACAGTTGGGCCACCTGAGGCTGACTCTGATATCA CCCCAGTTGTAACAGAATCCTCAGCAAATTTTATTGAGGGTTTGGTCATGGATGCCAAGG AGAAAGGAGCAACCTTTTGTCAGGAGTACAGGAGAGAAGGCAACCTTATCTGGCCGTTGC TACTGGATCACGTCCGGCCTGACATGAGGATTGCTTGGGAGGAGCCATTTGGCCCTGTCT TGCCTGTGATTAGGATCAACTCGGTCGAGGAAGGCATCCACCATTGCAATGCCAGCAATT TTGGGCTGCAGGGATGTGTATTCACTAAAGATATCAACAAAGCGATCATGATCAGCGATG CGATGGAGACCGGAACCGTTCAGATCAACTCTGCACCGGCTCGAGGACCTGACCATTTCC CCTTCCAGGGCTTGAAGGACAGTGGGATTGGATCCCAGGGGATAACTAACAGCATAAACA TGATGACCAAGGTGAAGAGCACTGTCATAAACCTACCATCTCCATCCTACACCATGGGCT GAGGTGTTCCATATAGATGATCAGATTTCTATAACCACATGAGTACAATGTAGAGAATTC AAATGTTTTGTAACCACGTGAGCTTTGTACGCTATTTGCACCACAGTTCTCCCTGTATGT TGTTGGCTCTTTTACAATTAAGAATAATGCATGTTGAAGTATG