Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0440300-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:21418859:21420117:1 gene:Os08g0440300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1A, carbon cataboliterepressor 4-associated factor 1A, CCR4-associated factor 1-12 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Development and stress response (Os08t0440300-01);Ribonuclease CAF1 family protein. (Os08t0440300-03);Ribonuclease CAF1 family protein. (Os08t0440300-04)
Sequence	ATGGCCGCCGCCGCCGCAGCCTGCGTAGAGAGCCCCGACGAGGGCGTGGAGATCCGGGAG GTATGGGCGGGGAACCTGGAGGCGGAGATCGCGGCGATCCGCGACGAGGTCGACCGGTAC CCGTACGTCGCCATGGACACGGAGTTCCCGGGCATCGTGTGCCGCCCCGTCGGCAACTTC CGCACCACCGACGAGTTCAACTACGCCAACCTCGAGGCCAACGTCAACATGCTCAAGCTC ATCCAGCTCGGCCTCACCCTCTCCGACGAGGGCGGCGACCTCCCGCGGCGGGGGACGGGG GGCAGGCGCTGCATCTGGCAGTTCAACTTCCGCGGGTTCGACCCCCGGACCGACCCGTCC AACGCCGACTCCATCCAGATGCTCCGCACCTGCGGCATCGACTTCGATCGGTTCGCCGCT GAGGGGGCCGACCCGATCCGCTTCGCCGAGCTGCTCATGTCGTCGGGCGTCGTGCTCAAC GCCGACGTGCAGTGGATCACCTTCCACAGCGGGTACGACTTCGGTTACCTGCTCAGGCTG CTCACCGGCCGGAACCTGCCGGACAACATGCCCGCCTTCTTTGACCTCATCAGAATCTAC TTCCCGGTGCTCTACGACATCAAGCACCTCATGAGGTTCTGCAGCAACCTCCACGGCGGC CTGAGCAGGCTCGGTGAGCTTCTTGATGTCAAGCGTGTGGGGACCTGCCACCAGGCCGGC TCTGACTCGCTGTTGACCCTCGGGTGCTACAACAAGATCAAGGAGGTGTACTTCAAAGGA TCGACCGAGAAGCATGCCGGTGTGTTGTATGGGCTTGTTATTGAGGATGGGGTGAACAGA CCACCACCAACTCAGCCCAATGAATGA

Peptide Sequence

PEP ID	Os08t0440300-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:21418859:21420117:1 gene:Os08g0440300 transcript:Os08t0440300-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1A, carbon cataboliterepressor 4-associated factor 1A, CCR4-associated factor 1-12 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Development and stress response (Os08t0440300-01);Ribonuclease CAF1 family protein. (Os08t0440300-03);Ribonuclease CAF1 family protein. (Os08t0440300-04)
Sequence	MAAAAAACVESPDEGVEIREVWAGNLEAEIAAIRDEVDRYPYVAMDTEFPGIVCRPVGNF RTTDEFNYANLEANVNMLKLIQLGLTLSDEGGDLPRRGTGGRRCIWQFNFRGFDPRTDPS NADSIQMLRTCGIDFDRFAAEGADPIRFAELLMSSGVVLNADVQWITFHSGYDFGYLLRL LTGRNLPDNMPAFFDLIRIYFPVLYDIKHLMRFCSNLHGGLSRLGELLDVKRVGTCHQAG SDSLLTLGCYNKIKEVYFKGSTEKHAGVLYGLVIEDGVNRPPPTQPNE

Transcript Sequence

Transcript ID	Os08t0440300-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21418859:21420117:1 gene:Os08g0440300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1A, carbon cataboliterepressor 4-associated factor 1A, CCR4-associated factor 1-12 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Development and stress response (Os08t0440300-01);Ribonuclease CAF1 family protein. (Os08t0440300-03);Ribonuclease CAF1 family protein. (Os08t0440300-04)
Sequence	CTCCTCCGCCTCCGCCTCCGCCTCCGCCTCCCTCGCAAGGGGTCTCCCACGCATCGCCGC CCGCCGCTGACGCGTGGGACCCACCCCTTCCCCCCCCCCCCACACCACCCGCCGCTTCCC ATCTCCGACAAGCGCCTACAACGCCGCAAGTAGCCCTAACCCTAGGTCGCTGGATGCGCC GATGGCCGCCGCCGCCGCAGCCTGCGTAGAGAGCCCCGACGAGGGCGTGGAGATCCGGGA GGTATGGGCGGGGAACCTGGAGGCGGAGATCGCGGCGATCCGCGACGAGGTCGACCGGTA CCCGTACGTCGCCATGGACACGGAGTTCCCGGGCATCGTGTGCCGCCCCGTCGGCAACTT CCGCACCACCGACGAGTTCAACTACGCCAACCTCGAGGCCAACGTCAACATGCTCAAGCT CATCCAGCTCGGCCTCACCCTCTCCGACGAGGGCGGCGACCTCCCGCGGCGGGGGACGGG GGGCAGGCGCTGCATCTGGCAGTTCAACTTCCGCGGGTTCGACCCCCGGACCGACCCGTC CAACGCCGACTCCATCCAGATGCTCCGCACCTGCGGCATCGACTTCGATCGGTTCGCCGC TGAGGGGGCCGACCCGATCCGCTTCGCCGAGCTGCTCATGTCGTCGGGCGTCGTGCTCAA CGCCGACGTGCAGTGGATCACCTTCCACAGCGGGTACGACTTCGGTTACCTGCTCAGGCT GCTCACCGGCCGGAACCTGCCGGACAACATGCCCGCCTTCTTTGACCTCATCAGAATCTA CTTCCCGGTGCTCTACGACATCAAGCACCTCATGAGGTTCTGCAGCAACCTCCACGGCGG CCTGAGCAGGCTCGGTGAGCTTCTTGATGTCAAGCGTGTGGGGACCTGCCACCAGGCCGG CTCTGACTCGCTGTTGACCCTCGGGTGCTACAACAAGATCAAGGAGGTGTACTTCAAAGG ATCGACCGAGAAGCATGCCGGTGTGTTGTATGGGCTTGTTATTGAGGATGGGGTGAACAG ACCACCACCAACTCAGCCCAATGAATGAATATGGTTAGTTAAATAAAACAATCTGAAATG GGAAAAAAAATTGAAACTTTCGTTGGTGAATATATGTTGTCTGATCTGATCTGATGATTT GCTTATGGTTTCCATGGTAGTTTGTTGTGCCTTGCTGTTACTATTTGTTGTAGTTGAGTT GCTTTAGTTGTTTTGTCTTTGACTCTTTGTGCTGTGCAATCATCTTTCATTGTTTGCCC