Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0440000-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:21400087:21403379:-1 gene:Os08g0440000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle transport v-SNARE family protein. (Os08t0440000-01);Vesicle transport v-SNARE family protein. (Os08t0440000-02)
Sequence	ATGGAGGCGTCTTCCTGGGACGCCCTCCGCAAGCAGGCAAGGAGGCTAGAAGCTCAGTTA GATGACCAAATGAGTGCTTACCGTAAATTGATTTCCATGAAATCTGATGGTTCTGAGAAT GATATCGAGTCCGATATAGAAAGATCGCTGAAGCAACTTCAGCAAGTAAATTCTCAAATG CAGACATGGGTATCATCAGGAGGCTCAGAAGTCCTTTCTCATACATTGACTCGTCATATG GAGATATTGCAAGACCTTACACAGGAATTCTATCGCCTCCGATCAAGCCTTAGAGCAAAG CAACAACATGCTTCTCTTCTTGACTTGAGAGATTTTGACAGAGCGAAGTTTGATGTTGAA GAGGGTGCTGACTCTGATCAAGCTCTGCTCAAAGAACAAGCTGCGATCAGCAGGAGTACT GGGCAGATGGATACCGTGATATCACAAGCTCAAGCTACATTAGGCACACTTATGTTGCAA CGATCAACATTTGGTGGTATTACTACGAAGATAAGCAACGTTAGCAGTCGGCTCCCTACG ATTAATCAAATTCTTTCATCCATCAAAAGAAAGAAATCGATGGACACCATTATTCTATCC CTGGTTGCATCTGTTTGTGCATTTCTTATTTTTATCTATTGGATGTCAAAGTAA

Peptide Sequence

PEP ID	Os08t0440000-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:21400087:21403379:-1 gene:Os08g0440000 transcript:Os08t0440000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle transport v-SNARE family protein. (Os08t0440000-01);Vesicle transport v-SNARE family protein. (Os08t0440000-02)
Sequence	MEASSWDALRKQARRLEAQLDDQMSAYRKLISMKSDGSENDIESDIERSLKQLQQVNSQM QTWVSSGGSEVLSHTLTRHMEILQDLTQEFYRLRSSLRAKQQHASLLDLRDFDRAKFDVE EGADSDQALLKEQAAISRSTGQMDTVISQAQATLGTLMLQRSTFGGITTKISNVSSRLPT INQILSSIKRKKSMDTIILSLVASVCAFLIFIYWMSK

Transcript Sequence

Transcript ID	Os08t0440000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21400087:21403379:-1 gene:Os08g0440000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle transport v-SNARE family protein. (Os08t0440000-01);Vesicle transport v-SNARE family protein. (Os08t0440000-02)
Sequence	AACTAACCACCCCTCCCGTTTCGTCCTCCCCTCTGCGTTGCGTCCTACTTACTCTCTCCG ATTCTCTCCCCTCCTTCCCCGATAGGGGAGAGATCCAGCAGCGGCAGCAGCCAAGCCCAA GCTCTCCCACCGAGATCCCCCGCGCGCCGCGCCCCGTCGGCCGCCGCCGCCATGGAGGCG TCTTCCTGGGACGCCCTCCGCAAGCAGGCAAGGAGGCTAGAAGCTCAGTTAGATGACCAA ATGAGTGCTTACCGTAAATTGATTTCCATGAAATCTGATGGTTCTGAGAATGATATCGAG TCCGATATAGAAAGATCGCTGAAGCAACTTCAGCAAGTAAATTCTCAAATGCAGACATGG GTATCATCAGGAGGCTCAGAAGTCCTTTCTCATACATTGACTCGTCATATGGAGATATTG CAAGACCTTACACAGGAATTCTATCGCCTCCGATCAAGCCTTAGAGCAAAGCAACAACAT GCTTCTCTTCTTGACTTGAGAGATTTTGACAGAGCGAAGTTTGATGTTGAAGAGGGTGCT GACTCTGATCAAGCTCTGCTCAAAGAACAAGCTGCGATCAGCAGGAGTACTGGGCAGATG GATACCGTGATATCACAAGCTCAAGCTACATTAGGCACACTTATGTTGCAACGATCAACA TTTGGTGGTATTACTACGAAGATAAGCAACGTTAGCAGTCGGCTCCCTACGATTAATCAA ATTCTTTCATCCATCAAAAGAAAGAAATCGATGGACACCATTATTCTATCCCTGGTTGCA TCTGTTTGTGCATTTCTTATTTTTATCTATTGGATGTCAAAGTAATCTTGCCAAATAAAG GCGTTATAGTGTTGTATGTTTGGAAAAGTAGTAGTATACATGCTTGCCGTGTTTGTACAA TATCGCCCCATGTTATATCTTACCTGCTGTTCTAGCTACATTAACTATCATTCTGATTGA GCTACTTCAACCCCATCTGTACATGTGAGCCGTGACGAAGAAAAATAAGTTTCTGGTATT G