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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0438100-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:21280711:21281328:1 gene:Os08g0438100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ZF-HD homeobox protein. (Os08t0438100-01)
Sequence

AGGGTGAGGTACGGCGAGTGCAGGCGGAACCACGCGGCGAGGATGGGCGGCCACGCGGTG
GACGGGTGCCGCGAGTTCCTCGCCGAGGGGGAGGAGGGCACCGGCGGCGCGCTCCGGTGC
GCCGCGTGCGGATGCCACCGCAGCTTCCACCGCCGGGTGGTGGTGGTGCAGCAATGCTGC
GCCTGCGACACCGCGGCGGCGGCGGCGGCAGCCGGGGGATGGGAGTGGCGGGACTGCTCG
CCGGAGTCGTCCTCCTCGGCGTCCAGCACCACGGCCAGCTAG

Peptide Sequence

PEP ID

Os08t0438100-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:21280711:21281328:1 gene:Os08g0438100 transcript:Os08t0438100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ZF-HD homeobox protein. (Os08t0438100-01)
Sequence

RVRYGECRRNHAARMGGHAVDGCREFLAEGEEGTGGALRCAACGCHRSFHRRVVVVQQCC
ACDTAAAAAAAGGWEWRDCSPESSSSASSTTAS

Transcript Sequence

Transcript ID

Os08t0438100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:21280711:21281328:1 gene:Os08g0438100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ZF-HD homeobox protein. (Os08t0438100-01)
Sequence

GAGGGTGAGGTACGGCGAGTGCAGGCGGAACCACGCGGCGAGGATGGGCGGCCACGCGGT
GGACGGGTGCCGCGAGTTCCTCGCCGAGGGGGAGGAGGGCACCGGCGGCGCGCTCCGGTG
CGCCGCGTGCGGATGCCACCGCAGCTTCCACCGCCGGGTGGTGGTGGTGCAGCAATGCTG
CGCCTGCGACACCGCGGCGGCGGCGGCGGCAGCCGGGGGATGGGAGTGGCGGGACTGCTC
GCCGGAGTCGTCCTCCTCGGCGTCCAGCACCACGGCCAGCTAGCAAGAAAGAGATCAATT
CGTGCGGCGCGGCGGCGGCGGCGGCGGCGACCAGCATGTCACGCTTCGTCCATGGCGAGA
TCTCTCGATCATCACCAGGTGTTCGACTGCATCATATTCATATCCATCCATGAAACTTGT
TGTCTCCTCGATCGTCGATCTCCTTTTGCACGCTGAATTTGTTACTGCCGCCTCTTGTGT
TCTTCTCTGACTGGGCTAGCTAGTGAGTGATGAGCGTATGATTACATCCTTACTTATTAT
TATTGTTTCTCATAATTTAGTCTACTGCTACTGGTTATATTGATTTAATTGTACGTAACT
ACTCCCTATTATCAAGTC