Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0436000-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:21173501:21176249:-1 gene:Os08g0436000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0436000-01);Hypothetical conserved gene. (Os08t0436000-02)
Sequence

GCATTTGGGTTTGTCCACAAGATAGCAACCTTTGAGAAGGCTGCTGGTTTCCAGGCACTT
ATCCAATATACTGATGCTCCAACTGCACTAGAAGCAAAAAATTCGTTGGATGGAAGAAGC
ATCCCGAGATATTTACTTCCTGAACATGTCCCCACCTGTCACCTGCGCATAACCTTTTCT
GCGCACAAGGATTTGAATATCAAGTTTCAATCACATCGTAGCAGGGATTACACGAATCCA
TATCTTCCTGTGAATCCAACAGCAATCGAGGGAATCGCACAGCCCACTTTAGGCCCTGAT
GGGAAGATAAAGGAGCCTGAGAGCAATGTGCTTTTGGCTTCAATAGAGAACATGCAGTAT
GCTGTGACGGTGGATGTTCTACATACTGTGTTCTCTGCTTTTGGTACTGTTCAAAAGATT
GCAATGTTTGAGAAGAATGGTGGAATGCAGGCCTTAATTCAATATCCAGACATCACAACG
GCAGCAGTTGCTAAACAAGCTTTGGAAGGGCACTGCATATATGATGGAGGTTACTGTAAG
CTTCATCTGTCATACTCTCGTCATACTGATCTCAATGTAAAGGCACATGATGAGAGAAGC
AGAGACTACACTGTTTCATCAGATCCTAGTGCACAAATGCAAGCTGCAGCGCAAGCCCCA
GGTCCTAGCACTCCAGGAGTGGCATGGCAAAACACCGCACCCAGTGCTTCCTTTTATGGC
AGCACTGCGGCAGCGACTCCTGTTGGACAAGTGCCAGCTTGGAATCCAAACATGCAGGCA
GGTGCTTTTGGATCGGCATCGTCTGCATACCCAACCCAACCAATGATGCCAGGATCAGTT
CCACACTATCCAGGAATTGGATCCAGTTCCGGAGCACTGCCAGTATCGTTCCAGGCCTCA
CATCAGATGCCACAGTATGGTGTACCCCCAGCTGCTCCACACCATGCTCCACCGGCTGGC
CAACCAATGTATTTCCCGAAATAA

Peptide Sequence

PEP ID

Os08t0436000-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:21173501:21176249:-1 gene:Os08g0436000 transcript:Os08t0436000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0436000-01);Hypothetical conserved gene. (Os08t0436000-02)
Sequence

AFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVPTCHLRITFS
AHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLLASIENMQY
AVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGGYCK
LHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAWQNTAPSASFYG
STAAATPVGQVPAWNPNMQAGAFGSASSAYPTQPMMPGSVPHYPGIGSSSGALPVSFQAS
HQMPQYGVPPAAPHHAPPAGQPMYFPK

Transcript Sequence

Transcript ID

Os08t0436000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:21173501:21176249:-1 gene:Os08g0436000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0436000-01);Hypothetical conserved gene. (Os08t0436000-02)
Sequence

CGCATTTGGGTTTGTCCACAAGATAGCAACCTTTGAGAAGGCTGCTGGTTTCCAGGCACT
TATCCAATATACTGATGCTCCAACTGCACTAGAAGCAAAAAATTCGTTGGATGGAAGAAG
CATCCCGAGATATTTACTTCCTGAACATGTCCCCACCTGTCACCTGCGCATAACCTTTTC
TGCGCACAAGGATTTGAATATCAAGTTTCAATCACATCGTAGCAGGGATTACACGAATCC
ATATCTTCCTGTGAATCCAACAGCAATCGAGGGAATCGCACAGCCCACTTTAGGCCCTGA
TGGGAAGATAAAGGAGCCTGAGAGCAATGTGCTTTTGGCTTCAATAGAGAACATGCAGTA
TGCTGTGACGGTGGATGTTCTACATACTGTGTTCTCTGCTTTTGGTACTGTTCAAAAGAT
TGCAATGTTTGAGAAGAATGGTGGAATGCAGGCCTTAATTCAATATCCAGACATCACAAC
GGCAGCAGTTGCTAAACAAGCTTTGGAAGGGCACTGCATATATGATGGAGGTTACTGTAA
GCTTCATCTGTCATACTCTCGTCATACTGATCTCAATGTAAAGGCACATGATGAGAGAAG
CAGAGACTACACTGTTTCATCAGATCCTAGTGCACAAATGCAAGCTGCAGCGCAAGCCCC
AGGTCCTAGCACTCCAGGAGTGGCATGGCAAAACACCGCACCCAGTGCTTCCTTTTATGG
CAGCACTGCGGCAGCGACTCCTGTTGGACAAGTGCCAGCTTGGAATCCAAACATGCAGGC
AGGTGCTTTTGGATCGGCATCGTCTGCATACCCAACCCAACCAATGATGCCAGGATCAGT
TCCACACTATCCAGGAATTGGATCCAGTTCCGGAGCACTGCCAGTATCGTTCCAGGCCTC
ACATCAGATGCCACAGTATGGTGTACCCCCAGCTGCTCCACACCATGCTCCACCGGCTGG
CCAACCAATGTATTTCCCGAAATAATCTATCTTTATCCGATGTACAAGCAATTAGAGCAA
TTGCAAATGTTGCCTGCAATACTCGGGTCTGGGTATCTTCTCTTCAAATTTTGGGTTGTA
ACTCGTCTATGCAGCTATTCATATTGTAACTCAGTGAGCTCCCTGTCGCAAATGTGCCTC
TGCGTCAGTCGCTGTCTGTAAACTGTCCGGCAATTAGAAATTCCCATCCTTAGCATGCCT
GGTATTGTTCAGCTCG