Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0435900-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:21171332:21172643:-1 gene:Os08g0435900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8 description:Similar to LHC I type IV chlorophyll binding protein (Fragment). (Os08t0435900-01);Similar to LHC I type IV chlorophyll binding protein (Fragment). (Os08t0435900-03);Non-protein coding transcript. (Os08t0435900-04)
Sequence	ATGGCGTCCGTCACCGCCCGCACCCCGGTCGCAGCCCTCCGCTCGTCGGCGTCGCTCAAG TCTACCTTCCTAGGGCAATCCTCCACCCGCCTCGCCCGCGCACCGACTACGAGGCGTAAT GTTCGGGCGGAGGCCAAGGGAGAGTGGCTCCCCGGCCTCCCTTCTCCCACCTACCTCAAC GGCAGCTTGCCAGGCGATAACGGGTTCGACCCGTTGGGTCTGGCGGAGGACCCGGAGAAC CTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCC GGGATGCTGCTGCCTGAGGTGCTGACGAAGATCGGGTTGATCGACGCGCCGCAGTGGTAC GACGCCGGCAAGGCCACCTACTTCGCGTCGTCGTCGACGCTGTTCGTCATCGAGTTCATC CTGTTCCACTACGTGGAGATCCGGCGGTGGCAGGACATCAAGAACCCTGGCTGCGTCAAC CAGGACCCCATCTTCAAGAGCTACAGCCTCCCGCCGCACGAGTGCGGCTACCCCGGCAGC GTCTTCAACCCCCTCAACTTCGAGCCCACCCTCGAGGCCAAGGAGAAGGAGCTCGCCAAC GGGAGGCTGGCGATGCTGGCGTTCTTGGGGTTCCTGGTGCAGCACAACGTGACGCAGAAG GGGCCCTTCGACAACCTGCTGCAGCACCTGTCTGACCCGTGGCACAACACCATCATCCAG ACGCTGTCAGGCTGA

Peptide Sequence

PEP ID	Os08t0435900-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:21171332:21172643:-1 gene:Os08g0435900 transcript:Os08t0435900-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8 description:Similar to LHC I type IV chlorophyll binding protein (Fragment). (Os08t0435900-01);Similar to LHC I type IV chlorophyll binding protein (Fragment). (Os08t0435900-03);Non-protein coding transcript. (Os08t0435900-04)
Sequence	MASVTARTPVAALRSSASLKSTFLGQSSTRLARAPTTRRNVRAEAKGEWLPGLPSPTYLN GSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIGLIDAPQWY DAGKATYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKSYSLPPHECGYPGS VFNPLNFEPTLEAKEKELANGRLAMLAFLGFLVQHNVTQKGPFDNLLQHLSDPWHNTIIQ TLSG

Transcript Sequence

Transcript ID	Os08t0435900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:21171332:21172643:-1 gene:Os08g0435900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8 description:Similar to LHC I type IV chlorophyll binding protein (Fragment). (Os08t0435900-01);Similar to LHC I type IV chlorophyll binding protein (Fragment). (Os08t0435900-03);Non-protein coding transcript. (Os08t0435900-04)
Sequence	ACCCTTGTGACTACACCCGCTTCGCTTCCTCCCCTCTCTAAGCCGGGGAAGCTAAGCCAT GGCGTCCGTCACCGCCCGCACCCCGGTCGCAGCCCTCCGCTCGTCGGCGTCGCTCAAGTC TACCTTCCTAGGGCAATCCTCCACCCGCCTCGCCCGCGCACCGACTACGAGGCGTAATGT TCGGGCGGAGGCCAAGGGAGAGTGGCTCCCCGGCCTCCCTTCTCCCACCTACCTCAACGG CAGCTTGCCAGGCGATAACGGGTTCGACCCGTTGGGTCTGGCGGAGGACCCGGAGAACCT GCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGG GATGCTGCTGCCTGAGGTGCTGACGAAGATCGGGTTGATCGACGCGCCGCAGTGGTACGA CGCCGGCAAGGCCACCTACTTCGCGTCGTCGTCGACGCTGTTCGTCATCGAGTTCATCCT GTTCCACTACGTGGAGATCCGGCGGTGGCAGGACATCAAGAACCCTGGCTGCGTCAACCA GGACCCCATCTTCAAGAGCTACAGCCTCCCGCCGCACGAGTGCGGCTACCCCGGCAGCGT CTTCAACCCCCTCAACTTCGAGCCCACCCTCGAGGCCAAGGAGAAGGAGCTCGCCAACGG GAGGCTGGCGATGCTGGCGTTCTTGGGGTTCCTGGTGCAGCACAACGTGACGCAGAAGGG GCCCTTCGACAACCTGCTGCAGCACCTGTCTGACCCGTGGCACAACACCATCATCCAGAC GCTGTCAGGCTGAGCGTGTGATCGATTTCATCAGGGCCAGGGCATCTCAAGGAGCTTGAT GAGTTCAGGCTGGTGAAACCGATGATTGGGCGATGGAAGATGTTCTCTTCTTGTTTCTTC TTTTTTTTTTTGTGGAGTATGCATGTATAAGATGTTAATGAATTGGGGGGAGGAGAGAGA GAGAGATGGATGCATGGGTGAGGGGGTGAGTTGAGTGGTGAATTTCTGATGTACAGTACT ACAGGGGGATAAACTATCTCATGGTAGCAGCAGTGTTCTAGCT