Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0433200-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:21010736:21013557:1 gene:Os08g0433200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0433200-01)
Sequence

ATGGGAGTCCGTGAAGATTCAAGACCTTTGGGAGGTCTAGATGGACTCTACGGGGTACAA
CTTGCAGGCCGGTCAATGTACAGTGATGATGAAGCCGTCAAAACTAGCATTATAGATCCT
TTGGCTCGTGAACCGCAGGAGGGTGTTGGCACAAGCCGAAGATTGCTAATCCGGCGGCTC
TGGCAGCAGAGACCCCCATGTCTGAGGCCTATCCACTGTAGTCTCTCATGCGATAAACAT
CCGGGCGAAACTATTGCTAATGTTGTCACCTCTATTCCTTTCATTGTTCTTGGGCTGCAG
ACACCAAGAAAGAACTTGAACACTGCACTTTACGCGAACTCACTAATTGGAGTTGGAATA
GCTTCTAGTTTGTATCATACGTCAAGAGGACGAATCAGAAAATATATGCGATGGGCAGAC
TATACAATGATTGCCACTACAACACTTTGTTTAAGCAGAGCACTCCGAAATGAGCATCCA
AAATTACTGATGGCAGCATCCACATTGCTCCTACCTTTCCAGCCATTGGTGGTTTCAGCC
GTCCACACTGGGATAATGGAGGTTTCATTCGCGAAGCGAGCATCCATGGAACCAGAGCTC
AGGATGGCCCATAACCTACACAAGATGTCCTCCCTACTGGGAGGCGCGCTGTTCATCGCC
GACGACGCCTTCCCGGAGACCCCCTATCTCCATGCGGCATGGCATCTAGCTGCAGCATTG
GGGGTGGGCACATGCAACAAGCTTCTTGAATGA

Peptide Sequence

PEP ID

Os08t0433200-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:21010736:21013557:1 gene:Os08g0433200 transcript:Os08t0433200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0433200-01)
Sequence

MGVREDSRPLGGLDGLYGVQLAGRSMYSDDEAVKTSIIDPLAREPQEGVGTSRRLLIRRL
WQQRPPCLRPIHCSLSCDKHPGETIANVVTSIPFIVLGLQTPRKNLNTALYANSLIGVGI
ASSLYHTSRGRIRKYMRWADYTMIATTTLCLSRALRNEHPKLLMAASTLLLPFQPLVVSA
VHTGIMEVSFAKRASMEPELRMAHNLHKMSSLLGGALFIADDAFPETPYLHAAWHLAAAL
GVGTCNKLLE

Transcript Sequence

Transcript ID

Os08t0433200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:21010736:21013557:1 gene:Os08g0433200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0433200-01)
Sequence

GCTTCAGCTCTTCTTCTCCCCCACCACGAGGGAGGAGAAGATCCTGTCGGGATCGGAATC
CCCCCCTCCTCCTCCGCTCCTCGCCCTCTCCGTCGAGGAGGAGGCGGTGGTGGTGGTGGT
GGCGCGGCCGCTCCAACAATCGCGAGGTGAGGAGTACCATTTGTTCTTCTTAGTTAATAG
TGTTCACATAAATAAAGTGAATAAATGGGAGTCCGTGAAGATTCAAGACCTTTGGGAGGT
CTAGATGGACTCTACGGGGTACAACTTGCAGGCCGGTCAATGTACAGTGATGATGAAGCC
GTCAAAACTAGCATTATAGATCCTTTGGCTCGTGAACCGCAGGAGGGTGTTGGCACAAGC
CGAAGATTGCTAATCCGGCGGCTCTGGCAGCAGAGACCCCCATGTCTGAGGCCTATCCAC
TGTAGTCTCTCATGCGATAAACATCCGGGCGAAACTATTGCTAATGTTGTCACCTCTATT
CCTTTCATTGTTCTTGGGCTGCAGACACCAAGAAAGAACTTGAACACTGCACTTTACGCG
AACTCACTAATTGGAGTTGGAATAGCTTCTAGTTTGTATCATACGTCAAGAGGACGAATC
AGAAAATATATGCGATGGGCAGACTATACAATGATTGCCACTACAACACTTTGTTTAAGC
AGAGCACTCCGAAATGAGCATCCAAAATTACTGATGGCAGCATCCACATTGCTCCTACCT
TTCCAGCCATTGGTGGTTTCAGCCGTCCACACTGGGATAATGGAGGTTTCATTCGCGAAG
CGAGCATCCATGGAACCAGAGCTCAGGATGGCCCATAACCTACACAAGATGTCCTCCCTA
CTGGGAGGCGCGCTGTTCATCGCCGACGACGCCTTCCCGGAGACCCCCTATCTCCATGCG
GCATGGCATCTAGCTGCAGCATTGGGGGTGGGCACATGCAACAAGCTTCTTGAATGATCA
CGTCCTTCCTGCCTATCTAGGCTATAGCTAGTTTTCAACAACCAGTTGATATGAATATGA
TAGCATTATAGCAATACATCAACCTGCCGACACTGATCGCGTCACATTGTGTAGGTTCAC
ATTGAACCGGAGAAATATTGGCACAGTAGGGTAGACTGGTAGTGCATTCATAGCCAGGTG
TATATGGTACCATCTTGTGCCTGTATTACTGTATATTGTAGTCGTATGTTGTATTGTTGT
TCCGTGAATAATGTACCCTAGTATGTAAACTTTGGTCTCAAAGAAATATATATATCGTAG
CTAAACATGCATGTTC