Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0432800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:20974277:20977254:-1 gene:Os08g0432800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 038 description:Similar to BHLH transcription activator Ivory seed. (Os08t0432800-01)
Sequence	ATGTGGGAAGCTGTAGGCGGCGGCGACGGCACGGCTCTCCTGCCGTGGCCCGGCTCGGCC GCGGCCGCGCCGCTCTACATGCCCCCGGCAGCAGCGGCAGCGGCGCCCTTCGCCGCCGGC GAGCAGCTGCCGGTGGAGCAGCCCTTCTACTTCGACGGAGGCGGAGGCGTGGCGGGGCAT AATCACCATCCTCATCATCATCAGTACGGGATGGAGGCGCCGCCGCCGATGACGATGATG CAGATGGGCGGCGGGGGTTCGTCGTCGTCGAGGATGGTGGTGTCCGGGCTGCTCGGGACG CTGCAGGCGGAGCTCGGGAGGATGACGGCGAAGGAGATCATGGACGCCAAGGCGCTGGCG GCGTCGCGCAGCCACAGCGAGGCCGAGCGCCGCCGCCGCCAGCGCATCAACGGCCACCTC GCCAGGCTCCGCAGCCTCCTCCCCAACACCACCAAGACGGACAAGGCGTCGCTGCTGGCG GAGGTGATCGAGCACGTCAAGGAGCTGAAGCGGCAGACGTCGGCGATGATGGAGGACGGC GCCGCGGGAGGGGAGGCGGCGGCGGCGCCGGTGGTGCTGCTGCCGACGGAGGACGACGAG CTGGAGGTGGACGCGGCGGCGGACGAGGGAGGGAGGCTCGTGGCGAGGGCCTCGCTGTGC TGCGAGGACCGCGCCGACCTCATCCCGGGCATCGCCCGCGCGCTCGCCGCGCTCCGGCTG CGCGCCCGCCGCGCCGAGATCGCCACGCTCGGCGGCCGCGTCCGCAGCGTCCTCCTCATC GCCGCCGTCGAGGAGGAAGATCCAGACGAGGCCGGGAACGACGACGACGGCGAACACGGC TACGGCGTTGCCGCCTCGCACCGGAGGCACGAGCTCGTCGCGTCGATCCACGAGGCGCTG CGCGGCGTCATGAACCGCAAAGCGGCGAGCAGCGACACCTCCTCTTCCGGCGCCGGCGGC GGCGGTGGGAGCATCAAGAGGCAGCGGATGATCAGTGCACATGATCAGCAAGGTTCCTTC AATTCTAGTGGCTGGTAA

Peptide Sequence

PEP ID	Os08t0432800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:20974277:20977254:-1 gene:Os08g0432800 transcript:Os08t0432800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 038 description:Similar to BHLH transcription activator Ivory seed. (Os08t0432800-01)
Sequence	MWEAVGGGDGTALLPWPGSAAAAPLYMPPAAAAAAPFAAGEQLPVEQPFYFDGGGGVAGH NHHPHHHQYGMEAPPPMTMMQMGGGGSSSSRMVVSGLLGTLQAELGRMTAKEIMDAKALA ASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMMEDG AAGGEAAAAPVVLLPTEDDELEVDAAADEGGRLVARASLCCEDRADLIPGIARALAALRL RARRAEIATLGGRVRSVLLIAAVEEEDPDEAGNDDDGEHGYGVAASHRRHELVASIHEAL RGVMNRKAASSDTSSSGAGGGGGSIKRQRMISAHDQQGSFNSSGW

Transcript Sequence

Transcript ID	Os08t0432800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:20974277:20977254:-1 gene:Os08g0432800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 038 description:Similar to BHLH transcription activator Ivory seed. (Os08t0432800-01)
Sequence	GAAAAGCTAGAACAGCTGCTGCTGCGAGTTGTAGTAGTAGTAGAAGAAGAAAAAGCAAGA AAAGGTTGTTGCATAGATCGATCCATCGATGCGCACGATCGAGTTTATTAATTAGCTCAA CGAAAGAAGAAGCATCAGCAAGAAGAGCCAAGAACTCGATCGATCCAAGAAGGTAATTGA TCAGCTGATTGGTTGGTTTGGTTGTTGTGGTGGAGATGTGGGAAGCTGTAGGCGGCGGCG ACGGCACGGCTCTCCTGCCGTGGCCCGGCTCGGCCGCGGCCGCGCCGCTCTACATGCCCC CGGCAGCAGCGGCAGCGGCGCCCTTCGCCGCCGGCGAGCAGCTGCCGGTGGAGCAGCCCT TCTACTTCGACGGAGGCGGAGGCGTGGCGGGGCATAATCACCATCCTCATCATCATCAGT ACGGGATGGAGGCGCCGCCGCCGATGACGATGATGCAGATGGGCGGCGGGGGTTCGTCGT CGTCGAGGATGGTGGTGTCCGGGCTGCTCGGGACGCTGCAGGCGGAGCTCGGGAGGATGA CGGCGAAGGAGATCATGGACGCCAAGGCGCTGGCGGCGTCGCGCAGCCACAGCGAGGCCG AGCGCCGCCGCCGCCAGCGCATCAACGGCCACCTCGCCAGGCTCCGCAGCCTCCTCCCCA ACACCACCAAGACGGACAAGGCGTCGCTGCTGGCGGAGGTGATCGAGCACGTCAAGGAGC TGAAGCGGCAGACGTCGGCGATGATGGAGGACGGCGCCGCGGGAGGGGAGGCGGCGGCGG CGCCGGTGGTGCTGCTGCCGACGGAGGACGACGAGCTGGAGGTGGACGCGGCGGCGGACG AGGGAGGGAGGCTCGTGGCGAGGGCCTCGCTGTGCTGCGAGGACCGCGCCGACCTCATCC CGGGCATCGCCCGCGCGCTCGCCGCGCTCCGGCTGCGCGCCCGCCGCGCCGAGATCGCCA CGCTCGGCGGCCGCGTCCGCAGCGTCCTCCTCATCGCCGCCGTCGAGGAGGAAGATCCAG ACGAGGCCGGGAACGACGACGACGGCGAACACGGCTACGGCGTTGCCGCCTCGCACCGGA GGCACGAGCTCGTCGCGTCGATCCACGAGGCGCTGCGCGGCGTCATGAACCGCAAAGCGG CGAGCAGCGACACCTCCTCTTCCGGCGCCGGCGGCGGCGGTGGGAGCATCAAGAGGCAGC GGATGATCAGTGCACATGATCAGCAAGGTTCCTTCAATTCTAGTGGCTGGTAAAAACTCA AGTCGATCATCGATCCATCCATTAATTCCTGCAGCCTCATCAGAAGTAGCATGAAATATC CATGCTCTTGCTTATGCAACTCAACTTATATTAGTATAGTTATAAAGCTATATATAGCCG ACTTAAAAAAAACTTAGAGTTTGGATCTTCTTTTTGGTGTTATGGTGTGTGCATGAGGGA AATCAAAATTAAAGGAAGGAGAAAATTTG