Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0430200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:20797021:20801654:1 gene:Os08g0430200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rad23 description:UV excision repair protein Rad23 family protein. (Os08t0430200-01);Similar to DNA repair protein RAD23. (Os08t0430200-02)
Sequence	ATGAAGGTCTCCATCAAAACGCTCAAGGGCTCCAGCTTCGAGATCGACGTCGAGCCCACC AGCAAGGTCAGTGATGTTAAAAAGCTCATCGAGGTTACGCAAGGAGATAATGTCTACCCC GCTGATCAGCAAATGCTGATCCATCAAGGGAATGTCCTTAAAAACGACACAACACTTGAA GAGAACAAAGTTGTTGAGAACAACTTCATTGTGATAATGTTATCTAAGAAGGGATCATCA AGTGCTGCTTCAAGTACAGCTAAGGAGCCCACAAAACAGCCCTCAGTTGACCGGGCGATA CCCACTGCGCCTGCAACCCAACCACCTGCTCCACCAGCACCTGTTAGCGAGCCTGTGACT GCACCAGTTCCAACTGCAACAACTGCTTCAGCTCCAGCAGCTGCTGTCACCGCTGCATCC ACCGAAGCAGATAATTATGGTCAAGCTGCGTCGAACCTTGTTGCTGGAAGCAATTTAGAA GGGACTGTTCAGTCAATTCTTGAAATGGGTGGAGGAGCTTGGGACCGTGACACTGTTATG CGTGCTCTGCGAGCTGCATACAACAATCCAGAACGGGCTGTGGAGTATTTGTACACCGGG GTTCCTGAGCAAGCTGAGGCCCCTGCTGCAGTTCAAGCACTTCCTGTCCCTGCTGCAGTT CAAGCACTTCCTGTCCCTGCTGCAGTTCAACCAGTTGACCCAAGCCAGGCTCCCCAATCA GCTCAACTTTCAATTCCATCATCTGGACCCAATGCCAATCCATTGGACCTGTTTCCTCAG GTCCTTCCAAATGCTTCTGCAAATGCTGGTGGTGGAAATCTTGATGTTCTGCGAAACAAT TCACAGTTCCGTGGCTTGCTTTCTTTGGTGCAGGCTAACCCTCAAATTCTGCAGCCTTTG CTTCAAGAGTTGGGGAAACAAAATCCACAGATTTTGCAACTGATTCAGGAAAACCAGGCT GAGTTCCTGCGCTTAATCAACGAACCTGCAGAGGGAGCTGAAGGGAACTTGCTAGACCAG TTTGCTGCGGGAATGCCTCAAACAGTGGCTGTCACACCTGAGGAGAACGAAGCCATACAA CGTCTGGAACAAATGGGGTTTGATCGCGATCTGGTCCTGGAGGTATTCTTCGCGTGCAAC AAGGATGAGCTGTTGGCCGCAAACTATCTCTTGGACCACATGAACGAGTTCGACGACGAC GCCCCTGAACCACCGCAATAA

Peptide Sequence

PEP ID	Os08t0430200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:20797021:20801654:1 gene:Os08g0430200 transcript:Os08t0430200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rad23 description:UV excision repair protein Rad23 family protein. (Os08t0430200-01);Similar to DNA repair protein RAD23. (Os08t0430200-02)
Sequence	MKVSIKTLKGSSFEIDVEPTSKVSDVKKLIEVTQGDNVYPADQQMLIHQGNVLKNDTTLE ENKVVENNFIVIMLSKKGSSSAASSTAKEPTKQPSVDRAIPTAPATQPPAPPAPVSEPVT APVPTATTASAPAAAVTAASTEADNYGQAASNLVAGSNLEGTVQSILEMGGGAWDRDTVM RALRAAYNNPERAVEYLYTGVPEQAEAPAAVQALPVPAAVQALPVPAAVQPVDPSQAPQS AQLSIPSSGPNANPLDLFPQVLPNASANAGGGNLDVLRNNSQFRGLLSLVQANPQILQPL LQELGKQNPQILQLIQENQAEFLRLINEPAEGAEGNLLDQFAAGMPQTVAVTPEENEAIQ RLEQMGFDRDLVLEVFFACNKDELLAANYLLDHMNEFDDDAPEPPQ

Transcript Sequence

Transcript ID	Os08t0430200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:20797021:20801654:1 gene:Os08g0430200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rad23 description:UV excision repair protein Rad23 family protein. (Os08t0430200-01);Similar to DNA repair protein RAD23. (Os08t0430200-02)
Sequence	CTTTCCCCTTCTCCGCTCCTCCTCCCCCTCGCGAGCTCGGCGGCGGGCGGCGGCGGCGGC GCGATGAAGGTCTCCATCAAAACGCTCAAGGGCTCCAGCTTCGAGATCGACGTCGAGCCC ACCAGCAAGGTCAGTGATGTTAAAAAGCTCATCGAGGTTACGCAAGGAGATAATGTCTAC CCCGCTGATCAGCAAATGCTGATCCATCAAGGGAATGTCCTTAAAAACGACACAACACTT GAAGAGAACAAAGTTGTTGAGAACAACTTCATTGTGATAATGTTATCTAAGAAGGGATCA TCAAGTGCTGCTTCAAGTACAGCTAAGGAGCCCACAAAACAGCCCTCAGTTGACCGGGCG ATACCCACTGCGCCTGCAACCCAACCACCTGCTCCACCAGCACCTGTTAGCGAGCCTGTG ACTGCACCAGTTCCAACTGCAACAACTGCTTCAGCTCCAGCAGCTGCTGTCACCGCTGCA TCCACCGAAGCAGATAATTATGGTCAAGCTGCGTCGAACCTTGTTGCTGGAAGCAATTTA GAAGGGACTGTTCAGTCAATTCTTGAAATGGGTGGAGGAGCTTGGGACCGTGACACTGTT ATGCGTGCTCTGCGAGCTGCATACAACAATCCAGAACGGGCTGTGGAGTATTTGTACACC GGGGTTCCTGAGCAAGCTGAGGCCCCTGCTGCAGTTCAAGCACTTCCTGTCCCTGCTGCA GTTCAAGCACTTCCTGTCCCTGCTGCAGTTCAACCAGTTGACCCAAGCCAGGCTCCCCAA TCAGCTCAACTTTCAATTCCATCATCTGGACCCAATGCCAATCCATTGGACCTGTTTCCT CAGGTCCTTCCAAATGCTTCTGCAAATGCTGGTGGTGGAAATCTTGATGTTCTGCGAAAC AATTCACAGTTCCGTGGCTTGCTTTCTTTGGTGCAGGCTAACCCTCAAATTCTGCAGCCT TTGCTTCAAGAGTTGGGGAAACAAAATCCACAGATTTTGCAACTGATTCAGGAAAACCAG GCTGAGTTCCTGCGCTTAATCAACGAACCTGCAGAGGGAGCTGAAGGGAACTTGCTAGAC CAGTTTGCTGCGGGAATGCCTCAAACAGTGGCTGTCACACCTGAGGAGAACGAAGCCATA CAACGTCTGGAACAAATGGGGTTTGATCGCGATCTGGTCCTGGAGGTATTCTTCGCGTGC AACAAGGATGAGCTGTTGGCCGCAAACTATCTCTTGGACCACATGAACGAGTTCGACGAC GACGCCCCTGAACCACCGCAATAAGATGACTGACCCGTTTTTAATGATACATGCCAGTCA CACAAGAGACATTGGGTTGCAAACAGTGGTCACCAAGACTGGTGATTATCCCCGTTTTAG AACATCCAAATCCACCCATCCATCCAGGCGTGAGAAAAATGTTTTTGAGCTTCTCTCATC ATCATTCTTTTTTCTGCTTTGGGATTTTTATGATGATTAGTACATACTCTAGATGACATT TACAGACTACATATAACCAAATGTT