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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0427700-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:20573199:20573985:1 gene:Os08g0427700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone H2A. (Os08t0427700-00)
Sequence

ATGGCTGGTAGGGGCAAGGCGATCGGCTCGAGCGCCGCCAAGAAGGCCACGTCGCGGAGC
TCCAAGGCCGGGCTCCAGTTCCCCGTCGGCAGGATCGCCCGCTTCCTCAAGGCCGGCAAG
TACGCCGAGCGCGTCGGCGCCGGCGCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTC
GCCGCCGAGGTTCTTGAGCTCGCCGGGAACGCGGCGCGGGACAACAAGAAGACGCGGATC
GTGCCGAGGCACATCCAGCTCGCCGTGCGCAACGACGAGGAGCTGTCGCGCCTGCTCGGC
GCCGTCACCATCGCCAACGGCGGCGTCATGCCCAACATCCACAACCTGCTCCTCCCCAAG
AAGGCCGGCTCCAGCGCCAAGGCCGCCGCCGCCGACGACGAGTAG

Peptide Sequence

PEP ID

Os08t0427700-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:20573199:20573985:1 gene:Os08g0427700 transcript:Os08t0427700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone H2A. (Os08t0427700-00)
Sequence

MAGRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPK
KAGSSAKAAAADDE

Transcript Sequence

Transcript ID

Os08t0427700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:20573199:20573985:1 gene:Os08g0427700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone H2A. (Os08t0427700-00)
Sequence

CAACCCAATCCACTCCACTCCACCGCCGCTCGCTCGCCGCCGCCGCCGCGTCGTCGTCGT
CTCCGGCCTCCGCTTCCTCGCCGACGGAATCCTAGCTTAGCCATGGCTGGTAGGGGCAAG
GCGATCGGCTCGAGCGCCGCCAAGAAGGCCACGTCGCGGAGCTCCAAGGCCGGGCTCCAG
TTCCCCGTCGGCAGGATCGCCCGCTTCCTCAAGGCCGGCAAGTACGCCGAGCGCGTCGGC
GCCGGCGCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCCGAGGTTCTTGAG
CTCGCCGGGAACGCGGCGCGGGACAACAAGAAGACGCGGATCGTGCCGAGGCACATCCAG
CTCGCCGTGCGCAACGACGAGGAGCTGTCGCGCCTGCTCGGCGCCGTCACCATCGCCAAC
GGCGGCGTCATGCCCAACATCCACAACCTGCTCCTCCCCAAGAAGGCCGGCTCCAGCGCC
AAGGCCGCCGCCGCCGACGACGAGTAGAGACGAACACAGATTCCTCACTATGACGAACAC
TACATGCTTCCTTCCGCCGATGGATTAGACAATAGGCATCCTGCTTAATTTAGTTTTTAA
TTGTGCTTGTTTCGTAGACAAGGGATTAGTTGCTCTGTAATTGGTGTTAATTTATATGAA
ATAGTGTCATCTTTCTCGATGACTTTTGTC