Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0424500-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:20381557:20385975:1 gene:Os08g0424500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCENTED KERNEL 2 description:Betaine aldehyde dehydrogenase, Rice fragrance (Os08t0424500-01);Similar to Betaine aldehyde dehydrogenase. (Os08t0424500-02)
Sequence

GCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCA
CCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTA
GTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCT
GCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGT
TTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTG
ACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTT
GCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTT
AAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGAT
GTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCAGATTTGC
AGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATG
GTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGG
CCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCCAAAAGC
CAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGTTTCTAT
ATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTT
TTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAATTGGCC
AACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAG
AGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTC
TGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGG
GGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGG
GGATGGTACAAATCCCCTTCCAAGCTGTAA

Peptide Sequence

PEP ID

Os08t0424500-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:20381557:20385975:1 gene:Os08g0424500 transcript:Os08t0424500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCENTED KERNEL 2 description:Betaine aldehyde dehydrogenase, Rice fragrance (Os08t0424500-01);Similar to Betaine aldehyde dehydrogenase. (Os08t0424500-02)
Sequence

AGCFEYFADLAESLDKRQNAPVSLPMENFKCYLRKEPIGVVGLITPWNYPLLMATWKVAP
ALAAGCTAVLKPSELASVTCLELADVCKEVGLPSGVLNIVTGLGSEAGAPLSSHPGVDKV
AFTGSYETGKKIMASAAPMVKPVSLELGGKSPIVVFDDVDVEKAVEWTLFGCFWTNGQIC
SATSRLILHKKIAKEFQERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKQFVSTAKS
QGATILTGGVRPKHLEKGFYIEPTIITDVDTSMQIWREEVFGPVLCVKEFSTEEEAIELA
NDTHYGLAGAVLSGDRERCQRLTEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEG
GIDNYLSVKQVTEYASDEPWGWYKSPSKL

Transcript Sequence

Transcript ID

Os08t0424500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:20381557:20385975:1 gene:Os08g0424500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCENTED KERNEL 2 description:Betaine aldehyde dehydrogenase, Rice fragrance (Os08t0424500-01);Similar to Betaine aldehyde dehydrogenase. (Os08t0424500-02)
Sequence

GCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCA
CCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTA
GTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCT
GCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGT
TTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTG
ACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTT
GCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTT
AAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGAT
GTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCAGATTTGC
AGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATG
GTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGG
CCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCCAAAAGC
CAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGTTTCTAT
ATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTT
TTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAATTGGCC
AACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAG
AGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTC
TGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGG
GGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGG
GGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCA
TCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATC
GATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACT