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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0424100-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:20351105:20352478:1 gene:Os08g0424100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 5 description:Similar to carbonic anhydrase. (Os08t0424100-00)
Sequence

ATGCATCGCGCACGCCTCCTCGTCGTCGTCGTCACCGCCGTCGTCACCCTCCTGCTCCTG
GCGCCGGCCGCCGGAGCCGAGGAAGACGATCAGTTCGGCTACATCCCCGGCACACCGAGG
GGGCCGGAGAACTGGGGCAGCCTGAAGCCGGAATGGGCCACCTGCAGCAGCGGCGAGATG
CAGTCGCCGATCAACCTCGGCCTCCTCGACCTCACCCTGGCCCCCGGCCTCGGCGACCTC
AACTACACCTACCGAAACGCCAACGCCACCGTCGTCAACCGTGGCCACGACATCATGGTC
AGGTTCGACGGCGGCGATGACGCCGCCGCCGCCGGCGGGCTGGTGATTAACGGCACGGCG
TACCGGCTCCGGCAGGTGCACTGGCACGCGCCGTCGGAGCACGCCGTCGATGGCCGGAGG
TACGACATGGAGCTGCACATGGTGCATCTCAACACCCAGAACCAGACCGCCGTCGTCGGC
ATCCTCTACGCCATCGGCGCCCAGGATGAGTTCCTGCACAAGTTGGAGCCATATATTATT
GAAGTTGCAGACCAAAAAGATAAGGAGAAGATTGTCAATGGTGGGGTGGATCCAAACGTG
GCCAAAGAGCATGATATCGTGTATTACCGCTACATGGGCTCCTTAACCACACCACCTTGC
ACCGAGGGAGTTATCTGGACCATTGTCAGGAAGATGAAGAGGTTCTAA

Peptide Sequence

PEP ID

Os08t0424100-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:20351105:20352478:1 gene:Os08g0424100 transcript:Os08t0424100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 5 description:Similar to carbonic anhydrase. (Os08t0424100-00)
Sequence

MHRARLLVVVVTAVVTLLLLAPAAGAEEDDQFGYIPGTPRGPENWGSLKPEWATCSSGEM
QSPINLGLLDLTLAPGLGDLNYTYRNANATVVNRGHDIMVRFDGGDDAAAAGGLVINGTA
YRLRQVHWHAPSEHAVDGRRYDMELHMVHLNTQNQTAVVGILYAIGAQDEFLHKLEPYII
EVADQKDKEKIVNGGVDPNVAKEHDIVYYRYMGSLTTPPCTEGVIWTIVRKMKRF

Transcript Sequence

Transcript ID

Os08t0424100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:20351105:20352478:1 gene:Os08g0424100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 5 description:Similar to carbonic anhydrase. (Os08t0424100-00)
Sequence

ATGCATCGCGCACGCCTCCTCGTCGTCGTCGTCACCGCCGTCGTCACCCTCCTGCTCCTG
GCGCCGGCCGCCGGAGCCGAGGAAGACGATCAGTTCGGCTACATCCCCGGCACACCGAGG
GGGCCGGAGAACTGGGGCAGCCTGAAGCCGGAATGGGCCACCTGCAGCAGCGGCGAGATG
CAGTCGCCGATCAACCTCGGCCTCCTCGACCTCACCCTGGCCCCCGGCCTCGGCGACCTC
AACTACACCTACCGAAACGCCAACGCCACCGTCGTCAACCGTGGCCACGACATCATGGTC
AGGTTCGACGGCGGCGATGACGCCGCCGCCGCCGGCGGGCTGGTGATTAACGGCACGGCG
TACCGGCTCCGGCAGGTGCACTGGCACGCGCCGTCGGAGCACGCCGTCGATGGCCGGAGG
TACGACATGGAGCTGCACATGGTGCATCTCAACACCCAGAACCAGACCGCCGTCGTCGGC
ATCCTCTACGCCATCGGCGCCCAGGATGAGTTCCTGCACAAGTTGGAGCCATATATTATT
GAAGTTGCAGACCAAAAAGATAAGGAGAAGATTGTCAATGGTGGGGTGGATCCAAACGTG
GCCAAAGAGCATGATATCGTGTATTACCGCTACATGGGCTCCTTAACCACACCACCTTGC
ACCGAGGGAGTTATCTGGACCATTGTCAGGAAGATGAAGAGGTTCTAA