Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0423600-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:20312492:20314719:1 gene:Os08g0423600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 4 description:Similar to carbonic anhydrase. (Os08t0423600-00)
Sequence

ATGAACGAACACGTAGCTAGCTACCTTGCTGGCCCCTGTATAAATACCCCTATATACCCT
AGCTCTACCAGCCAGCCAAACAGTAGCAACATGAGTTCAGCTCGCCGCCTCCTCCTCCTC
GCCGGCGCCGCTGCCGCCATCGCACTCCTGCTCTCGGCCACTGCCCCGGTGGCCGGAGCC
GAGGACGACGGCTACAGCTACATCCCTGGCTCGCCCAGGGGGCCGCAGAACTGGGGCAGC
CTGAAACCGGAATGGGCCACCTGCAGCAGCGGTAAGATGCAGTCGCCAATCAACCTCGGC
CTCCTCGACCTCACCTTGGCTCCCGGCCTCGGCAACCTCAACTACACCTACAAGAACGCC
AACGCCTCCGTCGTCAACCGTGGCCACGACATCATGGTTAGGTTTGACGGCGACGCTGGT
AGCCTAAAGATAAATGGCACGGCGTACCAGCTCCGGCAAATGCACTGGCATACGCCGTCG
GAGCACACCATCGATGGCCGGAGGTATGACATGGAGCTACATATGGTGCACCTCAATGCC
CAGAACCAGGCCGCCGTCATTGGCATCCTCTACACCATCGGCACCACCCCGGACGAGTTT
CTGCAAAAGATGGAGCCTTATATAATTGCGATATCAAACCAAGAAGGTAAAGAGAAGATG
GTCGTTGGTGGGGCGGATCCAAATGTAGCCAAGGGAAAGGATACCGTGTACTATCGCTAC
ATGGGCTCCTTTACCACACCACCTTGCACGGAGGGGGTCATCTGGACCGTTGTCAGGAAG
GTGCACACCGTGTCACTGTCCCAAATCACACTTCTCAAGGCAGCTGTGCTCATGGGTAAT
GAGAACAACGCGAGACCCCTCCAGGATGTGAACAACAGGGAGATTGACCTGTTCTTTCCT
CTTCCTCTGATCAATAACTGA

Peptide Sequence

PEP ID

Os08t0423600-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:20312492:20314719:1 gene:Os08g0423600 transcript:Os08t0423600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 4 description:Similar to carbonic anhydrase. (Os08t0423600-00)
Sequence

MNEHVASYLAGPCINTPIYPSSTSQPNSSNMSSARRLLLLAGAAAAIALLLSATAPVAGA
EDDGYSYIPGSPRGPQNWGSLKPEWATCSSGKMQSPINLGLLDLTLAPGLGNLNYTYKNA
NASVVNRGHDIMVRFDGDAGSLKINGTAYQLRQMHWHTPSEHTIDGRRYDMELHMVHLNA
QNQAAVIGILYTIGTTPDEFLQKMEPYIIAISNQEGKEKMVVGGADPNVAKGKDTVYYRY
MGSFTTPPCTEGVIWTVVRKVHTVSLSQITLLKAAVLMGNENNARPLQDVNNREIDLFFP
LPLINN

Transcript Sequence

Transcript ID

Os08t0423600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:20312492:20314719:1 gene:Os08g0423600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 4 description:Similar to carbonic anhydrase. (Os08t0423600-00)
Sequence

ATGAACGAACACGTAGCTAGCTACCTTGCTGGCCCCTGTATAAATACCCCTATATACCCT
AGCTCTACCAGCCAGCCAAACAGTAGCAACATGAGTTCAGCTCGCCGCCTCCTCCTCCTC
GCCGGCGCCGCTGCCGCCATCGCACTCCTGCTCTCGGCCACTGCCCCGGTGGCCGGAGCC
GAGGACGACGGCTACAGCTACATCCCTGGCTCGCCCAGGGGGCCGCAGAACTGGGGCAGC
CTGAAACCGGAATGGGCCACCTGCAGCAGCGGTAAGATGCAGTCGCCAATCAACCTCGGC
CTCCTCGACCTCACCTTGGCTCCCGGCCTCGGCAACCTCAACTACACCTACAAGAACGCC
AACGCCTCCGTCGTCAACCGTGGCCACGACATCATGGTTAGGTTTGACGGCGACGCTGGT
AGCCTAAAGATAAATGGCACGGCGTACCAGCTCCGGCAAATGCACTGGCATACGCCGTCG
GAGCACACCATCGATGGCCGGAGGTATGACATGGAGCTACATATGGTGCACCTCAATGCC
CAGAACCAGGCCGCCGTCATTGGCATCCTCTACACCATCGGCACCACCCCGGACGAGTTT
CTGCAAAAGATGGAGCCTTATATAATTGCGATATCAAACCAAGAAGGTAAAGAGAAGATG
GTCGTTGGTGGGGCGGATCCAAATGTAGCCAAGGGAAAGGATACCGTGTACTATCGCTAC
ATGGGCTCCTTTACCACACCACCTTGCACGGAGGGGGTCATCTGGACCGTTGTCAGGAAG
GTGCACACCGTGTCACTGTCCCAAATCACACTTCTCAAGGCAGCTGTGCTCATGGGTAAT
GAGAACAACGCGAGACCCCTCCAGGATGTGAACAACAGGGAGATTGACCTGTTCTTTCCT
CTTCCTCTGATCAATAACTGAACG