Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0422000-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:20213974:20218785:1 gene:Os08g0422000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CM0545.530.nc protein (Fragment). (Os08t0422000-01);Similar to CM0545.530.nc protein (Fragment). (Os08t0422000-02)
Sequence	AGTAAAGGTGAAATTTGGGTGGAGAACATCCTTAATCTTGGAATTTCGCCTGCTAAACTT GTTGAGATCATGAAAGAACGCTTCGTTTCTTCAGGAGGAGCCATATTTGAGGGGAAAAGT TTGTCAAGCATTTCTGTTCATGATGACTTTGCTGTATTAAACTTGAGTGATGGTGGTTCT CTGCCTTGTCGACTTGTTATTGATGCTATGGGTAATTTTTCCCCAATTGTGCGACAGATC CGGTCAGGCAGAAAACCAGATGGAGTATGCCTTGTTGTTGGTACTTGTGCTCGTGGATTT GACAGAAATACAACAAGTGACATTATTTTCAGTAGCTCATCCATAAAGAGAGCAGGAAAT TCAGGAGTACAACTGTTCTGGGAGGGTTTTCCTGCTGGTTCTGGTCCCACGGATCGCACT ACATACATGTTCACCTATGTTGATCCACATTCTGGGGGCCCAAAGCTAGAAGAACTTTTG GAGACGTTCTGGGATCTTATGCCTGCTTACGAGGATGTGGTTCTTGAAAACCTGGATATA ATGAGAGTCATATTTGGAATTTTCCCAACCTATCGGAATAGCCCCTTGCCAGCTGCATTT GACCGTGTCTTGCAGGTTGGTGATGCTAGTGGAATCCAGTCACCTGTTTCTTTTGGAGGT TTTGGAAGCTTGACAAGGCATCTTGGTCGTTTGTCAAATGGTATATATGAAGCAGTTTCA GGAGATCTTCTGGATGCACGTAGTTTGCAGCTGCTGAACCCTTATATGCCAAATTTAAGT GCATCATGGTTGTTCCAAAGAGCAATGTCAGCAAGGCCGCAGATCGATGTTTCCCCAACT TTTATCAATGAGCTTCTCTTTGCTAATTTTGAGTCGATGCAGAAACTTGGGGATTCAGTA CTTCGGCCATTTCTCCAGGATGTAATACAATTTGGACCTCTGGTTAAAACTCTGGGTCTA GTAATGATCACTCGACCACAGATTTTGCCTTCCATTTTTAAGCAGGCTGGACCTGGAGTC ATTCTTAACTGGTCAGGCCATTTTGTGATGCTTGGTTACTATACATTCCTTTCCACCTTT ATAGACCCAATCCTCAGGCCTTGGGTTGAATCCTTGCCATTGAGGAACAAATATCAATGG AAACGATATCTCGAAGCATGGAAGTATGGAGCTGGCTTAGATTATCGCCAAGGGGAATAA

Peptide Sequence

PEP ID	Os08t0422000-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:20213974:20218785:1 gene:Os08g0422000 transcript:Os08t0422000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CM0545.530.nc protein (Fragment). (Os08t0422000-01);Similar to CM0545.530.nc protein (Fragment). (Os08t0422000-02)
Sequence	SKGEIWVENILNLGISPAKLVEIMKERFVSSGGAIFEGKSLSSISVHDDFAVLNLSDGGS LPCRLVIDAMGNFSPIVRQIRSGRKPDGVCLVVGTCARGFDRNTTSDIIFSSSSIKRAGN SGVQLFWEGFPAGSGPTDRTTYMFTYVDPHSGGPKLEELLETFWDLMPAYEDVVLENLDI MRVIFGIFPTYRNSPLPAAFDRVLQVGDASGIQSPVSFGGFGSLTRHLGRLSNGIYEAVS GDLLDARSLQLLNPYMPNLSASWLFQRAMSARPQIDVSPTFINELLFANFESMQKLGDSV LRPFLQDVIQFGPLVKTLGLVMITRPQILPSIFKQAGPGVILNWSGHFVMLGYYTFLSTF IDPILRPWVESLPLRNKYQWKRYLEAWKYGAGLDYRQGE

Transcript Sequence

Transcript ID	Os08t0422000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:20213974:20218785:1 gene:Os08g0422000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CM0545.530.nc protein (Fragment). (Os08t0422000-01);Similar to CM0545.530.nc protein (Fragment). (Os08t0422000-02)
Sequence	AGAGTAAAGGTGAAATTTGGGTGGAGAACATCCTTAATCTTGGAATTTCGCCTGCTAAAC TTGTTGAGATCATGAAAGAACGCTTCGTTTCTTCAGGAGGAGCCATATTTGAGGGGAAAA GTTTGTCAAGCATTTCTGTTCATGATGACTTTGCTGTATTAAACTTGAGTGATGGTGGTT CTCTGCCTTGTCGACTTGTTATTGATGCTATGGGTAATTTTTCCCCAATTGTGCGACAGA TCCGGTCAGGCAGAAAACCAGATGGAGTATGCCTTGTTGTTGGTACTTGTGCTCGTGGAT TTGACAGAAATACAACAAGTGACATTATTTTCAGTAGCTCATCCATAAAGAGAGCAGGAA ATTCAGGAGTACAACTGTTCTGGGAGGGTTTTCCTGCTGGTTCTGGTCCCACGGATCGCA CTACATACATGTTCACCTATGTTGATCCACATTCTGGGGGCCCAAAGCTAGAAGAACTTT TGGAGACGTTCTGGGATCTTATGCCTGCTTACGAGGATGTGGTTCTTGAAAACCTGGATA TAATGAGAGTCATATTTGGAATTTTCCCAACCTATCGGAATAGCCCCTTGCCAGCTGCAT TTGACCGTGTCTTGCAGGTTGGTGATGCTAGTGGAATCCAGTCACCTGTTTCTTTTGGAG GTTTTGGAAGCTTGACAAGGCATCTTGGTCGTTTGTCAAATGGTATATATGAAGCAGTTT CAGGAGATCTTCTGGATGCACGTAGTTTGCAGCTGCTGAACCCTTATATGCCAAATTTAA GTGCATCATGGTTGTTCCAAAGAGCAATGTCAGCAAGGCCGCAGATCGATGTTTCCCCAA CTTTTATCAATGAGCTTCTCTTTGCTAATTTTGAGTCGATGCAGAAACTTGGGGATTCAG TACTTCGGCCATTTCTCCAGGATGTAATACAATTTGGACCTCTGGTTAAAACTCTGGGTC TAGTAATGATCACTCGACCACAGATTTTGCCTTCCATTTTTAAGCAGGCTGGACCTGGAG TCATTCTTAACTGGTCAGGCCATTTTGTGATGCTTGGTTACTATACATTCCTTTCCACCT TTATAGACCCAATCCTCAGGCCTTGGGTTGAATCCTTGCCATTGAGGAACAAATATCAAT GGAAACGATATCTCGAAGCATGGAAGTATGGAGCTGGCTTAGATTATCGCCAAGGGGAAT AATCAGCTTCTTTTGGAATTAGTCTATATTTCATTGAGAAAGAAATACATACAGATAAAG GAACATATATACCTTTTCTATTAGGTCAAATCACTGTACAGTGTAGATACAAAGAAAATT TCTTTCTTTTTTCAGACCAAGACAGTGAATAACATGTTAGTTATTGAGAACAAGTAATAT GCGGTTCACTTGTAAGTACATATTATTAACTGAAGTGAATATGTAATGTCTACATTTTC