Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0421850-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:20195730:20197487:-1 gene:Os08g0421850 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 17, U-box protein 17 description:Similar to ubiquitin-protein ligase. (Os08t0421850-00)
Sequence	ATGGGGGCTCCCCGCGCGCGGCGGTGGAAGCTGCTGCTCCCGCCCTTCCACTCCGCCAAG CGCAAGCCGCCGCTGCCGCCCCCTCCGCCGGCGCCAGTGGCTGTGGCTCCGGCCCCGGGG AAGGAGGAGGAGGAGGAGGTGATGCCGGAGGAGTTCCTGTGCCCGATCTCGGGGGCACCC ATGGCCGACCCGGTCATCCTGCCGCCGGGGAGGACGTACGAGCGCGCCTGCGTCGACGCG TGCGCGGGCCTCTCGCTCTGCCCGCCCGGCGCCTCGGCGGCAACGGCGGCCGCGATACCC AACGACGCGCTCAGGGCGGCCATACGGACGTGGTGCGCGCGGCACGGGCGCGCGCCGCCT GCGCCGCCTTCCGCCGCGGAGGCGCGGGAGGCGGCGCTCCTCCGCGCGGTGCCTGCGGCT GCGGCGAGGACAACGACGGTGGCGGCGATGGTGCCCGCGAGGTCGTCGTCCAACCTGTCG TGCTCCTCCCGGGCGTCCGCCGCGTCCACGTCTTCGTCCGGGTCGTCGTCGGAGATGGCT ACGGTGGAGGTCCCGCGCGCGAAGGAGGTGGCGGAGTTGCGGGTCGCTGAAGCGGAGGAG GAGATGGAGAAGGAGAAGGAGGTGGCGGTGTTGCGTGTCGCTGAAGCGGAGGAGGAGAAG GAGGTGGCGGTGCTGCGGGTCGCTGAAGCGAAGGAGGAGGAGGAGGAGGTGGTGATGGTG GTGGCGAAGGTGGTAGAGAAAGGGGACGAGGATCAGGTGGAGGCGGCCATGGCGGTGCTG CTGCGGGAGACGCGGGAGAGCGAGGAGAGGAGGCGAGCGCTCTGCGTGCCGCGGCTACTC GCCGCGCTTCGCCGCGTGCTGCACTCCAAGCGGCACACACCCAAGGCGCACGCCGACGCC GCCGCGGCGCTGGCCAACCTCACCAACGAGCCGGAGAACAGGATCCCCATCGTCCGCGCG GGCGCCGTTACGGCGCTCGTCGAGGTGCTCTCCTTGGGCACCGCATCACCGGAGGCCTGC GAGCACGCGGCCGGCGCGCTCTTCGGCCTCGCGCTGGACGAGGAGAACCGCGCCGCCATC GGCGTTCTCGGCGCCGTCCAGCCACTACTCGACCTCTTCACATCCCGAGACCACGCCCCG CGCGCGCGCCGCGACGCCGGCATGGCGCTGTATCACCTCTCCCTCTCCGCCGTGAACCAA TCCAAGCTCGCCCGCGCCCCGGCCGCGGCCAAGAACCTGCTCTCCATCGCGTCGGACTCC ACCACAGCCGAGCCCATGCCCATCCGCCGGCTGGCGCTCATGGTGATCTGCAACCTGGCC AAGTGCGCGGAAGGCCGGGCCGCGCTGATGGACACGGGCGCCGTGGCGACGGTCTCCGCC ATCCTCTCCGACGACACCCACCGCTCCGAGCTGGAGGAGCTCTGCGTCGTGGCATTGTTC GGCATGAGCAGGGGGAACCCGCGGTTCCGGGGGCTCGCCAGAGCGGCCGGCGCGGACCGA CCCCTCATCCTCATCTCCGAGCGAGCGCCCGCCGGCGCGCACAAGGAGATGGCGCGGAAG GCGCTGCGCGTCGTGCTCGGCCTGGGCGACGACAGCGAGCGCGACCTGCCGGACTTCATG AACAGTGCACGCAACGTCAACGGCATCGCCGGTTCATCCGTGCCGGTCCATCGCCGGCGC GCCGCGAGCTGGGCGGCGGCTCCTCCTGCCCAGACACCACCGAATGCCCATCAATGGCGA TCAGTATGCATCGATTGA

Peptide Sequence

PEP ID	Os08t0421850-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:20195730:20197487:-1 gene:Os08g0421850 transcript:Os08t0421850-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 17, U-box protein 17 description:Similar to ubiquitin-protein ligase. (Os08t0421850-00)
Sequence	MGAPRARRWKLLLPPFHSAKRKPPLPPPPPAPVAVAPAPGKEEEEEVMPEEFLCPISGAP MADPVILPPGRTYERACVDACAGLSLCPPGASAATAAAIPNDALRAAIRTWCARHGRAPP APPSAAEAREAALLRAVPAAAARTTTVAAMVPARSSSNLSCSSRASAASTSSSGSSSEMA TVEVPRAKEVAELRVAEAEEEMEKEKEVAVLRVAEAEEEKEVAVLRVAEAKEEEEEVVMV VAKVVEKGDEDQVEAAMAVLLRETRESEERRRALCVPRLLAALRRVLHSKRHTPKAHADA AAALANLTNEPENRIPIVRAGAVTALVEVLSLGTASPEACEHAAGALFGLALDEENRAAI GVLGAVQPLLDLFTSRDHAPRARRDAGMALYHLSLSAVNQSKLARAPAAAKNLLSIASDS TTAEPMPIRRLALMVICNLAKCAEGRAALMDTGAVATVSAILSDDTHRSELEELCVVALF GMSRGNPRFRGLARAAGADRPLILISERAPAGAHKEMARKALRVVLGLGDDSERDLPDFM NSARNVNGIAGSSVPVHRRRAASWAAAPPAQTPPNAHQWRSVCID

Transcript Sequence

Transcript ID	Os08t0421850-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:20195730:20197487:-1 gene:Os08g0421850 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 17, U-box protein 17 description:Similar to ubiquitin-protein ligase. (Os08t0421850-00)
Sequence	ATGGGGGCTCCCCGCGCGCGGCGGTGGAAGCTGCTGCTCCCGCCCTTCCACTCCGCCAAG CGCAAGCCGCCGCTGCCGCCCCCTCCGCCGGCGCCAGTGGCTGTGGCTCCGGCCCCGGGG AAGGAGGAGGAGGAGGAGGTGATGCCGGAGGAGTTCCTGTGCCCGATCTCGGGGGCACCC ATGGCCGACCCGGTCATCCTGCCGCCGGGGAGGACGTACGAGCGCGCCTGCGTCGACGCG TGCGCGGGCCTCTCGCTCTGCCCGCCCGGCGCCTCGGCGGCAACGGCGGCCGCGATACCC AACGACGCGCTCAGGGCGGCCATACGGACGTGGTGCGCGCGGCACGGGCGCGCGCCGCCT GCGCCGCCTTCCGCCGCGGAGGCGCGGGAGGCGGCGCTCCTCCGCGCGGTGCCTGCGGCT GCGGCGAGGACAACGACGGTGGCGGCGATGGTGCCCGCGAGGTCGTCGTCCAACCTGTCG TGCTCCTCCCGGGCGTCCGCCGCGTCCACGTCTTCGTCCGGGTCGTCGTCGGAGATGGCT ACGGTGGAGGTCCCGCGCGCGAAGGAGGTGGCGGAGTTGCGGGTCGCTGAAGCGGAGGAG GAGATGGAGAAGGAGAAGGAGGTGGCGGTGTTGCGTGTCGCTGAAGCGGAGGAGGAGAAG GAGGTGGCGGTGCTGCGGGTCGCTGAAGCGAAGGAGGAGGAGGAGGAGGTGGTGATGGTG GTGGCGAAGGTGGTAGAGAAAGGGGACGAGGATCAGGTGGAGGCGGCCATGGCGGTGCTG CTGCGGGAGACGCGGGAGAGCGAGGAGAGGAGGCGAGCGCTCTGCGTGCCGCGGCTACTC GCCGCGCTTCGCCGCGTGCTGCACTCCAAGCGGCACACACCCAAGGCGCACGCCGACGCC GCCGCGGCGCTGGCCAACCTCACCAACGAGCCGGAGAACAGGATCCCCATCGTCCGCGCG GGCGCCGTTACGGCGCTCGTCGAGGTGCTCTCCTTGGGCACCGCATCACCGGAGGCCTGC GAGCACGCGGCCGGCGCGCTCTTCGGCCTCGCGCTGGACGAGGAGAACCGCGCCGCCATC GGCGTTCTCGGCGCCGTCCAGCCACTACTCGACCTCTTCACATCCCGAGACCACGCCCCG CGCGCGCGCCGCGACGCCGGCATGGCGCTGTATCACCTCTCCCTCTCCGCCGTGAACCAA TCCAAGCTCGCCCGCGCCCCGGCCGCGGCCAAGAACCTGCTCTCCATCGCGTCGGACTCC ACCACAGCCGAGCCCATGCCCATCCGCCGGCTGGCGCTCATGGTGATCTGCAACCTGGCC AAGTGCGCGGAAGGCCGGGCCGCGCTGATGGACACGGGCGCCGTGGCGACGGTCTCCGCC ATCCTCTCCGACGACACCCACCGCTCCGAGCTGGAGGAGCTCTGCGTCGTGGCATTGTTC GGCATGAGCAGGGGGAACCCGCGGTTCCGGGGGCTCGCCAGAGCGGCCGGCGCGGACCGA CCCCTCATCCTCATCTCCGAGCGAGCGCCCGCCGGCGCGCACAAGGAGATGGCGCGGAAG GCGCTGCGCGTCGTGCTCGGCCTGGGCGACGACAGCGAGCGCGACCTGCCGGACTTCATG AACAGTGCACGCAACGTCAACGGCATCGCCGGTTCATCCGTGCCGGTCCATCGCCGGCGC GCCGCGAGCTGGGCGGCGGCTCCTCCTGCCCAGACACCACCGAATGCCCATCAATGGCGA TCAGTATGCATCGATTGA