Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0421800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:20186987:20192334:-1 gene:Os08g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.1.-) (Arabidospsis NPK1-related protein kinase 1). Splice isoform 1S. (Os08t0421800-01)
Sequence	ATGCGGCGGGACGACGCCGCTGGCGGAGGCGGCGGGGGGTTCCAGGAGCTGTTCGACTCG GTGCGCCGCTCCATCTCCTTCCGCCCCGGGGGCAGCGCCGCCGCCGCGGCCGCCGCCCTC GACGAGCCCGCCTCGGCTTCCGGCGGTGGGGGGTTCAGGGGGCGGATCAGCACGTGCCTC CGCAAGTCCAGGGGGATGGGGCTGCTCGGGATGGTGGCCTCCAAGAGCCCCTCACCCCCG CGCCGCCGCCTCCTTCCCCCGCCGCGTTCGCCGCCGCCCGCGCCAACGAAGTCTCTCTCG CCACAGCCTGCGGTGGTGTCCCAAGGGGGAGGCGGTGCGGGTGGAGTCGGAGGAGGGGAG GAGGAGGAGGCGAACCCGCCGATCCGGTGGCGGAAGGGCGATCTCCTCGGGAGCGGCGCG TTCGGGTCGGTGTTCCTCGGCATGGATCTTGATTCCGGCGAGCTCCTCGCCGTAAAGCAG GTTTTGATCGGGAGCAGCAACGCAACGAGGGAGAAGGCCCAGGGGCACATAAGGGAGCTT GAGGACGAAGTGAAGCTACTCAAGAACCTCTCACACCCCAACATTGTTCGATATATTGGA ACGGTGCGGGAGGAGAACTCGTTAAATATTCTGCTGGAGTTTGTGCCAGGAGGATCGATC CAGTCACTCCTCGGGAGGCTCGGATCATTCCCTGAGGCTGTCATCAGGAAATACACGAAA CAGATTTTGCATGGCCTGGAGTATTTACATCGCAATGGAATCATACACAGGGACATAAAG GGAGCAAATATACTTGTTGATAATAAAGGATGCATTAAGTTAGCAGACTTTGGGGCCTCC AAGCAAGTGGAGAAGTTGGCGACCACTGCCAAGACAATGAAAGGGACACCATATTGGATG GCCCCAGAAGTAATTGTTGGGAGTGGGCATGACTTTTCAGCTGATATCTGGAGTGTCGGA TGCACTGTAATTGAAATGGCAACTGGTAAAACTCCATGGAATCAGGAAATTCAAGAGGTT TCTCTTCTGTATTATGTTGGGACAACAAAGTCACACCCACCGATACCAGAGCATCTTTCC CCAGAAGCCAAGGATTTTCTGTTGAAATGCTTACAGAAGGAACCAGAACTGAGATCTACT GCATCAGACTTATTGCTGCACCCATTTGTTACAGGAGGATTGGAAGATCTTCACCAGGTT AATCATGCAACACACAAGGAAACCTCTGAGCTTCCGGCATACGATATGCCAACTGGTGAC CTGGGCTTGAATCATTCTGGCAACCCAAGTAACTTGAATTCCTATAAGTCATCAGACATG AGACCAATATGGGATGGGCACAGCAGTGATGACATGTGTCAGTTTGCTGAAAATGACGTG GTAATGGTTGGATCGAGCTTCAACCCTATGTCTGAACCATTTGATGACTGGGAAAGCCCA GAACAAAGATCTAGTCAATCAAGGGAATTTGGAGGATTAGCCAAACATGTTGAAAATAAC ATGTCTGAAAATGATTTTACTTTCCCATGTGAGGGAGGCTGTGAAGAGGATGATGAACTC ACAGAATCAAAAATAAAGGAATTTCTGGATGAAAAGGCCATAGATCTAAAGAAACTACAG ACACCTTTGTATGAGTTCTACAACACAGTAAATGCTGGACTTTCTCAAGGAGTTGGTGAA ACTTGCCAAGTAGACAACATTACTGATTTGCAATTGCCCCTTCAAGGAAGATCACCTCCA ATTCAGATGGAGGGAGTTGCAGCAGTAGGACCAACCAGCGATATTCTGAAGAGTGCCAGT CCAAAGAGCTGCACTAGGCGTTTCTCAAGAAGCGGTGTGGAGAATGGTCGAATTTTAAGA GAAATTGCTTCGCCTCAACTCAATAAGTTTGAGGACAAGGTCCACGATATTCAAGACAAT CCCAGCATTAGCTTTTCTGAAAGACAGAAGAAGTGGAAAGAAGAGTTAGACCAAGAACTT GAGATCGGGAGAGTGATGAGGTTGGGTAGCTTCGGTAAAGCGCCATCACCAAAGAGCCGA GGCATGACCAGGAAACGGGATCGCGTCTACTGA

Peptide Sequence

PEP ID	Os08t0421800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:20186987:20192334:-1 gene:Os08g0421800 transcript:Os08t0421800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.1.-) (Arabidospsis NPK1-related protein kinase 1). Splice isoform 1S. (Os08t0421800-01)
Sequence	MRRDDAAGGGGGGFQELFDSVRRSISFRPGGSAAAAAAALDEPASASGGGGFRGRISTCL RKSRGMGLLGMVASKSPSPPRRRLLPPPRSPPPAPTKSLSPQPAVVSQGGGGAGGVGGGE EEEANPPIRWRKGDLLGSGAFGSVFLGMDLDSGELLAVKQVLIGSSNATREKAQGHIREL EDEVKLLKNLSHPNIVRYIGTVREENSLNILLEFVPGGSIQSLLGRLGSFPEAVIRKYTK QILHGLEYLHRNGIIHRDIKGANILVDNKGCIKLADFGASKQVEKLATTAKTMKGTPYWM APEVIVGSGHDFSADIWSVGCTVIEMATGKTPWNQEIQEVSLLYYVGTTKSHPPIPEHLS PEAKDFLLKCLQKEPELRSTASDLLLHPFVTGGLEDLHQVNHATHKETSELPAYDMPTGD LGLNHSGNPSNLNSYKSSDMRPIWDGHSSDDMCQFAENDVVMVGSSFNPMSEPFDDWESP EQRSSQSREFGGLAKHVENNMSENDFTFPCEGGCEEDDELTESKIKEFLDEKAIDLKKLQ TPLYEFYNTVNAGLSQGVGETCQVDNITDLQLPLQGRSPPIQMEGVAAVGPTSDILKSAS PKSCTRRFSRSGVENGRILREIASPQLNKFEDKVHDIQDNPSISFSERQKKWKEELDQEL EIGRVMRLGSFGKAPSPKSRGMTRKRDRVY

Transcript Sequence

Transcript ID	Os08t0421800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:20186987:20192334:-1 gene:Os08g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.1.-) (Arabidospsis NPK1-related protein kinase 1). Splice isoform 1S. (Os08t0421800-01)
Sequence	CGCATCCAAACCCTCGCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGACGACGACCATCCC ACCGACCGCGCGCGCGCGAGGGGGCTCTACTACCACCGGCGATGCGGCGGGACGACGCCG CTGGCGGAGGCGGCGGGGGGTTCCAGGAGCTGTTCGACTCGGTGCGCCGCTCCATCTCCT TCCGCCCCGGGGGCAGCGCCGCCGCCGCGGCCGCCGCCCTCGACGAGCCCGCCTCGGCTT CCGGCGGTGGGGGGTTCAGGGGGCGGATCAGCACGTGCCTCCGCAAGTCCAGGGGGATGG GGCTGCTCGGGATGGTGGCCTCCAAGAGCCCCTCACCCCCGCGCCGCCGCCTCCTTCCCC CGCCGCGTTCGCCGCCGCCCGCGCCAACGAAGTCTCTCTCGCCACAGCCTGCGGTGGTGT CCCAAGGGGGAGGCGGTGCGGGTGGAGTCGGAGGAGGGGAGGAGGAGGAGGCGAACCCGC CGATCCGGTGGCGGAAGGGCGATCTCCTCGGGAGCGGCGCGTTCGGGTCGGTGTTCCTCG GCATGGATCTTGATTCCGGCGAGCTCCTCGCCGTAAAGCAGGTTTTGATCGGGAGCAGCA ACGCAACGAGGGAGAAGGCCCAGGGGCACATAAGGGAGCTTGAGGACGAAGTGAAGCTAC TCAAGAACCTCTCACACCCCAACATTGTTCGATATATTGGAACGGTGCGGGAGGAGAACT CGTTAAATATTCTGCTGGAGTTTGTGCCAGGAGGATCGATCCAGTCACTCCTCGGGAGGC TCGGATCATTCCCTGAGGCTGTCATCAGGAAATACACGAAACAGATTTTGCATGGCCTGG AGTATTTACATCGCAATGGAATCATACACAGGGACATAAAGGGAGCAAATATACTTGTTG ATAATAAAGGATGCATTAAGTTAGCAGACTTTGGGGCCTCCAAGCAAGTGGAGAAGTTGG CGACCACTGCCAAGACAATGAAAGGGACACCATATTGGATGGCCCCAGAAGTAATTGTTG GGAGTGGGCATGACTTTTCAGCTGATATCTGGAGTGTCGGATGCACTGTAATTGAAATGG CAACTGGTAAAACTCCATGGAATCAGGAAATTCAAGAGGTTTCTCTTCTGTATTATGTTG GGACAACAAAGTCACACCCACCGATACCAGAGCATCTTTCCCCAGAAGCCAAGGATTTTC TGTTGAAATGCTTACAGAAGGAACCAGAACTGAGATCTACTGCATCAGACTTATTGCTGC ACCCATTTGTTACAGGAGGATTGGAAGATCTTCACCAGGTTAATCATGCAACACACAAGG AAACCTCTGAGCTTCCGGCATACGATATGCCAACTGGTGACCTGGGCTTGAATCATTCTG GCAACCCAAGTAACTTGAATTCCTATAAGTCATCAGACATGAGACCAATATGGGATGGGC ACAGCAGTGATGACATGTGTCAGTTTGCTGAAAATGACGTGGTAATGGTTGGATCGAGCT TCAACCCTATGTCTGAACCATTTGATGACTGGGAAAGCCCAGAACAAAGATCTAGTCAAT CAAGGGAATTTGGAGGATTAGCCAAACATGTTGAAAATAACATGTCTGAAAATGATTTTA CTTTCCCATGTGAGGGAGGCTGTGAAGAGGATGATGAACTCACAGAATCAAAAATAAAGG AATTTCTGGATGAAAAGGCCATAGATCTAAAGAAACTACAGACACCTTTGTATGAGTTCT ACAACACAGTAAATGCTGGACTTTCTCAAGGAGTTGGTGAAACTTGCCAAGTAGACAACA TTACTGATTTGCAATTGCCCCTTCAAGGAAGATCACCTCCAATTCAGATGGAGGGAGTTG CAGCAGTAGGACCAACCAGCGATATTCTGAAGAGTGCCAGTCCAAAGAGCTGCACTAGGC GTTTCTCAAGAAGCGGTGTGGAGAATGGTCGAATTTTAAGAGAAATTGCTTCGCCTCAAC TCAATAAGTTTGAGGACAAGGTCCACGATATTCAAGACAATCCCAGCATTAGCTTTTCTG AAAGACAGAAGAAGTGGAAAGAAGAGTTAGACCAAGAACTTGAGATCGGGAGAGTGATGA GGTTGGGTAGCTTCGGTAAAGCGCCATCACCAAAGAGCCGAGGCATGACCAGGAAACGGG ATCGCGTCTACTGAATGGAAACGAGAATTGTCATCTGGCAGGACTAATGGTGACTTGACT ACAACTGTACAATGTCAGCGATTGGTGGCCATACCAGTACAGTGCACTGCCTCGCCACTC GTGTGACCTAACAAAAATTTTCATAGCTGCCAAATCCTTTTGGTGCTCATTTGAGTTTGA TATGAAGGCTATTCCAGGTGGGCATTTGGATTTGAAGCCAGGCTGTCACGATTTGCCCAC AGGGGAACAGTTTACTGGCTGTTTCGCCTACAATATGCAGCTTTATGTTAACGATGCCTT GGCGATTTTGGGAGCCCTCCAAGTGTGGCAGGATGGCTTATGCGCAGAAGGAATAGTTGT ACTTTTATTTTTTTTCCCTTTCTCTTCGTTGTTTTTGTAAGAAAGATACTCCAAGAGCTT GCCGTTTGCGAGCATGTAATAAGCAATGTAATGCTGAGTGTGTTATCATCGAGAATGTAG TATGCGTTTTGC