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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0416800-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:19928662:19929233:1 gene:Os08g0416800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0416800-01)
Sequence

TCCATCTTGTCTCTGAATTTAACTAAATTGTCTTCAGCTCCGTGCAGCTGCTCGTCCTGC
TCAGCTCAGGAGATGGTGGTGATGGGGCAGCTGGGGAGGTTCATGGACGGGATCAAGTCG
AAGCTTCGCGGCGGCGGAGGGAGGAAGACAGGGAGGAAGAAGGAGGCGGCGGCGATGATG
ACGTACGACAAGATGGACAAGACGGAGAGCATGAGGGTGGAGATCAGGAGCAGGCAGGCG
CAGAAGCTCATCGCCAAGAACCTCGTCGCCGCCGACTCCATCGGCCGCCGCAACAAGCGC
TTCTTCCTCGCCTTCTGA

Peptide Sequence

PEP ID

Os08t0416800-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:19928662:19929233:1 gene:Os08g0416800 transcript:Os08t0416800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0416800-01)
Sequence

SILSLNLTKLSSAPCSCSSCSAQEMVVMGQLGRFMDGIKSKLRGGGGRKTGRKKEAAAMM
TYDKMDKTESMRVEIRSRQAQKLIAKNLVAADSIGRRNKRFFLAF

Transcript Sequence

Transcript ID

Os08t0416800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:19928662:19929233:1 gene:Os08g0416800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0416800-01)
Sequence

ACTCCATCTTGTCTCTGAATTTAACTAAATTGTCTTCAGCTCCGTGCAGCTGCTCGTCCT
GCTCAGCTCAGGAGATGGTGGTGATGGGGCAGCTGGGGAGGTTCATGGACGGGATCAAGT
CGAAGCTTCGCGGCGGCGGAGGGAGGAAGACAGGGAGGAAGAAGGAGGCGGCGGCGATGA
TGACGTACGACAAGATGGACAAGACGGAGAGCATGAGGGTGGAGATCAGGAGCAGGCAGG
CGCAGAAGCTCATCGCCAAGAACCTCGTCGCCGCCGACTCCATCGGCCGCCGCAACAAGC
GCTTCTTCCTCGCCTTCTGATTTCTGATTCATCAGTTCATCACCATCGAGAATCCAATTA
AGCAAACAAAATATATATTTATGTTGTTATATTGATCATCGCCAACATCGAAACATTCAA
GCGACAGTATTTACTATGTTGTTATAGATGCGGAGAATCCCATCAAAACAGTTACTG