Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0416100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:19898592:19907743:-1 gene:Os08g0416100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase, RNA helicase 29 description:DEAD-like helicase, N-terminal domain containing protein. (Os08t0416100-01)
Sequence	ATGGCGCGCCTCAACCCCTCCAAACCCAGCTCCCGCGGAGGCAAGCCGAGGTCCTCCTCC GCGGACGCCATGGCGGAGCACAAGCCGCTGCCGGGGCGGCCGAAGCGGGAGGGGGAAGGG GCGAGCAAGAGGAAGGCCAAGTCGGGCGGGTTCGAGTCGATGGGGCTGTGCGAGGAGGTG TACCGCGGGGTGCGCCACAAGGGGTACCGCGTGCCCACCCCCATCCAGCGGAAGGCCATG CCGCTCATCCTCGCCGGCCACGACATCGCCGCCATGGCGCGCACGGGCTCCGGGAAGACC GCCGCCTTCCTCGTGCCCATGATCCAGCGCCTCCGCCGCCACGACGCGGGCGCCGGCATC CGCGCGCTCATCCTCTCGCCGACCCGCGACCTCGCCACGCAGACGCTCAAGTTCGCGCAG CAGCTCGGGAAGTTCACTGATCTAAAGATTAGCCTGATTGTTGGTGGAGATAGCATGGAG AGTCAGTTTGAGGAATTGGCAGAAAATCCGGATATCATAATTGCAACACCTGGCAGACTC GTGCACCATCTGGCGGAGGTTGAGGACTTGAATCTTCGGACAGTGGAATATGTTGTGTTT GATGAGGCAGATTCCCTCTTTAGCTTGGGGTTAATCCAGCAGCTGCATGACATTCTACAT AAGCTGAGTGATACACGACAAACATTGCTCTTCAGCGCCACCTTGCCACAAGCCCTTGCA GATTTTGCAAAAGCTGGTCTACGTGACCCACAAATTGTAAGACTTGATTTGGACAAAAAG ATCAGTCCTGATCTTAAACTTGCCTTTTTCACGCTGCGTCAGGAGGAGAAATTAGCTGCT TTACTGTACTTGGTCAGGGAGCGAATCAGCTCTGAGGAACAGACAATAATATTTGTTTCA ACCAAGCATCATGTGGAGTTCCTAAATATTCTGTTCCGGGAGGAGGGCTTAGAACCTTCC CTTTCCTATGGTGCTATGGATCAAGAAGCCCGCAATATTCATATTTCAAAATTCAGGGCA AGGAAAACTATGATACTTATTGTGACAGATGTTGCTGCAAGGGGTCTGGATATTCCATTG CTTGATAATGTGGTGAACTGGGACTTCCCTGCAAAGCCTAAATTATTCGTTCATAGGGTT GGCAGAGTAGCTCGACAAGGTAGAAGTGGCACAGCATATACTTTTGTCACTTCGGAGGAC ATGGCATATTTATTGGACCTACATCTTTTCCTTTCAAAGCCTCTTAGACCTGCTCCAACA GAGGAGGAACTTCTGAAGGATATGGAGGGAATGAATTTAAAAATTGATCGTGCTCTTGCA AATGGAGAAACTGTGTATGGGCGTTTTCCTCAGACAATCATTGATCTTGTATCTGATGGA ATAAAAGAAGTCATCAATGGATGTACAGATCTAATTGCATTGGAAAAGCCATGCACTAAT GCTTTCCATTTGTATCTGAAGACTCGTCCAATGCCTTCAACAGAATCAATCAGAAGGGTA AAAGATTTGCCTCGTGAAGGTCTTCATCCAATTTTCAGGGACGTACTTGGGTCAGATGAG CTTTCAGCTCTTGCATTCTCGGAACGCTTGAAATCATTTCGGCCGAAGCAGACGATTTTA GAGGCTGAAGGTGAAGCTGCTAGGGGTTCAAATCAATGGCTAGATGTGATGAAGAAGAAA AGAGAAGTGCATGAGGGAATTATAAATTTAGTACATCAAAAGAATAATGTTGATCATGAG CCAAAGGAAGAATTGGTAGAGAATATTTCAAACTGGGAGAGAAAAGATGTTTGTGGTAAT AAGCGGAAGTTACAGAGCTTTAGAGATGAGGAATACTACATAAGTTCAGTGCCTCAAAAC CAACATTTGGAAGCTGGACTGTCAGTGAGGGCCAACGAAGGATTTGTTGAAAATAGATTG GATGCTGCTGTTCTTGATCTAGTTGATGATGAAACTTCTGGTATGCAAGCACAGAAAACT CGATATCACTGGAAAAAGAACAAGTTTGTCAAGTTAAATAGTGGGGATCGTGTCACTGCC ACAGGAAAGATTAAGACAGAAAGTGGTGCGAAGTTAAAGCCAACAAAAACAGGGATATAC AAGAAATGGCAACAGAAGACACATAGATCTATCGATACTGGTAGAAAATTTGGTGGCTTT GCAGAAGAGGGTGCATCCACGACAGGTAGCCATCAAAGAGGAAACAGAAAACACACTGCA GTGGGACGGGGGCGTCGCTATATACCGAACGCCGACGTACCGTCTGAGATTAGAAATCCC GAACAAATACAGAAGAGCAGGCAGCAAAAAGCAATGGATATTGCCCGCATGAAGAACAGA TCCACAAAAGAGAGTAAATTCCAGAAATTCCAGAAGAACAACAGGAGGCACGATGGACCC TTGAAAGATGGCAAATTCCAGAAGAACAGGAGACCGGATGGCAATGGAAAGAACAGGAGA CCGGATGGCAATGGAAAGGGACGGGGGAAAGGCAAAGGAAATGCAAATGGATTTGGTAAA GGGAAGGGAAAAATGAAAGGGAAGGGCACAAGGTGA

Peptide Sequence

PEP ID	Os08t0416100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:19898592:19907743:-1 gene:Os08g0416100 transcript:Os08t0416100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase, RNA helicase 29 description:DEAD-like helicase, N-terminal domain containing protein. (Os08t0416100-01)
Sequence	MARLNPSKPSSRGGKPRSSSADAMAEHKPLPGRPKREGEGASKRKAKSGGFESMGLCEEV YRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGI RALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATPGRL VHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTLLFSATLPQALA DFAKAGLRDPQIVRLDLDKKISPDLKLAFFTLRQEEKLAALLYLVRERISSEEQTIIFVS TKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAARGLDIPL LDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLSKPLRPAPT EEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIKEVINGCTDLIALEKPCTN AFHLYLKTRPMPSTESIRRVKDLPREGLHPIFRDVLGSDELSALAFSERLKSFRPKQTIL EAEGEAARGSNQWLDVMKKKREVHEGIINLVHQKNNVDHEPKEELVENISNWERKDVCGN KRKLQSFRDEEYYISSVPQNQHLEAGLSVRANEGFVENRLDAAVLDLVDDETSGMQAQKT RYHWKKNKFVKLNSGDRVTATGKIKTESGAKLKPTKTGIYKKWQQKTHRSIDTGRKFGGF AEEGASTTGSHQRGNRKHTAVGRGRRYIPNADVPSEIRNPEQIQKSRQQKAMDIARMKNR STKESKFQKFQKNNRRHDGPLKDGKFQKNRRPDGNGKNRRPDGNGKGRGKGKGNANGFGK GKGKMKGKGTR

Transcript Sequence

Transcript ID	Os08t0416100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19898592:19907743:-1 gene:Os08g0416100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase, RNA helicase 29 description:DEAD-like helicase, N-terminal domain containing protein. (Os08t0416100-01)
Sequence	AGCCCAGCCCGCCAAACACGCACCGTCTCGCAGCCTCGCAGGTTAACCCTGCTGCCTACT CCGCCGCCTCCTCCTCCCCCCGCCTCGCCTCGCCGCCGCGGCCGAGACCTCAAAGCCCTA AACCCACCCACCCACCCCATCTCTCCCTCTCTCCTCCCTCCCATGGCGCGCCTCAACCCC TCCAAACCCAGCTCCCGCGGAGGCAAGCCGAGGTCCTCCTCCGCGGACGCCATGGCGGAG CACAAGCCGCTGCCGGGGCGGCCGAAGCGGGAGGGGGAAGGGGCGAGCAAGAGGAAGGCC AAGTCGGGCGGGTTCGAGTCGATGGGGCTGTGCGAGGAGGTGTACCGCGGGGTGCGCCAC AAGGGGTACCGCGTGCCCACCCCCATCCAGCGGAAGGCCATGCCGCTCATCCTCGCCGGC CACGACATCGCCGCCATGGCGCGCACGGGCTCCGGGAAGACCGCCGCCTTCCTCGTGCCC ATGATCCAGCGCCTCCGCCGCCACGACGCGGGCGCCGGCATCCGCGCGCTCATCCTCTCG CCGACCCGCGACCTCGCCACGCAGACGCTCAAGTTCGCGCAGCAGCTCGGGAAGTTCACT GATCTAAAGATTAGCCTGATTGTTGGTGGAGATAGCATGGAGAGTCAGTTTGAGGAATTG GCAGAAAATCCGGATATCATAATTGCAACACCTGGCAGACTCGTGCACCATCTGGCGGAG GTTGAGGACTTGAATCTTCGGACAGTGGAATATGTTGTGTTTGATGAGGCAGATTCCCTC TTTAGCTTGGGGTTAATCCAGCAGCTGCATGACATTCTACATAAGCTGAGTGATACACGA CAAACATTGCTCTTCAGCGCCACCTTGCCACAAGCCCTTGCAGATTTTGCAAAAGCTGGT CTACGTGACCCACAAATTGTAAGACTTGATTTGGACAAAAAGATCAGTCCTGATCTTAAA CTTGCCTTTTTCACGCTGCGTCAGGAGGAGAAATTAGCTGCTTTACTGTACTTGGTCAGG GAGCGAATCAGCTCTGAGGAACAGACAATAATATTTGTTTCAACCAAGCATCATGTGGAG TTCCTAAATATTCTGTTCCGGGAGGAGGGCTTAGAACCTTCCCTTTCCTATGGTGCTATG GATCAAGAAGCCCGCAATATTCATATTTCAAAATTCAGGGCAAGGAAAACTATGATACTT ATTGTGACAGATGTTGCTGCAAGGGGTCTGGATATTCCATTGCTTGATAATGTGGTGAAC TGGGACTTCCCTGCAAAGCCTAAATTATTCGTTCATAGGGTTGGCAGAGTAGCTCGACAA GGTAGAAGTGGCACAGCATATACTTTTGTCACTTCGGAGGACATGGCATATTTATTGGAC CTACATCTTTTCCTTTCAAAGCCTCTTAGACCTGCTCCAACAGAGGAGGAACTTCTGAAG GATATGGAGGGAATGAATTTAAAAATTGATCGTGCTCTTGCAAATGGAGAAACTGTGTAT GGGCGTTTTCCTCAGACAATCATTGATCTTGTATCTGATGGAATAAAAGAAGTCATCAAT GGATGTACAGATCTAATTGCATTGGAAAAGCCATGCACTAATGCTTTCCATTTGTATCTG AAGACTCGTCCAATGCCTTCAACAGAATCAATCAGAAGGGTAAAAGATTTGCCTCGTGAA GGTCTTCATCCAATTTTCAGGGACGTACTTGGGTCAGATGAGCTTTCAGCTCTTGCATTC TCGGAACGCTTGAAATCATTTCGGCCGAAGCAGACGATTTTAGAGGCTGAAGGTGAAGCT GCTAGGGGTTCAAATCAATGGCTAGATGTGATGAAGAAGAAAAGAGAAGTGCATGAGGGA ATTATAAATTTAGTACATCAAAAGAATAATGTTGATCATGAGCCAAAGGAAGAATTGGTA GAGAATATTTCAAACTGGGAGAGAAAAGATGTTTGTGGTAATAAGCGGAAGTTACAGAGC TTTAGAGATGAGGAATACTACATAAGTTCAGTGCCTCAAAACCAACATTTGGAAGCTGGA CTGTCAGTGAGGGCCAACGAAGGATTTGTTGAAAATAGATTGGATGCTGCTGTTCTTGAT CTAGTTGATGATGAAACTTCTGGTATGCAAGCACAGAAAACTCGATATCACTGGAAAAAG AACAAGTTTGTCAAGTTAAATAGTGGGGATCGTGTCACTGCCACAGGAAAGATTAAGACA GAAAGTGGTGCGAAGTTAAAGCCAACAAAAACAGGGATATACAAGAAATGGCAACAGAAG ACACATAGATCTATCGATACTGGTAGAAAATTTGGTGGCTTTGCAGAAGAGGGTGCATCC ACGACAGGTAGCCATCAAAGAGGAAACAGAAAACACACTGCAGTGGGACGGGGGCGTCGC TATATACCGAACGCCGACGTACCGTCTGAGATTAGAAATCCCGAACAAATACAGAAGAGC AGGCAGCAAAAAGCAATGGATATTGCCCGCATGAAGAACAGATCCACAAAAGAGAGTAAA TTCCAGAAATTCCAGAAGAACAACAGGAGGCACGATGGACCCTTGAAAGATGGCAAATTC CAGAAGAACAGGAGACCGGATGGCAATGGAAAGAACAGGAGACCGGATGGCAATGGAAAG GGACGGGGGAAAGGCAAAGGAAATGCAAATGGATTTGGTAAAGGGAAGGGAAAAATGAAA GGGAAGGGCACAAGGTGATTTGACGAAGAAAATGTTATCCAAAGCACAGGAGAGGGGCTG CTGCGCTATCAACAGCAGGTGCTGTTTGCCTTCTCGTGTATTCCAGTTTTGTTTGCTTTC CTAATCGTTCCTCTAATTGTAATTCAAAGCATCCGAGATCTTACCGAGAATATACTCGTT CGCGTTACTAATTTAAACATTGGATAGTTTTGTC