Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0416000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:19884020:19888355:-1 gene:Os08g0416000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 5 description:Homeodomain leucine zipper protein. (Os08t0416000-01);Similar to Homeobox-leucine zipper protein HOX5. (Os08t0416000-02)
Sequence	ATGGATCCCGGCCGCGTCGTGTTCGACTCCGGCGTGGCGCGGCGGGCGTGCCCCGGCGGC GCGCAGATGCTTCTCTTCGGCGGCGGCGGCAGCGCCAACAGCGGCGGCTTCTTCCGAGGC GTGCCGGCGGCGGTGCTGGGGATGGATGAATCGCGGTCGTCGTCGTCGGCGGCGGGGGCG GGGGCGAAGCGGCCGTTCTTCACGACGCACGAGGAGCTCCTGGAGGAGGAGTACTACGAC GAGCAGGCGCCGGAGAAGAAGCGGCGGCTGACGGCGGAGCAGGTGCAGATGCTGGAGCGG AGCTTCGAGGAGGAGAACAAGCTGGAGCCGGAGCGGAAGACGGAGCTCGCCCGCCGCCTC GGCATGGCCCCCCGGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCTGGAAGACC AAGCAGCTCGAGCACGACTTCGACCGCCTCAAGGCCGCCTACGACGCCCTCGCCGCCGAC CACCATGCCCTCCTCTCCGACAACGACCGCCTCCGCGCGCAGGTAATCTCATTAACCGAG AAGCTGCAAGACAAGGAGACGTCGCCGTCGTCGGCGACCATCACCACCGCGGCGCAGGAG GTCGACCAGCCGGACGAACACACGGAGGCCGCGTCAACCACCGGCTTCGCCACCGTCGAC GGCGCATTGGCGGCGCCACCGCCCGGCCACCAGCAGCCGCCGCATAAAGATGATCTTGTG AGCAGCGGCGGCACCAACGACGACGGCGATGGCGGCGCGGCCGTGGTGGTCTTCGACGTC ACCGAGGGCGCCAACGACCGCCTCAGCTGCGAGTCGGCGTACTTCGCCGACGCCGCGGAG GCGTACGAGCGCGACTGCGCCGGGCACTACGCCCTCTCGTCGGAGGAGGAGGACGGCGGC GCGGTCAGCGACGAGGGCTGCAGCTTCGACCTCCCCGACGCCGCCGCCGCCGCCGCCGCC ATGTTCGGCGCCGCCGGAGTTGTGCACCACGACGCCGCGGACGACGAGGAGGCGCAGCTC GGCAGCTGGACCGCCTGGTTCTGGAGCTGA

Peptide Sequence

PEP ID	Os08t0416000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:19884020:19888355:-1 gene:Os08g0416000 transcript:Os08t0416000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 5 description:Homeodomain leucine zipper protein. (Os08t0416000-01);Similar to Homeobox-leucine zipper protein HOX5. (Os08t0416000-02)
Sequence	MDPGRVVFDSGVARRACPGGAQMLLFGGGGSANSGGFFRGVPAAVLGMDESRSSSSAAGA GAKRPFFTTHEELLEEEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRL GMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTE KLQDKETSPSSATITTAAQEVDQPDEHTEAASTTGFATVDGALAAPPPGHQQPPHKDDLV SSGGTNDDGDGGAAVVVFDVTEGANDRLSCESAYFADAAEAYERDCAGHYALSSEEEDGG AVSDEGCSFDLPDAAAAAAAMFGAAGVVHHDAADDEEAQLGSWTAWFWS

Transcript Sequence

Transcript ID	Os08t0416000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19884020:19888355:-1 gene:Os08g0416000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 5 description:Homeodomain leucine zipper protein. (Os08t0416000-01);Similar to Homeobox-leucine zipper protein HOX5. (Os08t0416000-02)
Sequence	AGCAACAAAATTCAGAAGTCAAAAAAATCCCAAAAACAAAAAATAATAAAAAAAAAGAAA GAGAGAGACATTTCGCATCTGCTGCCCTGCCTCCTCTCCCATCACCTGCCCATTTTTTCA CATTGAGGCCCCTCTGAAAATATTATATTTACAACTAGGTCCCTGGCCGGGCCGGCCGGC CACCGGAAGGAGCACCTCGCCGGAGAAGGCTTTGTCTCTTCTTTTTCTTCTCCTCCTCCT CCTCCATCGGCGGCGGCATGGGGTTCTCGCTGTACCCCATGAAGACGTCGACGCGCATGC TGTGGAGCACCAGCTTCTTCCGCCATAAGGTCGCCTCCTCCTTCTAAGCCCACGCCCTCT CGGGCGGCGGCGGCGAGCCGGCGGCGGAGCGCGCGGTTGGTAGGTGCGCGTGCGTGCGTG AACGGGAGAGCAGCTTCGAGATCGGGTTTTCTTGGGTTCTTGGAGAAGGGAGGAGAAGAG GGGGAGGAGAGCATGGATCCCGGCCGCGTCGTGTTCGACTCCGGCGTGGCGCGGCGGGCG TGCCCCGGCGGCGCGCAGATGCTTCTCTTCGGCGGCGGCGGCAGCGCCAACAGCGGCGGC TTCTTCCGAGGCGTGCCGGCGGCGGTGCTGGGGATGGATGAATCGCGGTCGTCGTCGTCG GCGGCGGGGGCGGGGGCGAAGCGGCCGTTCTTCACGACGCACGAGGAGCTCCTGGAGGAG GAGTACTACGACGAGCAGGCGCCGGAGAAGAAGCGGCGGCTGACGGCGGAGCAGGTGCAG ATGCTGGAGCGGAGCTTCGAGGAGGAGAACAAGCTGGAGCCGGAGCGGAAGACGGAGCTC GCCCGCCGCCTCGGCATGGCCCCCCGGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCC CGCTGGAAGACCAAGCAGCTCGAGCACGACTTCGACCGCCTCAAGGCCGCCTACGACGCC CTCGCCGCCGACCACCATGCCCTCCTCTCCGACAACGACCGCCTCCGCGCGCAGGTAATC TCATTAACCGAGAAGCTGCAAGACAAGGAGACGTCGCCGTCGTCGGCGACCATCACCACC GCGGCGCAGGAGGTCGACCAGCCGGACGAACACACGGAGGCCGCGTCAACCACCGGCTTC GCCACCGTCGACGGCGCATTGGCGGCGCCACCGCCCGGCCACCAGCAGCCGCCGCATAAA GATGATCTTGTGAGCAGCGGCGGCACCAACGACGACGGCGATGGCGGCGCGGCCGTGGTG GTCTTCGACGTCACCGAGGGCGCCAACGACCGCCTCAGCTGCGAGTCGGCGTACTTCGCC GACGCCGCGGAGGCGTACGAGCGCGACTGCGCCGGGCACTACGCCCTCTCGTCGGAGGAG GAGGACGGCGGCGCGGTCAGCGACGAGGGCTGCAGCTTCGACCTCCCCGACGCCGCCGCC GCCGCCGCCGCCATGTTCGGCGCCGCCGGAGTTGTGCACCACGACGCCGCGGACGACGAG GAGGCGCAGCTCGGCAGCTGGACCGCCTGGTTCTGGAGCTGATCGATGGAAGCATGGAGC ATTGGAGCCATGCTATCAATGAATGAATGAATCAAATGACCTTGAGACCCTCCTCTCCGT CCTTTCTTTTGCCCTATTTTTAATCGCTGTTATATGTTAATTATGTGCAATTAAAGTGTA CGTGTTTTGTCGTAAGTTGTGTTTGTTCAAATTGTATGTTTTGAAGGTGTCATGTATTCA TACACGATATGATATATAGACGGGATCATGAATGATACTCGGAAAGATTGGAATAATTCC ATGTAGTGTTGAGCAATAATAAACATTTTCCTCCGATAAGATGTTTTTATGATT