Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0415600-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:19875348:19881382:1 gene:Os08g0415600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 5, U-box protein 5 description:Similar to ubiquitin-protein ligase. (Os08t0415600-00)
Sequence	ATGACGCCGCCGCCGCCGCCGCCGCGCCGCCGGATGCTGGCGATGCCGGCGGTGTGCCCA TGCGAGGACATCTCGCCCGGGACGCTGCTGGCGTCGCTCGCCACGCTTTCGGCCGACGTC GCCGACGGGTGCGACGTGGACAGGCTGCCGGCGCTCCGGGGCGGCGTCGGCGTGGCCGTG CGCGTCGCCGGGTTGCTCCGGGAGTTCCTTGAGGAGGTCCGGTGGGCGGCGGCGGCGGAG CTCCCCGGTGGCTCTGTGCTGGGGATGTCCGAGCTGCACGTGGCGTTGCAGAAGATGCGG TTCTTGCTAGAGGATTGCGGGAGGAAGGGGGCGCGGATGTGGGTGCTGATGAACGCGGAG GCTGTGGCGTCGGAGCTGCGGGTGGTGCTCGGCTCGGTGGCGACGGCGATGGACGTGCTC CCCGCCGGCGTGGTCGCGGCGTCCGACGACGCCAGGGAGTTCGCGGCGCTGGTGTCGCAG CAGGCGTGGCGCGCCGCGGTGCGGCCGGACGAGGAGGACTCCCGCGCGGCACGGAGCGTG CGGTCGATGCTGGCGCGGTTCAGGAGCGGCGCCACGCCGGACGCCGAGGACGCGAGGCTG GTGCTCGGCCGCGTCGGCGTCGCCAGCTGGTGGGACTGCTCCCAGGAGGTGTCCTTCCTC GAGGCCGAGATGCTCGAGCGGCTGGAGGCCGGCGGCGAGAACGACAACGACCTCGTGCTC ATCAGCGGCCTCTTGACGTTCCTGCTCTACTGCCGCGTCGTCCTGTTCGACCGCATTGAT TACGGCAAGGCTGATGAGCCGGCGCCGGCGCCGGCGCCGAGGGCGGCGAGCTACTTGGCG CGAATCAATCCGGAGGGGCTGCAATGCCCGATCACGCTGGAGCTGATGACTGATCCGGTG ACATTGGCCACCGGCCAGACCTACGACCGCGCGTCGATCAAGCGGTGGGTGAAGAGCGGG TGCCGGACGTGCCCCGTCACCGGCGAGAAGCTCCGTAGCGCCGACGTCGTGCCGAACGTC GCGGTGCGCGGGATCGTCGAGCAGCTGCTGCTCAGCAGCGGCGTCTCGCTCCACGAGCCG AGCAGCAAGCACCGGTGCGCGGTCGACAAGACGGCCTCGCCGTTCGGTGCCGCGGCGGCC GGCGGCGCGCGCCTCGCCGTGGCGTTCCTCGTGTCCAAGCTGTGCCGTGGCACGCCGGAG GAGCAGAAGAAGGCGACGTACGAGTGCCGGAAGCTGTCGAAGCGGAACGTGTTCCACCGG GCGTGCCTCGTCGACGCCGGCGCCGTGCCATGGCTGCTCCACCTCCTCTCCTCCCCGGAC GCCTCCGTCCAGGACAATGCCGTGGCTGGCCTCCTCAACCTCTCCAAGCACCCCGCCGGC AGGAGGGCGCTCGTCGAGGCCGGCGGGCTGGGCCTCATCGTCGACGCCGTGAGCGTGGCC GCCAAGGTGGAGGCGCAGCAGAACGCGGCGGCCATCCTGTTCTACCTCTCGTCGGACGCC GGCTACTGCGATGAGATCAGCCGCATCCCGGAGGCGATCCCGACGCTGGTCCGGCTCGTG CGGGAGGGCGCGTACCGCGGCCGGAAGAACGCGCTGGTGAGCCTCTACGGCGTGCTCCAG CGCGGCGCGGGCGGCCACGGCAGGGCGGTGTCCGCCGGCGCCGTGGCGGCGCTCGCGTCC CTGCTGCCCGGCGACCGCGACGACCTCGCCAACGACGCCGTCGCGCTGCTGGCGAGGCTC GCCGAGCAGCCCGCCGGCGCGGCGGCCGTCCTCTCCAGCTCGGCGCTCGTCACGCGGCTC GTCGACTTCCTCGGCGCGTCGGCGTCGCGGTCGGCCAAGGACCACTGCGCGGCGCTGCTG GCGTCGCTGTGCCGGCACGGCGGCGACGCGCACGGCTTGCGGGCGGAGCAGCGGCAGCGC GGAGCGGCGCCAGGATGCGGGCAGAGCGATGATGGTCGGCGGCGGGCGAGCGGAAGGCAA GAGCAGCGGGCTGCGGGTAGAGCGGACAGCGGGCGAGCCCGGCGGGCGGAGGAGGGGGCC GCAATGGCGGAGGTGGCCGAAGGAGGAGCGTGGCAGCGGTGGGCGAGCTCCGCCGGCCTA CTCAGCCCACCACGTTGCCGAAGAAAGAGAGGAGCATGGCGACGACGGTGGTGA

Peptide Sequence

PEP ID	Os08t0415600-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:19875348:19881382:1 gene:Os08g0415600 transcript:Os08t0415600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 5, U-box protein 5 description:Similar to ubiquitin-protein ligase. (Os08t0415600-00)
Sequence	MTPPPPPPRRRMLAMPAVCPCEDISPGTLLASLATLSADVADGCDVDRLPALRGGVGVAV RVAGLLREFLEEVRWAAAAELPGGSVLGMSELHVALQKMRFLLEDCGRKGARMWVLMNAE AVASELRVVLGSVATAMDVLPAGVVAASDDAREFAALVSQQAWRAAVRPDEEDSRAARSV RSMLARFRSGATPDAEDARLVLGRVGVASWWDCSQEVSFLEAEMLERLEAGGENDNDLVL ISGLLTFLLYCRVVLFDRIDYGKADEPAPAPAPRAASYLARINPEGLQCPITLELMTDPV TLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSADVVPNVAVRGIVEQLLLSSGVSLHEP SSKHRCAVDKTASPFGAAAAGGARLAVAFLVSKLCRGTPEEQKKATYECRKLSKRNVFHR ACLVDAGAVPWLLHLLSSPDASVQDNAVAGLLNLSKHPAGRRALVEAGGLGLIVDAVSVA AKVEAQQNAAAILFYLSSDAGYCDEISRIPEAIPTLVRLVREGAYRGRKNALVSLYGVLQ RGAGGHGRAVSAGAVAALASLLPGDRDDLANDAVALLARLAEQPAGAAAVLSSSALVTRL VDFLGASASRSAKDHCAALLASLCRHGGDAHGLRAEQRQRGAAPGCGQSDDGRRRASGRQ EQRAAGRADSGRARRAEEGAAMAEVAEGGAWQRWASSAGLLSPPRCRRKRGAWRRRW

Transcript Sequence

Transcript ID	Os08t0415600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19875348:19881382:1 gene:Os08g0415600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 5, U-box protein 5 description:Similar to ubiquitin-protein ligase. (Os08t0415600-00)
Sequence	ATGACGCCGCCGCCGCCGCCGCCGCGCCGCCGGATGCTGGCGATGCCGGCGGTGTGCCCA TGCGAGGACATCTCGCCCGGGACGCTGCTGGCGTCGCTCGCCACGCTTTCGGCCGACGTC GCCGACGGGTGCGACGTGGACAGGCTGCCGGCGCTCCGGGGCGGCGTCGGCGTGGCCGTG CGCGTCGCCGGGTTGCTCCGGGAGTTCCTTGAGGAGGTCCGGTGGGCGGCGGCGGCGGAG CTCCCCGGTGGCTCTGTGCTGGGGATGTCCGAGCTGCACGTGGCGTTGCAGAAGATGCGG TTCTTGCTAGAGGATTGCGGGAGGAAGGGGGCGCGGATGTGGGTGCTGATGAACGCGGAG GCTGTGGCGTCGGAGCTGCGGGTGGTGCTCGGCTCGGTGGCGACGGCGATGGACGTGCTC CCCGCCGGCGTGGTCGCGGCGTCCGACGACGCCAGGGAGTTCGCGGCGCTGGTGTCGCAG CAGGCGTGGCGCGCCGCGGTGCGGCCGGACGAGGAGGACTCCCGCGCGGCACGGAGCGTG CGGTCGATGCTGGCGCGGTTCAGGAGCGGCGCCACGCCGGACGCCGAGGACGCGAGGCTG GTGCTCGGCCGCGTCGGCGTCGCCAGCTGGTGGGACTGCTCCCAGGAGGTGTCCTTCCTC GAGGCCGAGATGCTCGAGCGGCTGGAGGCCGGCGGCGAGAACGACAACGACCTCGTGCTC ATCAGCGGCCTCTTGACGTTCCTGCTCTACTGCCGCGTCGTCCTGTTCGACCGCATTGAT TACGGCAAGGCTGATGAGCCGGCGCCGGCGCCGGCGCCGAGGGCGGCGAGCTACTTGGCG CGAATCAATCCGGAGGGGCTGCAATGCCCGATCACGCTGGAGCTGATGACTGATCCGGTG ACATTGGCCACCGGCCAGACCTACGACCGCGCGTCGATCAAGCGGTGGGTGAAGAGCGGG TGCCGGACGTGCCCCGTCACCGGCGAGAAGCTCCGTAGCGCCGACGTCGTGCCGAACGTC GCGGTGCGCGGGATCGTCGAGCAGCTGCTGCTCAGCAGCGGCGTCTCGCTCCACGAGCCG AGCAGCAAGCACCGGTGCGCGGTCGACAAGACGGCCTCGCCGTTCGGTGCCGCGGCGGCC GGCGGCGCGCGCCTCGCCGTGGCGTTCCTCGTGTCCAAGCTGTGCCGTGGCACGCCGGAG GAGCAGAAGAAGGCGACGTACGAGTGCCGGAAGCTGTCGAAGCGGAACGTGTTCCACCGG GCGTGCCTCGTCGACGCCGGCGCCGTGCCATGGCTGCTCCACCTCCTCTCCTCCCCGGAC GCCTCCGTCCAGGACAATGCCGTGGCTGGCCTCCTCAACCTCTCCAAGCACCCCGCCGGC AGGAGGGCGCTCGTCGAGGCCGGCGGGCTGGGCCTCATCGTCGACGCCGTGAGCGTGGCC GCCAAGGTGGAGGCGCAGCAGAACGCGGCGGCCATCCTGTTCTACCTCTCGTCGGACGCC GGCTACTGCGATGAGATCAGCCGCATCCCGGAGGCGATCCCGACGCTGGTCCGGCTCGTG CGGGAGGGCGCGTACCGCGGCCGGAAGAACGCGCTGGTGAGCCTCTACGGCGTGCTCCAG CGCGGCGCGGGCGGCCACGGCAGGGCGGTGTCCGCCGGCGCCGTGGCGGCGCTCGCGTCC CTGCTGCCCGGCGACCGCGACGACCTCGCCAACGACGCCGTCGCGCTGCTGGCGAGGCTC GCCGAGCAGCCCGCCGGCGCGGCGGCCGTCCTCTCCAGCTCGGCGCTCGTCACGCGGCTC GTCGACTTCCTCGGCGCGTCGGCGTCGCGGTCGGCCAAGGACCACTGCGCGGCGCTGCTG GCGTCGCTGTGCCGGCACGGCGGCGACGCGCACGGCTTGCGGGCGGAGCAGCGGCAGCGC GGAGCGGCGCCAGGATGCGGGCAGAGCGATGATGGTCGGCGGCGGGCGAGCGGAAGGCAA GAGCAGCGGGCTGCGGGTAGAGCGGACAGCGGGCGAGCCCGGCGGGCGGAGGAGGGGGCC GCAATGGCGGAGGTGGCCGAAGGAGGAGCGTGGCAGCGGTGGGCGAGCTCCGCCGGCCTA CTCAGCCCACCACGTTGCCGAAGAAAGAGAGGAGCATGGCGACGACGGTGGTGA