Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0414700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:19830425:19836080:-1 gene:Os08g0414700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Trehalose-6-phosphate synthase (Fragment). (Os08t0414700-01)
Sequence	ATGGTTTCAAAATCTTATTCAAATCTGTTAGAAATGAGTTGTGGAGATGGAGTTGACTTT CGGCAACCTTTTAAATCTCTTCCTCGTGTGGTAACCTCTCCTGGCATTATATCTGATCCT GATTGGGACACTAGAAGTGATGGCGATTCAGTTGGTTCAGCATCTTCTGTTGAGAGGAAA ATAATTGTTGCCAACTTCCTTCCACTGAACTGTACAAAAGATGAAGCTGGGCAATGGTCC TTCTCAAGGGATGATGATGCACTGCTCATGCAACTTAAAGATGGTTTTTCAAATGAGACT GATGTCATTTATGTGGGTAGTTTGAAGGTTCAGGTAGATCCCAGTGAGCAGGATCAAGTT GCACAGAAGCTTCTTAGAGATTACCGATGCATACCTACTTTTCTCCCTCCTGACCTCCAG CAGCAGTTCTATCATGGCTTCTGTAAACAGCAATTGTGGCCACTTTTCCACTATATGCTT CCCATTTGTCTTGACAAAGGTGAGCTCTTTGATCGCTCCCTGTTTCAAGCCTATGTCCGA GCTAACAAACTCTTTGCCGACAAAGTTATGGAAGCTATTAATACGGATGATGATCATGTC TGGGTTCATGATTATCACCTCATGCTTCTCCCAACATTTCTGAGGAAGAGGTTACACCGA ATAAAGCTAGGATTTTTTCTCCACAGTCCATTTCCCTCCTCAGAAATCTACAGGTCACTG CCTGTAAGGGATGAGATCCTGAAGTCATTGCTTAATGCTGATCTTATTGGTTTCCAAACA TTTGACTATGCCCGCCACTTCCTTTCTTGTTGCAGCAGATTATTGGGTCTGCATTATGAA TCAAAGCGCGGTTACATTGGAATAGATTACTTTGGAAGAACAGTGAGCCTGAAGATCCTC TCAGTGGGTGTCCATGTTGGCCGTCTTGAGTCCATCCTAAAGTTGCCTGCTACAGTAAAG AAGGTTCAAGAAATTGAACAAAGGTATAAAGGCAAGATGCTCATGTTAGGTGTAGATGAC ATGGACATCTTCAAAGGAATCAGTCTAAAACTGCTTGGGTTGGAGCTACTTCTAGATAGG AACCCGAAACTCAGAGGGAAGGTTGTCCTTGTACAGATTGTCAATCCAGCAAGAAGCACA GGGAAAGACGTGGAGGAAGCAATAACAGAATCTGTCTCTGTAGCTGAAAGAATCAACCTT AAGTATGGCTCTGTAGATTACAAGCCTGTTGTCCTTATTGATCATCGCATACCATTTTAT GAAAAGATTGCATTCTATGCTGCATCTGATTGTTGTATTGTAAATGCTCTGAGGGATGGT ATGAACTTGGTACCATATGAGTACACTGTTTGCCGGCAGGGAAATGAGGAGATAGATAAT GCCAGAGGCAGTGACACAAATTGCCATCACACAAGCACACTAATTGTGTCTGAGTTTGTT GGTTGCTCACCATCTCTTAGTGGTGCTTTCAGGGTAAATCCTTGGAGTGTTGACGATGTG GCTGATGCCTTACACCATGCAACAGACTTGACTGAATCCGAGAAAAGGCTACGGCATGAA AAGCACTACCGTTATGTTAGATCTCATAGTGTTGCTTACTGGGCTCATAGCTTTGCTCAA GATCTGGAAAGGGCATGCAAAGATCACTACAGCCGAAGGTGCTGGGCTATTGGTTTTGGT CTGAACTTCAGAGTTATTGCTCTTTCTCCTGGCTTTAGAAAGCTCTCTTTGGAACACTTT GCTTCTTCTTACAACAAGGCTACCAGAAGGGCAATATTTCTTGACTATGATGGCACTCTT GTACCCCAGTCATCAATCAATAAAGCTCCAAGCGATGAACTTATTACTATTCTCAACAGC TTGTGTGATGACCCGAAGAATGATGTATTCATAGTCAGTGGAAGAGCGCGTAGTTTGCTT GATGAGTGGTTTGCTCCATGTCAGAAGCTTGGTATTGCAGCAGAACATGGCTATTTTGTC AGATGGAACAAAGCAGCTGAATGGGAATCAAGCTATCCAAACCATGATTTTGAGTGGAAG CACATCGCTGAACCGGTCATGCAAGTTTACACCGAAACAACTGATGGGTCCTCCATAGAG CCAAAGGAAAGTGCTCTAGTATGGCATTATTTGGATGCAGACCATGACTTCGGTTCCTGC CAAGCAAAGGAACTACTGGGTCATCTTGAAAGGGTGCTATCAAATGAACCTGTTGTTGTG AAGTGTGGTCATTACATTGTTGAAGTCAAACCACAGGGAGTTAGCAAGGGTCTTGTTGTG GACAAGGTAATTCACAGATTGATGAACAACGGGAAGACGCCTGATTTCGTAGTGTGCATC GGTAACGATCGATCTGATGAGGACATGTTCAAAAGCATCGACAGCATGACCTCCAGCTCC GCATTCCCTGCAGTTCCAGAAGTCTTTGCCTGTTCAGTTGGTCAGAAACCCAGCAAGGCA AAGTACTATGTCGACGATGCTGGTGAAGTAGTAAGATTGCTCAAGAATGTAGCTGGCATT TCGTCGCACCGGGAGGCCGTCAGCCATGGACGTGTGACCTTCAGGGATGTGATGGATTAT GTGGAGTGA

Peptide Sequence

PEP ID	Os08t0414700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:19830425:19836080:-1 gene:Os08g0414700 transcript:Os08t0414700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Trehalose-6-phosphate synthase (Fragment). (Os08t0414700-01)
Sequence	MVSKSYSNLLEMSCGDGVDFRQPFKSLPRVVTSPGIISDPDWDTRSDGDSVGSASSVERK IIVANFLPLNCTKDEAGQWSFSRDDDALLMQLKDGFSNETDVIYVGSLKVQVDPSEQDQV AQKLLRDYRCIPTFLPPDLQQQFYHGFCKQQLWPLFHYMLPICLDKGELFDRSLFQAYVR ANKLFADKVMEAINTDDDHVWVHDYHLMLLPTFLRKRLHRIKLGFFLHSPFPSSEIYRSL PVRDEILKSLLNADLIGFQTFDYARHFLSCCSRLLGLHYESKRGYIGIDYFGRTVSLKIL SVGVHVGRLESILKLPATVKKVQEIEQRYKGKMLMLGVDDMDIFKGISLKLLGLELLLDR NPKLRGKVVLVQIVNPARSTGKDVEEAITESVSVAERINLKYGSVDYKPVVLIDHRIPFY EKIAFYAASDCCIVNALRDGMNLVPYEYTVCRQGNEEIDNARGSDTNCHHTSTLIVSEFV GCSPSLSGAFRVNPWSVDDVADALHHATDLTESEKRLRHEKHYRYVRSHSVAYWAHSFAQ DLERACKDHYSRRCWAIGFGLNFRVIALSPGFRKLSLEHFASSYNKATRRAIFLDYDGTL VPQSSINKAPSDELITILNSLCDDPKNDVFIVSGRARSLLDEWFAPCQKLGIAAEHGYFV RWNKAAEWESSYPNHDFEWKHIAEPVMQVYTETTDGSSIEPKESALVWHYLDADHDFGSC QAKELLGHLERVLSNEPVVVKCGHYIVEVKPQGVSKGLVVDKVIHRLMNNGKTPDFVVCI GNDRSDEDMFKSIDSMTSSSAFPAVPEVFACSVGQKPSKAKYYVDDAGEVVRLLKNVAGI SSHREAVSHGRVTFRDVMDYVE

Transcript Sequence

Transcript ID	Os08t0414700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19830425:19836080:-1 gene:Os08g0414700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Trehalose-6-phosphate synthase (Fragment). (Os08t0414700-01)
Sequence	CTAATCAATCTCTCGCGTTCTTGGCCGCCGTCTCCATCTCTCTCTCACTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCGGCTTTGGTTTGCCGCGTTACATCCGCGAAAAGGAGGAGGAA ACAGGCGAAGCGAGGAGCTCCAGAGGGAGAAATTCCGTAGAAAGCGAGGAGCGTCGGCTC CCGCTTTTGATCTGTGGGAATTCAAACGGTGGTGCTTGCTATTTCGACGTAAGGGCTTAA ACGAATTGGTTTGTCACTATTTTGGTTTCAACACAGAAGGTTGTGGGACCATGGTTTCAA AATCTTATTCAAATCTGTTAGAAATGAGTTGTGGAGATGGAGTTGACTTTCGGCAACCTT TTAAATCTCTTCCTCGTGTGGTAACCTCTCCTGGCATTATATCTGATCCTGATTGGGACA CTAGAAGTGATGGCGATTCAGTTGGTTCAGCATCTTCTGTTGAGAGGAAAATAATTGTTG CCAACTTCCTTCCACTGAACTGTACAAAAGATGAAGCTGGGCAATGGTCCTTCTCAAGGG ATGATGATGCACTGCTCATGCAACTTAAAGATGGTTTTTCAAATGAGACTGATGTCATTT ATGTGGGTAGTTTGAAGGTTCAGGTAGATCCCAGTGAGCAGGATCAAGTTGCACAGAAGC TTCTTAGAGATTACCGATGCATACCTACTTTTCTCCCTCCTGACCTCCAGCAGCAGTTCT ATCATGGCTTCTGTAAACAGCAATTGTGGCCACTTTTCCACTATATGCTTCCCATTTGTC TTGACAAAGGTGAGCTCTTTGATCGCTCCCTGTTTCAAGCCTATGTCCGAGCTAACAAAC TCTTTGCCGACAAAGTTATGGAAGCTATTAATACGGATGATGATCATGTCTGGGTTCATG ATTATCACCTCATGCTTCTCCCAACATTTCTGAGGAAGAGGTTACACCGAATAAAGCTAG GATTTTTTCTCCACAGTCCATTTCCCTCCTCAGAAATCTACAGGTCACTGCCTGTAAGGG ATGAGATCCTGAAGTCATTGCTTAATGCTGATCTTATTGGTTTCCAAACATTTGACTATG CCCGCCACTTCCTTTCTTGTTGCAGCAGATTATTGGGTCTGCATTATGAATCAAAGCGCG GTTACATTGGAATAGATTACTTTGGAAGAACAGTGAGCCTGAAGATCCTCTCAGTGGGTG TCCATGTTGGCCGTCTTGAGTCCATCCTAAAGTTGCCTGCTACAGTAAAGAAGGTTCAAG AAATTGAACAAAGGTATAAAGGCAAGATGCTCATGTTAGGTGTAGATGACATGGACATCT TCAAAGGAATCAGTCTAAAACTGCTTGGGTTGGAGCTACTTCTAGATAGGAACCCGAAAC TCAGAGGGAAGGTTGTCCTTGTACAGATTGTCAATCCAGCAAGAAGCACAGGGAAAGACG TGGAGGAAGCAATAACAGAATCTGTCTCTGTAGCTGAAAGAATCAACCTTAAGTATGGCT CTGTAGATTACAAGCCTGTTGTCCTTATTGATCATCGCATACCATTTTATGAAAAGATTG CATTCTATGCTGCATCTGATTGTTGTATTGTAAATGCTCTGAGGGATGGTATGAACTTGG TACCATATGAGTACACTGTTTGCCGGCAGGGAAATGAGGAGATAGATAATGCCAGAGGCA GTGACACAAATTGCCATCACACAAGCACACTAATTGTGTCTGAGTTTGTTGGTTGCTCAC CATCTCTTAGTGGTGCTTTCAGGGTAAATCCTTGGAGTGTTGACGATGTGGCTGATGCCT TACACCATGCAACAGACTTGACTGAATCCGAGAAAAGGCTACGGCATGAAAAGCACTACC GTTATGTTAGATCTCATAGTGTTGCTTACTGGGCTCATAGCTTTGCTCAAGATCTGGAAA GGGCATGCAAAGATCACTACAGCCGAAGGTGCTGGGCTATTGGTTTTGGTCTGAACTTCA GAGTTATTGCTCTTTCTCCTGGCTTTAGAAAGCTCTCTTTGGAACACTTTGCTTCTTCTT ACAACAAGGCTACCAGAAGGGCAATATTTCTTGACTATGATGGCACTCTTGTACCCCAGT CATCAATCAATAAAGCTCCAAGCGATGAACTTATTACTATTCTCAACAGCTTGTGTGATG ACCCGAAGAATGATGTATTCATAGTCAGTGGAAGAGCGCGTAGTTTGCTTGATGAGTGGT TTGCTCCATGTCAGAAGCTTGGTATTGCAGCAGAACATGGCTATTTTGTCAGATGGAACA AAGCAGCTGAATGGGAATCAAGCTATCCAAACCATGATTTTGAGTGGAAGCACATCGCTG AACCGGTCATGCAAGTTTACACCGAAACAACTGATGGGTCCTCCATAGAGCCAAAGGAAA GTGCTCTAGTATGGCATTATTTGGATGCAGACCATGACTTCGGTTCCTGCCAAGCAAAGG AACTACTGGGTCATCTTGAAAGGGTGCTATCAAATGAACCTGTTGTTGTGAAGTGTGGTC ATTACATTGTTGAAGTCAAACCACAGGGAGTTAGCAAGGGTCTTGTTGTGGACAAGGTAA TTCACAGATTGATGAACAACGGGAAGACGCCTGATTTCGTAGTGTGCATCGGTAACGATC GATCTGATGAGGACATGTTCAAAAGCATCGACAGCATGACCTCCAGCTCCGCATTCCCTG CAGTTCCAGAAGTCTTTGCCTGTTCAGTTGGTCAGAAACCCAGCAAGGCAAAGTACTATG TCGACGATGCTGGTGAAGTAGTAAGATTGCTCAAGAATGTAGCTGGCATTTCGTCGCACC GGGAGGCCGTCAGCCATGGACGTGTGACCTTCAGGGATGTGATGGATTATGTGGAGTGAA CCACCTAATCTTTGTAACATCCAAACTTGTGTACATTCCAATGTCTTCATCTAGATTTGG CCAAAAGCATGAATCATCACCACCATTAGGACAACTACAGGAGTGCAAGCGGAAGCTCTG CATTTTTAGTTTAGGTGATGTATACTCATATGTAGGCAATTTTGATAGTTGATGAGGTTC TTGCTGGAGAACTGCACTGTGAAAGAAAAGCCCCCTGGCTTTGAATAGCCATCGACTTGT TTCACTTGCCAGTTATTACCAGTTGCCAGTGTTTACCTGAATGACTGAATCCAATCTCCT GCTTC