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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0412500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:19735721:19738994:-1 gene:Os08g0412500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0041 domain containing protein. (Os08t0412500-01)
Sequence

ATGGCGACGGCGGCGAAGGCGTTCTGGAACAGCCCCGTCGGCCCCAGGACCACCCACTTC
TGGGGTCCCGTCGCTAACTGGGGCTTCGTCCTCGCGGGCTTAGTTGACATGAACAAGCCT
CCTGAAATGATATCCGGCAATATGACAGCAGCCATGTGTGTGTATTCTGGACTCTTTATG
AGGTTTGCGTGGATGGTACAACCGCGGAACTACTTGCTTCTGGCTTGTCACGCCTCCAAC
GAAAGCGTTCAGTTATATCAGTTCTCACGCTGGGCGAGAGCTCAGGGGTACCTGGAGAAT
AAAGAGCCAGAGGGCCAGCAGTGA

Peptide Sequence

PEP ID

Os08t0412500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:19735721:19738994:-1 gene:Os08g0412500 transcript:Os08t0412500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0041 domain containing protein. (Os08t0412500-01)
Sequence

MATAAKAFWNSPVGPRTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTAAMCVYSGLFM
RFAWMVQPRNYLLLACHASNESVQLYQFSRWARAQGYLENKEPEGQQ

Transcript Sequence

Transcript ID

Os08t0412500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:19735721:19738994:-1 gene:Os08g0412500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0041 domain containing protein. (Os08t0412500-01)
Sequence

AATCCCCTCGCTCCCTAAATCACGCTCGTCAACCGCGTCGGCCTCTCCAACCGCCGCCGC
CTCCGCCGCCGTCGCCGTCGCCGTCGTCCCGTAGCTAAGTGGTGATTTGGAGCAGCTCGG
CGGAGGGGCAGATTCCCGGGCATGGCGACGGCGGCGAAGGCGTTCTGGAACAGCCCCGTC
GGCCCCAGGACCACCCACTTCTGGGGTCCCGTCGCTAACTGGGGCTTCGTCCTCGCGGGC
TTAGTTGACATGAACAAGCCTCCTGAAATGATATCCGGCAATATGACAGCAGCCATGTGT
GTGTATTCTGGACTCTTTATGAGGTTTGCGTGGATGGTACAACCGCGGAACTACTTGCTT
CTGGCTTGTCACGCCTCCAACGAAAGCGTTCAGTTATATCAGTTCTCACGCTGGGCGAGA
GCTCAGGGGTACCTGGAGAATAAAGAGCCAGAGGGCCAGCAGTGAAGATGAAGTCTCTTG
CTCAATAAGTAAAGCTTCGTTTCCTGGATTTCTGTAACGCTTTATTCCGTGCCCTATAGT
TGTCTGCATTGTGCATTGTATAAATATCCTTTATATAAATATTTGGAGAAAAATAAGTAT
TTATGACTG