Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0408200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:19522108:19528779:1 gene:Os08g0408200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALT RESPONSIVE WD40 PROTEIN 4 description:WD40 subfamily protein, Salt stress (Os08t0408200-01)
Sequence	ATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTC ATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCT AGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGG GATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATCAGTAT CGGGAGATGAAGATGAAGAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAA GCTCTGAAGGACTGCAAGAAAGTTGAAAAGGATAGTCCTTACTACGATTTCCAGTACAAT ACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACA ACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCATTGGAC CAGACAAGTACTGAGCTAATCAATGCGGATGACTGCATTATACCAAAACAGAGAGGGCAT GGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGATAGTTTATTG GTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTT TTCAGCACAAGAGTTACAGATGATGAGAATGCTATTACCAACTCTTTGGAGATATATCAG GATCCCACTGGATCTAGACGGTTGGTGGCTGCTAACAATGACTGCTCTGTCAGAATTTTT GACATTGAGTACTTTGATTTGCTGAAGCACTATGTCTTCCCATGGTCTGTGAATAGCGTT TCGGTGAGCCCAAAAGGGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTA GTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTC GCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGT CGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGC TCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTG GATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTG TTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATA GCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTG AACTGCATGTGGTGA

Peptide Sequence

PEP ID	Os08t0408200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:19522108:19528779:1 gene:Os08g0408200 transcript:Os08t0408200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALT RESPONSIVE WD40 PROTEIN 4 description:WD40 subfamily protein, Salt stress (Os08t0408200-01)
Sequence	MDEFELEDNLELLLQSIQELIEDQGENNPFGAANHDELIASLLHNNQENPLTDVSVEDVR DGKDMQGIPWEKIVFRRDQYREMKMKNYRNYQNLSYAREEALKDCKKVEKDSPYYDFQYN TRRARPSIVHFQLRNLVWATTKHDVYTVHNQSVTHWSSLDQTSTELINADDCIIPKQRGH GSQSVAMVQVTTMAVDDSLLVIGGFQGELICKRLEDDGVLFSTRVTDDENAITNSLEIYQ DPTGSRRLVAANNDCSVRIFDIEYFDLLKHYVFPWSVNSVSVSPKGGLFAVLGDHEDGLV VDPKCGKAIGALKGHLDYSFASAWHPDGNILATGSQDTTCRLWDIRNLSESVAVLGGRMG SIRCIKFSSDGRFLATAEPVDFVHIYDSYADYGRSHEIDLFGEIAGLSFSPDAEALYVGI ADPTYGGLIEFNRRHQHHYLNCMW

Transcript Sequence

Transcript ID	Os08t0408200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19522108:19528779:1 gene:Os08g0408200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SALT RESPONSIVE WD40 PROTEIN 4 description:WD40 subfamily protein, Salt stress (Os08t0408200-01)
Sequence	TCTCCCCCTCGCCTCCGCGTCGCCGCCTTCAAAAATACTAATAAAAAAGAAAAAAAACGC AAAAAGAAAAGGGAGGGTAGGAGAGAAAAAAAAAAAAAAGAAAAAAACTTCCCGAATTCC CCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGC GGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGG ATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACA ACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGG AGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGA TCCCCTGGGAGAAGATTGTGTTCCGGAGGGATCAGTATCGGGAGATGAAGATGAAGAATT ACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAG TTGAAAAGGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAA TTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGG TGCACAACCAATCAGTGACACATTGGTCATCATTGGACCAGACAAGTACTGAGCTAATCA ATGCGGATGACTGCATTATACCAAAACAGAGAGGGCATGGTTCACAGTCCGTTGCAATGG TCCAGGTCACAACTATGGCTGTAGATGATAGTTTATTGGTAATTGGTGGTTTTCAGGGGG AGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATG ATGAGAATGCTATTACCAACTCTTTGGAGATATATCAGGATCCCACTGGATCTAGACGGT TGGTGGCTGCTAACAATGACTGCTCTGTCAGAATTTTTGACATTGAGTACTTTGATTTGC TGAAGCACTATGTCTTCCCATGGTCTGTGAATAGCGTTTCGGTGAGCCCAAAAGGGGGAC TGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGG CAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATG GCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACC TATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCT CTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATT CATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGT CATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCC TCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATT TGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAA CTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGC TTTAGTTTTTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTC CCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCC TATTTCATTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACG CAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCA CATCCGGAAGAAGATTTTAGCTCAATGATCATATGTGTTCCACTCGGTTGTTCGGCTCTC GTTTATACAAGAACAGGGAATTTCCCAGCAGCGACCTTTTCAGTCCTTGGGACACGTAGA AATTGCTAGTCGGTGGCTCGGAGCCGTTCTCTCTTTATCAAACCGAACATGCTTGGAATT CTCTATTATCATAATTTTGCAATATCCATTTATAGATATTGAAATCAAAGTACGTTACAT CC