Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0407000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:19456436:19460442:1 gene:Os08g0407000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small GTP-binding protein domain containing protein. (Os08t0407000-01)
Sequence	ATGGCTCGCGCTCTCTCTCGCCTCCTCCTCCCGCCCCTCTTCCTATGCCGCCCTCTCCCA CTCCCACCCCTCCTCCACCGCCGCCGCCGCGTCGTCCTAAACCCTAGCCCCAGAACCCTC ACCACGCGCGCCGAGGCCCTCTTCTCCCGCCACTCCCACCTCCTCCCCGCCGACGACCGC TCCCCCTCCCCCTCCACCCGCGGCTCCGTCCAGCCGCCGCCGGACTATGGCGGCGGCGGA GGCGGAGCGGGCCCCGGGACCATCGCCGCCATCGTCACCTCCCTCGGCGGCGGCCCCGCG GCGGTGGGGATCGTGCGGCTATCCGGCCCCGACGCGGCCGCCGTCGCGGGGCGCGTGTTC CGGCCGGCCAGGAGGGCGGCGCCGCCGTGGCGGCCGCGCAGCCATTTCGTCGAGTACGGG GTCGCGCTCGACCGCGATGGCGGCGTCATCGACGAGGTCTTAGTGGTGCCGATGCTAGCT CCGAGATCGTACACGCGGGAGGATGTGGTGGAGCTCCAGTGCCATGGGAATGACCTGTGC TTGCGGCGTGTGCTCAGGGCCTGCTTGGAAGCTGGTGCTAGGCTTGCTGACCCTGGTGAG TTCACTGTTCGTGCGTTTCTGAATGGGAGGTTGGACTTGGCACAAGCGGAGAATGTGTCA AGGCTCATTTCAGCCAAATCTGCAGCTGCGGCAGACTCAGCATTGGCTGGCATACAGGGA GGCTTTTCTGCACTAGTAAAATCACTGAGATCAAGGTGCATAGAATTGCTCACTGAGATT GAGGCCCGTCTAGACTTTGAAGATGAATTGCCTCCTTTGGATCTAACAATGCTGGTCAGC AAAATTAATGGTATGAGACAAGAGGTTCAGGATGCTTTGGACACTGCTAATTATGATAAG CTGCTACAATCTGGTCTGCAGGTAGCAATAATTGGCCGCCCAAATGTTGGCAAGTCAAGC CTGCTGAATGCTTGGAGTAAGAGTGAAAGGGCTATTGTTACTGAAATAGCTGGAACCACA AGGGATGTAGTAGAAGCAAATGTCTCAATTCATGGCATCCCTATTACCCTTCTAGATACT GCTGGTATAAGAGAAACTGATGACATCGTGGAAAAAATTGGTGTGGAACGATCAGAAGCT GCTGCACTGGGAGCTGATCTGATTATTATGACAATAAGTGCAGTTGATGGGTGGACTGAA GATGACACTAAACTTATTGAGCATGTGTTGATCAGTAAGAAATCTTCAGGTGCTCCAGTG CCAATGGTCCTTGTAATCAACAAGGTAGATTGTGCACCATTTATTTCAGGAGAACAGTTT GAACAATTCCATGGAGTTTTCAAAAAACATGTGCAAACATGTGCAGTCACTGGTAAAGGC ATTTCTGAGTTGGAGAAGGCTATAATAGAGGTCAGAGGTCTTGAGCCTGTACCATCAGAG GGACGGCGATGGACTGTAAATCAGAGGCAATTTGAACAGCTATTGAGGACCCAACAAGCT TTTACTAGGCTAGAGTCATCTATCAACGAGCAGTTGCCGATGGACTTCTGGACTATAGAC TTGAGGGAAGCAGCATTGGCTCTTGCAACAATCAGCGGGGAGGATATCTCTGAAGAAGTC CTGAGCAGCATATTCAGCAAATTTTGCATTGGAAAATGA

Peptide Sequence

PEP ID	Os08t0407000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:19456436:19460442:1 gene:Os08g0407000 transcript:Os08t0407000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small GTP-binding protein domain containing protein. (Os08t0407000-01)
Sequence	MARALSRLLLPPLFLCRPLPLPPLLHRRRRVVLNPSPRTLTTRAEALFSRHSHLLPADDR SPSPSTRGSVQPPPDYGGGGGGAGPGTIAAIVTSLGGGPAAVGIVRLSGPDAAAVAGRVF RPARRAAPPWRPRSHFVEYGVALDRDGGVIDEVLVVPMLAPRSYTREDVVELQCHGNDLC LRRVLRACLEAGARLADPGEFTVRAFLNGRLDLAQAENVSRLISAKSAAAADSALAGIQG GFSALVKSLRSRCIELLTEIEARLDFEDELPPLDLTMLVSKINGMRQEVQDALDTANYDK LLQSGLQVAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEANVSIHGIPITLLDT AGIRETDDIVEKIGVERSEAAALGADLIIMTISAVDGWTEDDTKLIEHVLISKKSSGAPV PMVLVINKVDCAPFISGEQFEQFHGVFKKHVQTCAVTGKGISELEKAIIEVRGLEPVPSE GRRWTVNQRQFEQLLRTQQAFTRLESSINEQLPMDFWTIDLREAALALATISGEDISEEV LSSIFSKFCIGK

Transcript Sequence

Transcript ID	Os08t0407000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19456436:19460442:1 gene:Os08g0407000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small GTP-binding protein domain containing protein. (Os08t0407000-01)
Sequence	AATGGCTCGCGCTCTCTCTCGCCTCCTCCTCCCGCCCCTCTTCCTATGCCGCCCTCTCCC ACTCCCACCCCTCCTCCACCGCCGCCGCCGCGTCGTCCTAAACCCTAGCCCCAGAACCCT CACCACGCGCGCCGAGGCCCTCTTCTCCCGCCACTCCCACCTCCTCCCCGCCGACGACCG CTCCCCCTCCCCCTCCACCCGCGGCTCCGTCCAGCCGCCGCCGGACTATGGCGGCGGCGG AGGCGGAGCGGGCCCCGGGACCATCGCCGCCATCGTCACCTCCCTCGGCGGCGGCCCCGC GGCGGTGGGGATCGTGCGGCTATCCGGCCCCGACGCGGCCGCCGTCGCGGGGCGCGTGTT CCGGCCGGCCAGGAGGGCGGCGCCGCCGTGGCGGCCGCGCAGCCATTTCGTCGAGTACGG GGTCGCGCTCGACCGCGATGGCGGCGTCATCGACGAGGTCTTAGTGGTGCCGATGCTAGC TCCGAGATCGTACACGCGGGAGGATGTGGTGGAGCTCCAGTGCCATGGGAATGACCTGTG CTTGCGGCGTGTGCTCAGGGCCTGCTTGGAAGCTGGTGCTAGGCTTGCTGACCCTGGTGA GTTCACTGTTCGTGCGTTTCTGAATGGGAGGTTGGACTTGGCACAAGCGGAGAATGTGTC AAGGCTCATTTCAGCCAAATCTGCAGCTGCGGCAGACTCAGCATTGGCTGGCATACAGGG AGGCTTTTCTGCACTAGTAAAATCACTGAGATCAAGGTGCATAGAATTGCTCACTGAGAT TGAGGCCCGTCTAGACTTTGAAGATGAATTGCCTCCTTTGGATCTAACAATGCTGGTCAG CAAAATTAATGGTATGAGACAAGAGGTTCAGGATGCTTTGGACACTGCTAATTATGATAA GCTGCTACAATCTGGTCTGCAGGTAGCAATAATTGGCCGCCCAAATGTTGGCAAGTCAAG CCTGCTGAATGCTTGGAGTAAGAGTGAAAGGGCTATTGTTACTGAAATAGCTGGAACCAC AAGGGATGTAGTAGAAGCAAATGTCTCAATTCATGGCATCCCTATTACCCTTCTAGATAC TGCTGGTATAAGAGAAACTGATGACATCGTGGAAAAAATTGGTGTGGAACGATCAGAAGC TGCTGCACTGGGAGCTGATCTGATTATTATGACAATAAGTGCAGTTGATGGGTGGACTGA AGATGACACTAAACTTATTGAGCATGTGTTGATCAGTAAGAAATCTTCAGGTGCTCCAGT GCCAATGGTCCTTGTAATCAACAAGGTAGATTGTGCACCATTTATTTCAGGAGAACAGTT TGAACAATTCCATGGAGTTTTCAAAAAACATGTGCAAACATGTGCAGTCACTGGTAAAGG CATTTCTGAGTTGGAGAAGGCTATAATAGAGGTCAGAGGTCTTGAGCCTGTACCATCAGA GGGACGGCGATGGACTGTAAATCAGAGGCAATTTGAACAGCTATTGAGGACCCAACAAGC TTTTACTAGGCTAGAGTCATCTATCAACGAGCAGTTGCCGATGGACTTCTGGACTATAGA CTTGAGGGAAGCAGCATTGGCTCTTGCAACAATCAGCGGGGAGGATATCTCTGAAGAAGT CCTGAGCAGCATATTCAGCAAATTTTGCATTGGAAAATGACTGGCAAGCACGGCAGTAAC ATATATCGGCGCATAAAATTATGTGAATTGCCAGTCAGTCACCATCCGACTCATGTTTGA GACACAACAGGAGTACATGACTTAGTTTGCTCGAACATATTGATGATTGAGCTCAATGAC TGGCTTCGAGTTTACTAGATTTTTCACCGTTCACTTGAGCAGCTGTGCTATATATGCTTG CAAAACTTGCCTCATCTACACGAGCAGTTTAGAGGCAGTTTATAGCTCTGTAATGGAAGA AGACTCATATGTACTGCTTCGATCATCCTCACAACTGTTTTGAATGACTGCCACAATGTA TGGATATGCCTAGTGCTTGTGATTGGCAATTGTGCTTTGGTCGCGCATCTAATGGCAGAC GGCTTGACCC