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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0403300-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:19244409:19245490:1 gene:Os08g0403300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os08t0403300-00)
Sequence

ATGGGAGGCACGCTGCACTACCTGTCTGATCTGCTGCTGGGTGGCAGCAGCGGCAAGACT
AGCCACAAGAAGAAGAGGCAGTTCAACACGGTGGAGCTGAAGGTGAGGATGGACTGCGAC
GGCTGCGAGCTCAAGGTCAGGAACACCCTTGCCAACATGAAAGGGGTGCAGTCGGTGGAG
ATAAACAGGAAGCAGCAGAAGGTGACGGTGCAGGGGATGGTGGACACGCAGCGGGTGCTG
CGGCGGGCGCAGTCGACGGGGAAGCGCACCGAGCTGTGGCCGTACGTCCCCTACACCAAC
CCGTACGTGGCGCCGCCGGCGGCGTACGACAAGAAGGCGCCGAACGGGCACATCCGCCGG
GTGGACGCCGTGCTGCCGGTCACCCCCAGCCAGGAGGAGCGCCTCGCCACCCTCTTCAGC
GACGACAACCCCAACGCCTGCGCCGTCATGTGA

Peptide Sequence

PEP ID

Os08t0403300-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:19244409:19245490:1 gene:Os08g0403300 transcript:Os08t0403300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os08t0403300-00)
Sequence

MGGTLHYLSDLLLGGSSGKTSHKKKRQFNTVELKVRMDCDGCELKVRNTLANMKGVQSVE
INRKQQKVTVQGMVDTQRVLRRAQSTGKRTELWPYVPYTNPYVAPPAAYDKKAPNGHIRR
VDAVLPVTPSQEERLATLFSDDNPNACAVM

Transcript Sequence

Transcript ID

Os08t0403300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:19244409:19245490:1 gene:Os08g0403300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os08t0403300-00)
Sequence

AGCAAAGCAAAGGTAGGAAGGAACAAAGGCATCTCAGAGAAAGCTCTTTGCCAGCAACTC
CCACACACTAATCCTTAGCTGCATCACTGCATCCTGACCTTGATGTGCACAAATTGCCTT
CTCTGATTCTCTCCCTGCATCCTCTGTCTATATATAAGCAGCCATTACAAATAGCATGTC
ACCAAATTACCCAAGCTAGCTAGAGATTACAGTACTTGATCTCTTATCTCTTTCCAGGGA
AAAGTTTCTTCTATAATTAATTAGTAGAGTTTGCACTTGATTAGTAACTTTCATTAGAGG
CAAAGTTGAGAAGCATGGGAGGCACGCTGCACTACCTGTCTGATCTGCTGCTGGGTGGCA
GCAGCGGCAAGACTAGCCACAAGAAGAAGAGGCAGTTCAACACGGTGGAGCTGAAGGTGA
GGATGGACTGCGACGGCTGCGAGCTCAAGGTCAGGAACACCCTTGCCAACATGAAAGGGG
TGCAGTCGGTGGAGATAAACAGGAAGCAGCAGAAGGTGACGGTGCAGGGGATGGTGGACA
CGCAGCGGGTGCTGCGGCGGGCGCAGTCGACGGGGAAGCGCACCGAGCTGTGGCCGTACG
TCCCCTACACCAACCCGTACGTGGCGCCGCCGGCGGCGTACGACAAGAAGGCGCCGAACG
GGCACATCCGCCGGGTGGACGCCGTGCTGCCGGTCACCCCCAGCCAGGAGGAGCGCCTCG
CCACCCTCTTCAGCGACGACAACCCCAACGCCTGCGCCGTCATGTGAACC