Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0402600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:19215829:19217807:1 gene:Os08g0402600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0402600-01)
Sequence	GCCCTCCTCTCGCTCGGCCGCCACGCCGACGTGCGCCGCGCGTTTGGGATCCTCGCGTCC GCCGGGGCGCGCCCGGACACGTTCGCGTGGAACAAGGCCGTCCAGGCGTGCGTCGCGGCG GGCGACCTCGGCGAGGCCGTCGGGATGCTCCGGCGGATGGGACGCGACGGCGCGCCGCCG CCCAACGCGTTCTCGTACAACGTGGTCATCGCGGGGATGTGGAGGGCAGGGAGGGGTGGT GACGCCGTTGAGGTGTTCGATGAAATGACGGAGAGGGCCGTGCTGCCGAATCATATCACA TACAATACGATGATTGATGGGCACATCAAGGGCGGCGACCTGGAGGCTGGTTTCAGGCTG CGGGATCAGATGGTGTGTCATGGCTTGAAGCCGAATGCGATTACGTATAATGTGCTCCTG TCCGGTCTGTGCCGTGCTGGCAGGATGGGAGAGACGTCAGCCTTGTTGGATGAAATGGCA TCACAAAAGATGGTGCCCGATGGCTTCACATATAGCATTTTATTTGATGGTCTCTCAAGA AATGGTGACTCAAAGGCAATGCTTTCATTGTTTGGAAAATATTTGAAGAATGGAGTGACA ATTGGAGATTACACTTGTAGTATCTTGTTGAATGGCCTGTGTAAGGATGGCAAAGTTTCA ATTGCTGAAGAGGTTCTTCAGTCACTGGTAAATGCAGGGTTAGTCCCAACAAGGGTGATC TATAACACTCTGATCAATGGATATTGCCAGACTGGAGAGCTTGAAGGGGCCTTCTCAACC TTTGGACAGATGAAGTCGCGGCATATCAAGCCAGATCACATTACCTACAATGCACTAATC AATGGTTTGTGTAAGGCTGAAAGAATCACCAATGCACAAGATCTGTTAATGGAGATGCAG GACAATGGAGTGAATCCAACTGTGGAAACTTTCAATACGCTGATTGATGCTTATGGAAGG ACTGGGCAACTTGAGAAATGTTTCATTGTTCTTTCCGAAATGCAAGAGAATGGGCTAAAA CCAAATGTTGTCTCCTATGGTTCAATTGTCAATGCTTTTTGTAAGAATGGAAAAATCCCA GAAGCTGTAGCTATATTGGATGATATGTTTCATAAAGATGTTTTACCAAATGCCCAGGTG TACAATGCTATCATAGATGCATACGTAGAGCATGGTCCCAATGATCAGGCTTTTATTTTA GTTGAGAAGATGAAGAGTAACGGAATATCTCCAAGTATAGTAACCTACAATTTGCTTATA AAAGGCCTTTGCAACCAGTCGCAGATATCTGAAGCTGAGGAAATTATTAACAGCTTAAGT AATCACAGGTTGATACCTGATGCTGTCAGCTATAATACTTTAATATCAGCATGCTGTTAC AGAGGCAATATTGATAAAGCCTTGGATCTTCAGCAAAGAATGCATAAGTATGGCATCAAA TCTACGGTGAGAACATACCATCAACTTATTAGCGGATTAGGTGGTGCAGGGAGATTAAAT GAAATGGAATATCTGTATCAGAAAATGATGCAAAATAATGTTGTACCCAGTAATGCAATA CATAATATCATGGTTGAGGCCTACTCAAAATATGGAAATGAAATTAAGGCAGAAGATCTG AGGAAGGAAATGTTACAGAAAAGGAACAACCATGATGACACATGA

Peptide Sequence

PEP ID	Os08t0402600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:19215829:19217807:1 gene:Os08g0402600 transcript:Os08t0402600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0402600-01)
Sequence	ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL RKEMLQKRNNHDDT

Transcript Sequence

Transcript ID	Os08t0402600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19215829:19217807:1 gene:Os08g0402600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0402600-01)
Sequence	GCCCTCCTCTCGCTCGGCCGCCACGCCGACGTGCGCCGCGCGTTTGGGATCCTCGCGTCC GCCGGGGCGCGCCCGGACACGTTCGCGTGGAACAAGGCCGTCCAGGCGTGCGTCGCGGCG GGCGACCTCGGCGAGGCCGTCGGGATGCTCCGGCGGATGGGACGCGACGGCGCGCCGCCG CCCAACGCGTTCTCGTACAACGTGGTCATCGCGGGGATGTGGAGGGCAGGGAGGGGTGGT GACGCCGTTGAGGTGTTCGATGAAATGACGGAGAGGGCCGTGCTGCCGAATCATATCACA TACAATACGATGATTGATGGGCACATCAAGGGCGGCGACCTGGAGGCTGGTTTCAGGCTG CGGGATCAGATGGTGTGTCATGGCTTGAAGCCGAATGCGATTACGTATAATGTGCTCCTG TCCGGTCTGTGCCGTGCTGGCAGGATGGGAGAGACGTCAGCCTTGTTGGATGAAATGGCA TCACAAAAGATGGTGCCCGATGGCTTCACATATAGCATTTTATTTGATGGTCTCTCAAGA AATGGTGACTCAAAGGCAATGCTTTCATTGTTTGGAAAATATTTGAAGAATGGAGTGACA ATTGGAGATTACACTTGTAGTATCTTGTTGAATGGCCTGTGTAAGGATGGCAAAGTTTCA ATTGCTGAAGAGGTTCTTCAGTCACTGGTAAATGCAGGGTTAGTCCCAACAAGGGTGATC TATAACACTCTGATCAATGGATATTGCCAGACTGGAGAGCTTGAAGGGGCCTTCTCAACC TTTGGACAGATGAAGTCGCGGCATATCAAGCCAGATCACATTACCTACAATGCACTAATC AATGGTTTGTGTAAGGCTGAAAGAATCACCAATGCACAAGATCTGTTAATGGAGATGCAG GACAATGGAGTGAATCCAACTGTGGAAACTTTCAATACGCTGATTGATGCTTATGGAAGG ACTGGGCAACTTGAGAAATGTTTCATTGTTCTTTCCGAAATGCAAGAGAATGGGCTAAAA CCAAATGTTGTCTCCTATGGTTCAATTGTCAATGCTTTTTGTAAGAATGGAAAAATCCCA GAAGCTGTAGCTATATTGGATGATATGTTTCATAAAGATGTTTTACCAAATGCCCAGGTG TACAATGCTATCATAGATGCATACGTAGAGCATGGTCCCAATGATCAGGCTTTTATTTTA GTTGAGAAGATGAAGAGTAACGGAATATCTCCAAGTATAGTAACCTACAATTTGCTTATA AAAGGCCTTTGCAACCAGTCGCAGATATCTGAAGCTGAGGAAATTATTAACAGCTTAAGT AATCACAGGTTGATACCTGATGCTGTCAGCTATAATACTTTAATATCAGCATGCTGTTAC AGAGGCAATATTGATAAAGCCTTGGATCTTCAGCAAAGAATGCATAAGTATGGCATCAAA TCTACGGTGAGAACATACCATCAACTTATTAGCGGATTAGGTGGTGCAGGGAGATTAAAT GAAATGGAATATCTGTATCAGAAAATGATGCAAAATAATGTTGTACCCAGTAATGCAATA CATAATATCATGGTTGAGGCCTACTCAAAATATGGAAATGAAATTAAGGCAGAAGATCTG AGGAAGGAAATGTTACAGAAAAGGAACAACCATGATGACACATGAGAAAAATAATGGTGA GACGAATAGCTGTATAGCAAGTCCAACATGAAACTTTTGATGTTGATCATAATGAGCCAA TGTTAGAGTGGATTAGTTTGATTGTTTGCCTTATCTTTGTGAACCATTGAAGGATTGAAT TGTCGAATACCATATTCTATTTTTTGTCCCACAAATCCAAAATGGAGCTAGAATAGCATA TATGATGTTTACTAAATCATCCAAGCAACATGAAAGCTGATGATACACATAATGGATGTC AATGTATAGAAAAGTGGGGCAGGTAACCGTAAGTTATATTTCTACAATTTTCATTTTGA