Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0400200-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:19085976:19089497:1 gene:Os08g0400200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 30, SUVH Histone Methyltransferase 10 description:Similar to SET domain protein. (Os08t0400200-00)
Sequence	ATGGACGGGCCGACGCTGGAACTCTCCGAGATGATGCTCCACGCGGCGCAGCCATGGAGA AGCCGATGCACGCAGCGTGACGTTCGCCCGGGCGCGGTTCCTCCTCGTCCCGTCGCTGCG GATGGGCGAGGCGAGGGCACCAGTACAGTGCGAGGGCGCGTGCTGGAGGGGACGACTCGT GGTGGAGGCAGAGGAGGTGGAATGGAGCGTGAGCGCGAGGTGGTGGCGCCGGCGAGAAAT GCGGTGGCCGTCGCCGGTGATTTGGCCACGCACGGCGGCGAGCGGGTTGCTGGCCCCTTG GTGGCGAAGGAGAAGAGAAATGGCGGCGGTGAGTTGGGGACGAAGAGGGGGCTAGAGAAG CGGGCCCCGCTTCCGCCGCCCAAGCGCAGGGTGGTGTCCGCTAAGCGCCAGTTTCCACCA GATTTCGGTAGGGACTCTGCTGTTCCACTCGGCCGCGGCCGGGGCCGTGGTGGTGGTGTT CGTCCGTCGGATGGGGCGCCTGCCCGTGCTGTTCTGGGTGAGAAGGTGGCGTCTGCGGGT AATGGTGATTCAATGGCGAATGTGCATCATCATGCTGTGATGGACACGGTCTTGATGAAA TCTTCACATGCTTCGGATGAGAATCTGGTTGCTTTCAAAGTTGGTTCACCAGAGAATGGT GCAGAAGGGGCAGCAAGGGGAAAGGGAGCACACAATGGTGAATTGCTGGGAAAGAGGGAA GTGTTGGCTCAAGCTGTGAATTTGCTTCCCATGAGGAGGACTGTATCTGCGACGCACCGC TTCACTGCTGGGTGTGGGAGGGACGCTGCAGCTCCACTTGCTCGCAGAGAAGAGGGTAAG GTGGGTTCAGGTTTGGAAGTCATGCCTGTTGATGTTGGTGGGGGTGTGTCAAAGGAGGTG ATGGCTACGGATGGCAGTAAACATTCGGTTAACCAGTGTACGGCGAACATTGTTGGAGCT GTCGGTGTTTTGGATGGAACAGTACAGTACCAGGAATTGGAGGAGGGTGAGGTGGCTGAT GAGGCATACTGTGATGTAGAGTCACAAAAAGTTGTTGGTTGTGATTCTTTTGATGATTCT GCAGGTGAAAGACATGAGGGTGTTGTTCCTGTAACGTTTGCTGTTACTGAAGTTTTGACA AGTCACGCTTATGATGAGATGATGCAAATTAAGGCATTGCAAGAAGGGGGCAGTGATGCT GCGCAGGAAACTGAACATGACTTGCCAATGGGAGGCAAATGTGAAACTATCTTACCTGAT GCTTCTCCTAAATGTTCGTTTGGTGGTCCTTCAAATGAAATTGTCCACGGCAAGAGAGTG TTGGGGAGTCATGGCATGAAAGGGGAAGTTCCCAGTCTTGCAATTGAAGATCATGGTGGC ATTGCTCAAATTGACCAAGAACTGGAGGACGTTGAGATGACTACAGGGGAATACCGTGTT CAGGATGCTCAAATTGCCACCCATGTTATCCCACACGAGTCTACAACTGGTAGACATGAG GGGGGGCTTTGTGCATCTGCAGCTGCTGAAGATGTTAAGGTGATGAACAAATACAAAGGG ACCTTACCCAAAGGTGCTGCTAAATCATCGATGAATATTGCAACAGGAGTATTTGGTGAT GGTATCATGAGAAGTAAGATACTATCAACAGCTAGAAAAGTAGTCAAGCCACCTGTCAGA GCAAGCCATAAGCCTCCATTGAACACTCTGCATAGACCCTTCTCCACAAATAGTGCTTCA TTTGGTCATAAGAAGTTGAAGGTAAAACGTCCAGATCAAAGTAAAGATATTCCTATGAAG ATTGCCTCTACATCTGGATTGGCGGGCAAGGACAACCTTATCGATGAAAAGGCTTTGAGC TTGGAAGATGATGATATTTTGAAGGCACTAGTTGTTCATGATGGAAAGCTTGAGGTGTAT CTCAATGTTCCCTCATGCGTTCAGCTTCATAGGCAACATGGAAGTGGGAATGCTGATGAT AGGAGCAAAATCAGGATGTTGTGCAGGAGGTTTCAGTTTATATGCAGGGCTCTCTTACAT GCCGTCGAACAGGGTTCATTGAAGATTCGAAGAGTTGACCTTGCAGCTGATAAAATCATC AGGAAATTGCCAGGCTTTACCAAACCTGGACCTACTGTGGGAAATGTTAATGGAGTGGAA GTTGGTGACGAATTTATGTACAGAGTTGAGCTAGCCCTTGTTGGTCTCCATCGCCCATAC CAGGGAGGAATTGATACCACCGATTATAATGGAGTGCTTGTTGCAATAAGCATCGTTTGT TCTGGAGGTTATCCTGATGAATTGTCAAGCTCAGGTGAACTAATATACACTGGTTCTGGA GGAAAGCCTGCTGGTAAGAAGAAAGATGAGGATCAAAAGCTAGAGAGGGGGAACCTTGCC TTGAAGAATTGCATCGAGACAAAGACACCTGTCCGAGTGATTCATGGATTCAAAGGTCAA AATAGAGAGGACAACAGTCATTCAAGAGCTAAACAAATCCTAACATTTACTTATGATGGG TTGTACCTTGTGGTGGATTGCTGGACAGAAGGACTAAAAGGTTCAAGGATCTTCAAATAC AAATTACAAAGGATTCCTGGACAACCAGAACTTCCTCTGCACATAGCTAAAGGGCTGAGA AGGTCTCTTTCACGTCCAGGCCTCTGCATAGCTGATATATCTCAAGGGAAAGAAATGGAT CCCATCTGTGTGATCAATGATGTTAGTAATGTCCATCCAACATCTTTTCAGTACATCTCT AGAATCAAGTACCCGTCATGGCTTACAAAAAGACATCCTCAGCATCATGGTTGCGATTGC TCAGATGGCTGCATAGATTCTACTAAGTGCTTTTGTGCTGTGAAGAATGGAGGAAAAATC CCATTCAACTCCAATGGTGCAATTGTCCATGATAAACCCCTCATTTTTGAGTGTGGTCCA TCCTGTAGGTGCCATTCTTCATGCCACAACAGGGTAAGTCAGAAGGGTATGAAAATCCAC CTGGAAGTTTTCAGGACAGCCAATAAAGGTTGGGGTGTAAGATCCCTAAGGTCCATCTCT TCTGGCAGCTTTATATGTGAGTATGTTGGTATCCTGTTGACTGACAAGGAAGCTGACAAG AGAACAAACGATGAATACTTGTTTGATATAAGCCATAATTGTGATGATGAGGATTGCTCC AAGGGGAGGCCATCAACTATTTCTAGTCTAAACTCTTCTGGTGGTTGCTCTCAGACCATG GAAGATGTGTGCTTCACGATAGATGCGTCTGAGTACGGAAATATTGGAAGATTTATCAAC CATAGTTGCTCACCTAACCTCTATGCACAAAATGTGCTTTGGGATCATGATGACCAAAGG GTGCCCCATATCATGTTCTTTGCTGCAGAGAACATTCCTCCACTCCAAGAGCTCACTTAT GACTATAACTATAAAATAGGTGAAGTCCGCGACCTGAATGGCAGAGTAAAAGTTAAAGAT TGCCATTGTGGTTCTCCACAGTGCTGCGGCAGGCTCTATTAG

Peptide Sequence

PEP ID	Os08t0400200-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:19085976:19089497:1 gene:Os08g0400200 transcript:Os08t0400200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 30, SUVH Histone Methyltransferase 10 description:Similar to SET domain protein. (Os08t0400200-00)
Sequence	MDGPTLELSEMMLHAAQPWRSRCTQRDVRPGAVPPRPVAADGRGEGTSTVRGRVLEGTTR GGGRGGGMEREREVVAPARNAVAVAGDLATHGGERVAGPLVAKEKRNGGGELGTKRGLEK RAPLPPPKRRVVSAKRQFPPDFGRDSAVPLGRGRGRGGGVRPSDGAPARAVLGEKVASAG NGDSMANVHHHAVMDTVLMKSSHASDENLVAFKVGSPENGAEGAARGKGAHNGELLGKRE VLAQAVNLLPMRRTVSATHRFTAGCGRDAAAPLARREEGKVGSGLEVMPVDVGGGVSKEV MATDGSKHSVNQCTANIVGAVGVLDGTVQYQELEEGEVADEAYCDVESQKVVGCDSFDDS AGERHEGVVPVTFAVTEVLTSHAYDEMMQIKALQEGGSDAAQETEHDLPMGGKCETILPD ASPKCSFGGPSNEIVHGKRVLGSHGMKGEVPSLAIEDHGGIAQIDQELEDVEMTTGEYRV QDAQIATHVIPHESTTGRHEGGLCASAAAEDVKVMNKYKGTLPKGAAKSSMNIATGVFGD GIMRSKILSTARKVVKPPVRASHKPPLNTLHRPFSTNSASFGHKKLKVKRPDQSKDIPMK IASTSGLAGKDNLIDEKALSLEDDDILKALVVHDGKLEVYLNVPSCVQLHRQHGSGNADD RSKIRMLCRRFQFICRALLHAVEQGSLKIRRVDLAADKIIRKLPGFTKPGPTVGNVNGVE VGDEFMYRVELALVGLHRPYQGGIDTTDYNGVLVAISIVCSGGYPDELSSSGELIYTGSG GKPAGKKKDEDQKLERGNLALKNCIETKTPVRVIHGFKGQNREDNSHSRAKQILTFTYDG LYLVVDCWTEGLKGSRIFKYKLQRIPGQPELPLHIAKGLRRSLSRPGLCIADISQGKEMD PICVINDVSNVHPTSFQYISRIKYPSWLTKRHPQHHGCDCSDGCIDSTKCFCAVKNGGKI PFNSNGAIVHDKPLIFECGPSCRCHSSCHNRVSQKGMKIHLEVFRTANKGWGVRSLRSIS SGSFICEYVGILLTDKEADKRTNDEYLFDISHNCDDEDCSKGRPSTISSLNSSGGCSQTM EDVCFTIDASEYGNIGRFINHSCSPNLYAQNVLWDHDDQRVPHIMFFAAENIPPLQELTY DYNYKIGEVRDLNGRVKVKDCHCGSPQCCGRLY

Transcript Sequence

Transcript ID	Os08t0400200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19085976:19089497:1 gene:Os08g0400200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 30, SUVH Histone Methyltransferase 10 description:Similar to SET domain protein. (Os08t0400200-00)
Sequence	ATGGACGGGCCGACGCTGGAACTCTCCGAGATGATGCTCCACGCGGCGCAGCCATGGAGA AGCCGATGCACGCAGCGTGACGTTCGCCCGGGCGCGGTTCCTCCTCGTCCCGTCGCTGCG GATGGGCGAGGCGAGGGCACCAGTACAGTGCGAGGGCGCGTGCTGGAGGGGACGACTCGT GGTGGAGGCAGAGGAGGTGGAATGGAGCGTGAGCGCGAGGTGGTGGCGCCGGCGAGAAAT GCGGTGGCCGTCGCCGGTGATTTGGCCACGCACGGCGGCGAGCGGGTTGCTGGCCCCTTG GTGGCGAAGGAGAAGAGAAATGGCGGCGGTGAGTTGGGGACGAAGAGGGGGCTAGAGAAG CGGGCCCCGCTTCCGCCGCCCAAGCGCAGGGTGGTGTCCGCTAAGCGCCAGTTTCCACCA GATTTCGGTAGGGACTCTGCTGTTCCACTCGGCCGCGGCCGGGGCCGTGGTGGTGGTGTT CGTCCGTCGGATGGGGCGCCTGCCCGTGCTGTTCTGGGTGAGAAGGTGGCGTCTGCGGGT AATGGTGATTCAATGGCGAATGTGCATCATCATGCTGTGATGGACACGGTCTTGATGAAA TCTTCACATGCTTCGGATGAGAATCTGGTTGCTTTCAAAGTTGGTTCACCAGAGAATGGT GCAGAAGGGGCAGCAAGGGGAAAGGGAGCACACAATGGTGAATTGCTGGGAAAGAGGGAA GTGTTGGCTCAAGCTGTGAATTTGCTTCCCATGAGGAGGACTGTATCTGCGACGCACCGC TTCACTGCTGGGTGTGGGAGGGACGCTGCAGCTCCACTTGCTCGCAGAGAAGAGGGTAAG GTGGGTTCAGGTTTGGAAGTCATGCCTGTTGATGTTGGTGGGGGTGTGTCAAAGGAGGTG ATGGCTACGGATGGCAGTAAACATTCGGTTAACCAGTGTACGGCGAACATTGTTGGAGCT GTCGGTGTTTTGGATGGAACAGTACAGTACCAGGAATTGGAGGAGGGTGAGGTGGCTGAT GAGGCATACTGTGATGTAGAGTCACAAAAAGTTGTTGGTTGTGATTCTTTTGATGATTCT GCAGGTGAAAGACATGAGGGTGTTGTTCCTGTAACGTTTGCTGTTACTGAAGTTTTGACA AGTCACGCTTATGATGAGATGATGCAAATTAAGGCATTGCAAGAAGGGGGCAGTGATGCT GCGCAGGAAACTGAACATGACTTGCCAATGGGAGGCAAATGTGAAACTATCTTACCTGAT GCTTCTCCTAAATGTTCGTTTGGTGGTCCTTCAAATGAAATTGTCCACGGCAAGAGAGTG TTGGGGAGTCATGGCATGAAAGGGGAAGTTCCCAGTCTTGCAATTGAAGATCATGGTGGC ATTGCTCAAATTGACCAAGAACTGGAGGACGTTGAGATGACTACAGGGGAATACCGTGTT CAGGATGCTCAAATTGCCACCCATGTTATCCCACACGAGTCTACAACTGGTAGACATGAG GGGGGGCTTTGTGCATCTGCAGCTGCTGAAGATGTTAAGGTGATGAACAAATACAAAGGG ACCTTACCCAAAGGTGCTGCTAAATCATCGATGAATATTGCAACAGGAGTATTTGGTGAT GGTATCATGAGAAGTAAGATACTATCAACAGCTAGAAAAGTAGTCAAGCCACCTGTCAGA GCAAGCCATAAGCCTCCATTGAACACTCTGCATAGACCCTTCTCCACAAATAGTGCTTCA TTTGGTCATAAGAAGTTGAAGGTAAAACGTCCAGATCAAAGTAAAGATATTCCTATGAAG ATTGCCTCTACATCTGGATTGGCGGGCAAGGACAACCTTATCGATGAAAAGGCTTTGAGC TTGGAAGATGATGATATTTTGAAGGCACTAGTTGTTCATGATGGAAAGCTTGAGGTGTAT CTCAATGTTCCCTCATGCGTTCAGCTTCATAGGCAACATGGAAGTGGGAATGCTGATGAT AGGAGCAAAATCAGGATGTTGTGCAGGAGGTTTCAGTTTATATGCAGGGCTCTCTTACAT GCCGTCGAACAGGGTTCATTGAAGATTCGAAGAGTTGACCTTGCAGCTGATAAAATCATC AGGAAATTGCCAGGCTTTACCAAACCTGGACCTACTGTGGGAAATGTTAATGGAGTGGAA GTTGGTGACGAATTTATGTACAGAGTTGAGCTAGCCCTTGTTGGTCTCCATCGCCCATAC CAGGGAGGAATTGATACCACCGATTATAATGGAGTGCTTGTTGCAATAAGCATCGTTTGT TCTGGAGGTTATCCTGATGAATTGTCAAGCTCAGGTGAACTAATATACACTGGTTCTGGA GGAAAGCCTGCTGGTAAGAAGAAAGATGAGGATCAAAAGCTAGAGAGGGGGAACCTTGCC TTGAAGAATTGCATCGAGACAAAGACACCTGTCCGAGTGATTCATGGATTCAAAGGTCAA AATAGAGAGGACAACAGTCATTCAAGAGCTAAACAAATCCTAACATTTACTTATGATGGG TTGTACCTTGTGGTGGATTGCTGGACAGAAGGACTAAAAGGTTCAAGGATCTTCAAATAC AAATTACAAAGGATTCCTGGACAACCAGAACTTCCTCTGCACATAGCTAAAGGGCTGAGA AGGTCTCTTTCACGTCCAGGCCTCTGCATAGCTGATATATCTCAAGGGAAAGAAATGGAT CCCATCTGTGTGATCAATGATGTTAGTAATGTCCATCCAACATCTTTTCAGTACATCTCT AGAATCAAGTACCCGTCATGGCTTACAAAAAGACATCCTCAGCATCATGGTTGCGATTGC TCAGATGGCTGCATAGATTCTACTAAGTGCTTTTGTGCTGTGAAGAATGGAGGAAAAATC CCATTCAACTCCAATGGTGCAATTGTCCATGATAAACCCCTCATTTTTGAGTGTGGTCCA TCCTGTAGGTGCCATTCTTCATGCCACAACAGGGTAAGTCAGAAGGGTATGAAAATCCAC CTGGAAGTTTTCAGGACAGCCAATAAAGGTTGGGGTGTAAGATCCCTAAGGTCCATCTCT TCTGGCAGCTTTATATGTGAGTATGTTGGTATCCTGTTGACTGACAAGGAAGCTGACAAG AGAACAAACGATGAATACTTGTTTGATATAAGCCATAATTGTGATGATGAGGATTGCTCC AAGGGGAGGCCATCAACTATTTCTAGTCTAAACTCTTCTGGTGGTTGCTCTCAGACCATG GAAGATGTGTGCTTCACGATAGATGCGTCTGAGTACGGAAATATTGGAAGATTTATCAAC CATAGTTGCTCACCTAACCTCTATGCACAAAATGTGCTTTGGGATCATGATGACCAAAGG GTGCCCCATATCATGTTCTTTGCTGCAGAGAACATTCCTCCACTCCAAGAGCTCACTTAT GACTATAACTATAAAATAGGTGAAGTCCGCGACCTGAATGGCAGAGTAAAAGTTAAAGAT TGCCATTGTGGTTCTCCACAGTGCTGCGGCAGGCTCTATTAG