Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0398700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:19021817:19031571:1 gene:Os08g0398700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M1, membrane alanine aminopeptidase family protein. (Os08t0398700-01);Similar to APM1 (AMINOPEPTIDASE M1). (Os08t0398700-02)
Sequence	ATGGCGGCCTCGCCGGAGCAGTTCCGGGGCCAGGCGCGGCTCCCGCGGTGCGCCTCCCCG CTCAGCTACGACCTCCGCCTCCGCCCCGACCTCGCCGCCTGCGCCTTCTCCGGCTCCGCC GCCGTCGCCGTCGCCGTCTCCGCCCCGACCCGATTCCTCGTCCTCAACGCCGCCGAGCTC GCCGTCGACGGATCCTCCGTCCGCTTCCAGGATTTGGTGCCTTCCGAGGTGGTGCAGTTC GAGGAGGACGAGATCGTGGTCATCGGGTTCGGCCAGGATCTGCCGATCGGCGAGGGCGTG CTCAAGATGGACTTCACCGGGACGCTCAACGATCAGATGAGAGGCTTCTACAGGAGCAAG TATGAGTACAAGGGGGAGTCAAGAAATATGGCAGTTACACAGTTCGAAGCTGCTGATGCA AGACGATGTTTTCCATGCTGGGATGAACCTGCATTTAAGGCTAAGTTCAAGCTAACACTG GAAGTTCCATCAGAGTTGGTAGCACTGTCCAACATGCCAGTAATTAAGGAGACAGTTCAT GGACCTCTCAAGACCGTCTATTATGAGGAATCGCCACTTATGTCAACTTATCTAGTGGCT ATAGTTGTTGGTTTATTTGATTACATAGAGGGCTCAACATTAGAAGGCACCAAAGTTCGT GTGTATACTCAAGTTGGCAAGAGTAACCAAGGAAAGTTTGCACTAGATGTTGCAGTGAAG TCACTGGATTTATTCAAAGATTATTTTGCCACTCCTTACCCGCTACCGAAGTTGGATATG GTTGCTATTCCTGATTTTGCTGCTGGAGCTATGGAGAACTATGGGTTGGTCACTTACCGA GAAACAGCTTTACTTTATGATGAGCTGTTATCCTCAGCATCCAATAAACAACAGGTTGCA ATCACTGTTGCACATGAATTGGCTCATCAATGGTTTGGCAATCTTGTAACCATGGAGTGG TGGACTCACTTGTGGCTAAATGAGGGTTTTGCTTCCTGGGTGAGTTATTTGGCTGTGGAA GCATTATTTCCAGAATGGAATAACTGGACACAATTTCTTGATGAGACGACCTCTGGTCTC AGACTGGATGCACTTGCAGAGTCTCATCCTATTGAGGTTGACATAAACCATGCCTCTGAA ATTGATGCAATTTTTGATTCCATAAGCTATGATAAGGGCGCTTCCGTCATTCGCATGCTG CAAAGTTACCTTGGTGCAGAGCGTTTTCAGAAAGCTTTGGCATCATATATAAAGAAGTAT GCTTACTCGAATGCCAAAACAGAAGATCTATGGGCTGTTCTTGAGGAGGAATCTGGGGAA CCTGTTAAGGATTTGATGACTACATGGACTAAGCAACAAGGATACCCTGTTATTTATGCA AAACTAGATGGACATGATTTGCACCTTGAACAGGCACAGTTTCTATCGGACGGATCCTCT GGTCCAGGCTTGTGGATTGTTCCTATAACATCATGTTGTGGCTCATATGATGCACAGAAA AAGTTTCTCTTGAAGGGCAAGACTGATAAGGTCCATATAGACCTCACTGCCTCCCAAAAT GCCGGAGGAGAGAAGGGTGAAAACTGTTGGATCAAATTGAACGTTGACCAAACTGGATTT TATAGAGTGAAGTATGATGATGAACTTGCAGCTGGACTTGAAAAGGCAATCAAAGCCAAT AAGCTCTCTTTAATGGATAAGATTGGTATTGTGGAAGATTCATACTCCCTTTCTGTGGCT CGCAAGCAAACACTGACATCCTTGCTTCGCCTGCTGAATGCTTATCGCAATGAGTCTGAT TACACTGTGCTTTCACATGTAACCTCTGTATGCTTAGGCATTGATAAAATATCAGTTGAT GCTACTCCTGAATTGTCCAGAGATATCAAACAGCTTTTGATCAATCTTCTTCTATCAGCT GCCAAAACACTAGGCTGGGATCCCAAGGAGGGCGAGAGCCATCTTGATGTAATGCTTAGA TCATTGCTCTTGATTGCCCTTGTCAAACTTGGACATGATGAGACTATAAATGAGGGAGTT AGGCGGTTCCATATCTTCATAAAAGACCGCAAAACTAACATTCTTCCCCCAGACACTAGA AAGGCTTCATATCTTGCTGTGATGCGGACTGTTACTACCTCCAGCAGAGCTGGTTATGAT GCCCTCCTGAAAATCTACAGAGAAACAGCTGAAGCTCAGGAGAAGTCACGCATCTTAGGT TCATTGTCTTCATGCCTGGATAAGGATATTGTTCTTGAGGCACTAAACTTCATGCTTACC GATGAGGTACGGAATCAAGATGCATTTTATGTCCTTGGTGGTATCAGCTTAGAAGGACGA GAAGTTGCATGGGCCTGGTTGAAGGAAAACTGGGATCATGTCTTGAAGACCTGGCCATCA AGTTCACTCATATCGGACTTCGTCAAATCTACTGTTTCACGGTTCACCACAGAGGAGAAG GCTGCTGAAGTTTCCGAGTTCTTCGCCGGTAAAACCAAACCATCGTTCGAGCGTGCACTG AAGCAGAGCCTCGAGAGGGTCCGTATCAGCGCGAGATGGATCGAGAGCATCAGGAGCGAG CCTAACCTTGCTCAGACAGTGAACGAGCTGCTGCAGCACGACATGTAG

Peptide Sequence

PEP ID	Os08t0398700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:19021817:19031571:1 gene:Os08g0398700 transcript:Os08t0398700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M1, membrane alanine aminopeptidase family protein. (Os08t0398700-01);Similar to APM1 (AMINOPEPTIDASE M1). (Os08t0398700-02)
Sequence	MAASPEQFRGQARLPRCASPLSYDLRLRPDLAACAFSGSAAVAVAVSAPTRFLVLNAAEL AVDGSSVRFQDLVPSEVVQFEEDEIVVIGFGQDLPIGEGVLKMDFTGTLNDQMRGFYRSK YEYKGESRNMAVTQFEAADARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPVIKETVH GPLKTVYYEESPLMSTYLVAIVVGLFDYIEGSTLEGTKVRVYTQVGKSNQGKFALDVAVK SLDLFKDYFATPYPLPKLDMVAIPDFAAGAMENYGLVTYRETALLYDELLSSASNKQQVA ITVAHELAHQWFGNLVTMEWWTHLWLNEGFASWVSYLAVEALFPEWNNWTQFLDETTSGL RLDALAESHPIEVDINHASEIDAIFDSISYDKGASVIRMLQSYLGAERFQKALASYIKKY AYSNAKTEDLWAVLEEESGEPVKDLMTTWTKQQGYPVIYAKLDGHDLHLEQAQFLSDGSS GPGLWIVPITSCCGSYDAQKKFLLKGKTDKVHIDLTASQNAGGEKGENCWIKLNVDQTGF YRVKYDDELAAGLEKAIKANKLSLMDKIGIVEDSYSLSVARKQTLTSLLRLLNAYRNESD YTVLSHVTSVCLGIDKISVDATPELSRDIKQLLINLLLSAAKTLGWDPKEGESHLDVMLR SLLLIALVKLGHDETINEGVRRFHIFIKDRKTNILPPDTRKASYLAVMRTVTTSSRAGYD ALLKIYRETAEAQEKSRILGSLSSCLDKDIVLEALNFMLTDEVRNQDAFYVLGGISLEGR EVAWAWLKENWDHVLKTWPSSSLISDFVKSTVSRFTTEEKAAEVSEFFAGKTKPSFERAL KQSLERVRISARWIESIRSEPNLAQTVNELLQHDM

Transcript Sequence

Transcript ID	Os08t0398700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:19021817:19031571:1 gene:Os08g0398700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M1, membrane alanine aminopeptidase family protein. (Os08t0398700-01);Similar to APM1 (AMINOPEPTIDASE M1). (Os08t0398700-02)
Sequence	CTTCTTCCCTCCCTCCCTTCCCCACTACTCTACTCCCCCACTCGCCGTCGCAACTCCCGC CGCCGCACCGCCGCACCGCCACACCGCCCCCGCCGCAAATGGCGGCCTCGCCGGAGCAGT TCCGGGGCCAGGCGCGGCTCCCGCGGTGCGCCTCCCCGCTCAGCTACGACCTCCGCCTCC GCCCCGACCTCGCCGCCTGCGCCTTCTCCGGCTCCGCCGCCGTCGCCGTCGCCGTCTCCG CCCCGACCCGATTCCTCGTCCTCAACGCCGCCGAGCTCGCCGTCGACGGATCCTCCGTCC GCTTCCAGGATTTGGTGCCTTCCGAGGTGGTGCAGTTCGAGGAGGACGAGATCGTGGTCA TCGGGTTCGGCCAGGATCTGCCGATCGGCGAGGGCGTGCTCAAGATGGACTTCACCGGGA CGCTCAACGATCAGATGAGAGGCTTCTACAGGAGCAAGTATGAGTACAAGGGGGAGTCAA GAAATATGGCAGTTACACAGTTCGAAGCTGCTGATGCAAGACGATGTTTTCCATGCTGGG ATGAACCTGCATTTAAGGCTAAGTTCAAGCTAACACTGGAAGTTCCATCAGAGTTGGTAG CACTGTCCAACATGCCAGTAATTAAGGAGACAGTTCATGGACCTCTCAAGACCGTCTATT ATGAGGAATCGCCACTTATGTCAACTTATCTAGTGGCTATAGTTGTTGGTTTATTTGATT ACATAGAGGGCTCAACATTAGAAGGCACCAAAGTTCGTGTGTATACTCAAGTTGGCAAGA GTAACCAAGGAAAGTTTGCACTAGATGTTGCAGTGAAGTCACTGGATTTATTCAAAGATT ATTTTGCCACTCCTTACCCGCTACCGAAGTTGGATATGGTTGCTATTCCTGATTTTGCTG CTGGAGCTATGGAGAACTATGGGTTGGTCACTTACCGAGAAACAGCTTTACTTTATGATG AGCTGTTATCCTCAGCATCCAATAAACAACAGGTTGCAATCACTGTTGCACATGAATTGG CTCATCAATGGTTTGGCAATCTTGTAACCATGGAGTGGTGGACTCACTTGTGGCTAAATG AGGGTTTTGCTTCCTGGGTGAGTTATTTGGCTGTGGAAGCATTATTTCCAGAATGGAATA ACTGGACACAATTTCTTGATGAGACGACCTCTGGTCTCAGACTGGATGCACTTGCAGAGT CTCATCCTATTGAGGTTGACATAAACCATGCCTCTGAAATTGATGCAATTTTTGATTCCA TAAGCTATGATAAGGGCGCTTCCGTCATTCGCATGCTGCAAAGTTACCTTGGTGCAGAGC GTTTTCAGAAAGCTTTGGCATCATATATAAAGAAGTATGCTTACTCGAATGCCAAAACAG AAGATCTATGGGCTGTTCTTGAGGAGGAATCTGGGGAACCTGTTAAGGATTTGATGACTA CATGGACTAAGCAACAAGGATACCCTGTTATTTATGCAAAACTAGATGGACATGATTTGC ACCTTGAACAGGCACAGTTTCTATCGGACGGATCCTCTGGTCCAGGCTTGTGGATTGTTC CTATAACATCATGTTGTGGCTCATATGATGCACAGAAAAAGTTTCTCTTGAAGGGCAAGA CTGATAAGGTCCATATAGACCTCACTGCCTCCCAAAATGCCGGAGGAGAGAAGGGTGAAA ACTGTTGGATCAAATTGAACGTTGACCAAACTGGATTTTATAGAGTGAAGTATGATGATG AACTTGCAGCTGGACTTGAAAAGGCAATCAAAGCCAATAAGCTCTCTTTAATGGATAAGA TTGGTATTGTGGAAGATTCATACTCCCTTTCTGTGGCTCGCAAGCAAACACTGACATCCT TGCTTCGCCTGCTGAATGCTTATCGCAATGAGTCTGATTACACTGTGCTTTCACATGTAA CCTCTGTATGCTTAGGCATTGATAAAATATCAGTTGATGCTACTCCTGAATTGTCCAGAG ATATCAAACAGCTTTTGATCAATCTTCTTCTATCAGCTGCCAAAACACTAGGCTGGGATC CCAAGGAGGGCGAGAGCCATCTTGATGTAATGCTTAGATCATTGCTCTTGATTGCCCTTG TCAAACTTGGACATGATGAGACTATAAATGAGGGAGTTAGGCGGTTCCATATCTTCATAA AAGACCGCAAAACTAACATTCTTCCCCCAGACACTAGAAAGGCTTCATATCTTGCTGTGA TGCGGACTGTTACTACCTCCAGCAGAGCTGGTTATGATGCCCTCCTGAAAATCTACAGAG AAACAGCTGAAGCTCAGGAGAAGTCACGCATCTTAGGTTCATTGTCTTCATGCCTGGATA AGGATATTGTTCTTGAGGCACTAAACTTCATGCTTACCGATGAGGTACGGAATCAAGATG CATTTTATGTCCTTGGTGGTATCAGCTTAGAAGGACGAGAAGTTGCATGGGCCTGGTTGA AGGAAAACTGGGATCATGTCTTGAAGACCTGGCCATCAAGTTCACTCATATCGGACTTCG TCAAATCTACTGTTTCACGGTTCACCACAGAGGAGAAGGCTGCTGAAGTTTCCGAGTTCT TCGCCGGTAAAACCAAACCATCGTTCGAGCGTGCACTGAAGCAGAGCCTCGAGAGGGTCC GTATCAGCGCGAGATGGATCGAGAGCATCAGGAGCGAGCCTAACCTTGCTCAGACAGTGA ACGAGCTGCTGCAGCACGACATGTAGCCTTCCTTTTGGGCTAAAGCTATTTGTACGCTCA TGGAGGATCGTACAACACAAATGTTCTTCGAAAGGTTGTGCCGGGTGTGGCTGTTCTAAC GATCATATTTTAAAGTTTGTTTAGTTCTATCTCTATCTTTTGCTTGGGCAATCGAAAAGA CATGTTTGGTCCTCGCAGCGAGGTGTGCTTGGTTCAGCTTTTGTCAGGACTGGCAATGAA AATCACAAATCTTGTACAGAACTGTTTCATTTCT