Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0398300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:18993292:18998956:1 gene:Os08g0398300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER A FAMILY MEMBER 4 description:ABC transporter-like domain containing protein. (Os08t0398300-01)
Sequence	ATGGCAGACACCTCCTCCTCGTCGTCGTCGAGGGGCGCCGCCGGATTCGCCACGCAGGCC AATGCCCTCCTCCGCAAGAACCTCTGCTTCCAGAGGAGGAACATGAAGACGAACGCGTGC ATCACGGTGTTCCCGGTGTTCCTGTGCGTGATCCTCGTGGTGCTCCAGGGGGTGATCAAC CACGAGATCAACAAGCCCAAGTACCAGTGCGGCTGCGCCTGCGTGGACGCCGCGCCGGAC GGGACCTGCCGGAGGACGGAGTGCGGCGTCGAGCACTCCACGCTGGACCAGGTGGGGAGC TGCCCGATCAAGAGCCCGACGCCATGGCCGGCCTTGGTCCAGGTCCCCCGCCCCGAGTCC CGGGCCGTCAGGATCGCCTCCCAGCCGTTCGACGGTTTGCCTGACCCGACCTGCAGGGAC ACAGGGTCTTGCCCTGCCTCTGTCCTTGTCACCGGAATGAACCGCTCGCTTGCTCAAAGT CTTTGGGGTGGATTGTTCCCTGCTGTGCCTCCCTCTCTGAATTTCACGGATTATCTTGAC GCGTTCTCCAAGATTGTTGCTGGGTCAGACACATGGACATGGACAACGCAGTTCATAGAG CCGGTATTTACCCCAGGGCATTCTTTATATGTGGTCCAGCCTCAGTGTTCGTCCAATTTA TCACGAACAATTTCTAACAAAGCTGGACCTGTACCCATTCAACTCAATATAGACTGCGTT CAAGGCTTATCATTATGGCGTGAAAGTGCATCACAAATTAATAATGAACTATTTAGAGGT TATAGACAGCAAGGTGGAGGAGGTGGAGGAGGAAAGACAAATGAATTTATTGCAGGCTAT GATTTTCTGAACACAAACAACAATGGTCTTGAAATAAACATTTGGTACAACTCTACATAT AACAACAACACTGCATATGACGTCATCTCATTGCTACGAGTTCCACGCTTGGTTAACACG GCATCCAATGCATACATGAAATTTCTTAAAGGAAGTGGAGTGGAGATGCTGCTTGAATAC GTTAAAGATATGCCAAAAGTAGGAACCAAACCAAAATTTGATCTCTCTTCTCTTCTTGGT GCTCTGTTCTTCACCTGGATCATTGAACTACTTTTTCCAGTTATCTTAACATATCTCGTG TACGAGAAGCAACAGAAGCTGAAAATTATGATGAAGATGCACGGCTTGAAGGATGAGCCT TACTGGATGATATCATATTCTTACTTCTTTGCTCTATCAGCTGTCTATATGATAGTGTTT GTGGTATTTGGATCCTTGATAGGTTTAAATTTCTTTAAAACAAATAACTACGGCATTCAG TTTGTTTTCTACTTCATCTACATAAATCTTCAGATCGCACTTGCATTTTTCGTTGCGGCC TTCTTTTCTTCTGTAAAAACAGCCACAGTGGTTGGTTATATATATGTATTTGGTTCTGGC TTACTAGGGGCATTTCTTCTGAGGTTTTTTGTGGAGTCTACTAGTTTTCCGAAGGGTTGG ATAGTAGTCATGGAAATCATCCCTGGATTTTCGCTGTACCGAGGGTTATATGAGCTTGGT CAATATGCATTCTCTGGAAATGCAATGGGAACAAATGGTATGGAGTGGACTAATCTGAGG GACTCTGAGAATGGAATGCGCAATGTCTTGATTATCATGGTTGTCGAATGGGCTATTCTA CTCCCATTAGCATTTTATTTGGATAAAATCTCATCATTGGGTAGTGGAGCCCGTAAAACA CCCATGTTCTTCTTGAAACGTTTCAAAAATCGTGCTGTATCACTGCGGAGGAGCTTTGGG AGACAAGGGTCTAAAGTAGTTGTTGAAATGGACAACCCTGATGTTTCCCAAGAAAGAGAG GTAGTCGAGCAACTTCTGCTGGAACCAAATGCAAGCCAAGCAATCATATGCGACAACCTG AAGAAGGTTTACCATGGAAAGGATGGAAACCCGGACAAACTTGCAGTTCGAGGGTTGTCT CTTGCCCTCCCTAAAGGCCAATGTTTTGGTATGCTTGGCCCGAATGGAGCTGGGAAAACA TCATTTATCAGCATGATGATTGGGCTCATTCCACCCACATCTGGCACAGCATTAGTCCAT GGGATGGACATAAACACTGATATGGATAGCATCTACACAAATATGGGTGTATGCCCACAA CACGACCTACTTTGGGAAACATTGACTGGAAAAGAGCATCTATTGTTTTATGGGAGATTA AAGAATCTTAAAGGCGCTGAATTAGAGAAGGCAGTTGATGACTCCCTGAAGAATGTTAAC CTGTTTCACGGTGGTGTTGGAAATAAGCAAGTGGGGAAGTACAGTGGTGGCATGAAACGA AGGCTTAGTGTCGCAATCTCATTGATTGGGGACCCCAAGGTTGTTTTCATGGATGAGCCT AGCACTGGACTAGATCCAGCATCAAGAAATAACTTGTGGAATGTTGTGAAGGAGGCAAAG AAAAATCGTGCTATCATTCTTACAACACATTCAATGGAAGAGGCAGAGGTGCTATGTGAT AGACTCGGTATTTTTGTAGATGGTGGTTTTCAATGCCTTGGGAATCCAAAGGAGCTGAAA GCTAGATATGGTGGCACATATGTGTTCACTATGACAACATCTTCAGAACATGAACAGGAG GTCAAACAGCTGGTTCAGCATTTGTCACCAAGTGCAAACAGGATATATCACATATCAGGG ACGCAGAAATTTGAGCTGCCAAAACAGGAGGTGAAGATAGCAGACGTTTTCCATGCAGTT GAGAAGGCAAAAAGACAGTTCAGCATACACGCTTGGGGCCTCGTCGACACCACCTTGGAG GATGTCTTCATCAAGGTTGCCAAAGGAGCACAAGGAGTCAATGTGATCGCGTAA

Peptide Sequence

PEP ID	Os08t0398300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:18993292:18998956:1 gene:Os08g0398300 transcript:Os08t0398300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER A FAMILY MEMBER 4 description:ABC transporter-like domain containing protein. (Os08t0398300-01)
Sequence	MADTSSSSSSRGAAGFATQANALLRKNLCFQRRNMKTNACITVFPVFLCVILVVLQGVIN HEINKPKYQCGCACVDAAPDGTCRRTECGVEHSTLDQVGSCPIKSPTPWPALVQVPRPES RAVRIASQPFDGLPDPTCRDTGSCPASVLVTGMNRSLAQSLWGGLFPAVPPSLNFTDYLD AFSKIVAGSDTWTWTTQFIEPVFTPGHSLYVVQPQCSSNLSRTISNKAGPVPIQLNIDCV QGLSLWRESASQINNELFRGYRQQGGGGGGGKTNEFIAGYDFLNTNNNGLEINIWYNSTY NNNTAYDVISLLRVPRLVNTASNAYMKFLKGSGVEMLLEYVKDMPKVGTKPKFDLSSLLG ALFFTWIIELLFPVILTYLVYEKQQKLKIMMKMHGLKDEPYWMISYSYFFALSAVYMIVF VVFGSLIGLNFFKTNNYGIQFVFYFIYINLQIALAFFVAAFFSSVKTATVVGYIYVFGSG LLGAFLLRFFVESTSFPKGWIVVMEIIPGFSLYRGLYELGQYAFSGNAMGTNGMEWTNLR DSENGMRNVLIIMVVEWAILLPLAFYLDKISSLGSGARKTPMFFLKRFKNRAVSLRRSFG RQGSKVVVEMDNPDVSQEREVVEQLLLEPNASQAIICDNLKKVYHGKDGNPDKLAVRGLS LALPKGQCFGMLGPNGAGKTSFISMMIGLIPPTSGTALVHGMDINTDMDSIYTNMGVCPQ HDLLWETLTGKEHLLFYGRLKNLKGAELEKAVDDSLKNVNLFHGGVGNKQVGKYSGGMKR RLSVAISLIGDPKVVFMDEPSTGLDPASRNNLWNVVKEAKKNRAIILTTHSMEEAEVLCD RLGIFVDGGFQCLGNPKELKARYGGTYVFTMTTSSEHEQEVKQLVQHLSPSANRIYHISG TQKFELPKQEVKIADVFHAVEKAKRQFSIHAWGLVDTTLEDVFIKVAKGAQGVNVIA

Transcript Sequence

Transcript ID	Os08t0398300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:18993292:18998956:1 gene:Os08g0398300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER A FAMILY MEMBER 4 description:ABC transporter-like domain containing protein. (Os08t0398300-01)
Sequence	TAGCTTCTCCCCCCACCTCCTCCGCCTCCGACGATGGCAGACACCTCCTCCTCGTCGTCG TCGAGGGGCGCCGCCGGATTCGCCACGCAGGCCAATGCCCTCCTCCGCAAGAACCTCTGC TTCCAGAGGAGGAACATGAAGACGAACGCGTGCATCACGGTGTTCCCGGTGTTCCTGTGC GTGATCCTCGTGGTGCTCCAGGGGGTGATCAACCACGAGATCAACAAGCCCAAGTACCAG TGCGGCTGCGCCTGCGTGGACGCCGCGCCGGACGGGACCTGCCGGAGGACGGAGTGCGGC GTCGAGCACTCCACGCTGGACCAGGTGGGGAGCTGCCCGATCAAGAGCCCGACGCCATGG CCGGCCTTGGTCCAGGTCCCCCGCCCCGAGTCCCGGGCCGTCAGGATCGCCTCCCAGCCG TTCGACGGTTTGCCTGACCCGACCTGCAGGGACACAGGGTCTTGCCCTGCCTCTGTCCTT GTCACCGGAATGAACCGCTCGCTTGCTCAAAGTCTTTGGGGTGGATTGTTCCCTGCTGTG CCTCCCTCTCTGAATTTCACGGATTATCTTGACGCGTTCTCCAAGATTGTTGCTGGGTCA GACACATGGACATGGACAACGCAGTTCATAGAGCCGGTATTTACCCCAGGGCATTCTTTA TATGTGGTCCAGCCTCAGTGTTCGTCCAATTTATCACGAACAATTTCTAACAAAGCTGGA CCTGTACCCATTCAACTCAATATAGACTGCGTTCAAGGCTTATCATTATGGCGTGAAAGT GCATCACAAATTAATAATGAACTATTTAGAGGTTATAGACAGCAAGGTGGAGGAGGTGGA GGAGGAAAGACAAATGAATTTATTGCAGGCTATGATTTTCTGAACACAAACAACAATGGT CTTGAAATAAACATTTGGTACAACTCTACATATAACAACAACACTGCATATGACGTCATC TCATTGCTACGAGTTCCACGCTTGGTTAACACGGCATCCAATGCATACATGAAATTTCTT AAAGGAAGTGGAGTGGAGATGCTGCTTGAATACGTTAAAGATATGCCAAAAGTAGGAACC AAACCAAAATTTGATCTCTCTTCTCTTCTTGGTGCTCTGTTCTTCACCTGGATCATTGAA CTACTTTTTCCAGTTATCTTAACATATCTCGTGTACGAGAAGCAACAGAAGCTGAAAATT ATGATGAAGATGCACGGCTTGAAGGATGAGCCTTACTGGATGATATCATATTCTTACTTC TTTGCTCTATCAGCTGTCTATATGATAGTGTTTGTGGTATTTGGATCCTTGATAGGTTTA AATTTCTTTAAAACAAATAACTACGGCATTCAGTTTGTTTTCTACTTCATCTACATAAAT CTTCAGATCGCACTTGCATTTTTCGTTGCGGCCTTCTTTTCTTCTGTAAAAACAGCCACA GTGGTTGGTTATATATATGTATTTGGTTCTGGCTTACTAGGGGCATTTCTTCTGAGGTTT TTTGTGGAGTCTACTAGTTTTCCGAAGGGTTGGATAGTAGTCATGGAAATCATCCCTGGA TTTTCGCTGTACCGAGGGTTATATGAGCTTGGTCAATATGCATTCTCTGGAAATGCAATG GGAACAAATGGTATGGAGTGGACTAATCTGAGGGACTCTGAGAATGGAATGCGCAATGTC TTGATTATCATGGTTGTCGAATGGGCTATTCTACTCCCATTAGCATTTTATTTGGATAAA ATCTCATCATTGGGTAGTGGAGCCCGTAAAACACCCATGTTCTTCTTGAAACGTTTCAAA AATCGTGCTGTATCACTGCGGAGGAGCTTTGGGAGACAAGGGTCTAAAGTAGTTGTTGAA ATGGACAACCCTGATGTTTCCCAAGAAAGAGAGGTAGTCGAGCAACTTCTGCTGGAACCA AATGCAAGCCAAGCAATCATATGCGACAACCTGAAGAAGGTTTACCATGGAAAGGATGGA AACCCGGACAAACTTGCAGTTCGAGGGTTGTCTCTTGCCCTCCCTAAAGGCCAATGTTTT GGTATGCTTGGCCCGAATGGAGCTGGGAAAACATCATTTATCAGCATGATGATTGGGCTC ATTCCACCCACATCTGGCACAGCATTAGTCCATGGGATGGACATAAACACTGATATGGAT AGCATCTACACAAATATGGGTGTATGCCCACAACACGACCTACTTTGGGAAACATTGACT GGAAAAGAGCATCTATTGTTTTATGGGAGATTAAAGAATCTTAAAGGCGCTGAATTAGAG AAGGCAGTTGATGACTCCCTGAAGAATGTTAACCTGTTTCACGGTGGTGTTGGAAATAAG CAAGTGGGGAAGTACAGTGGTGGCATGAAACGAAGGCTTAGTGTCGCAATCTCATTGATT GGGGACCCCAAGGTTGTTTTCATGGATGAGCCTAGCACTGGACTAGATCCAGCATCAAGA AATAACTTGTGGAATGTTGTGAAGGAGGCAAAGAAAAATCGTGCTATCATTCTTACAACA CATTCAATGGAAGAGGCAGAGGTGCTATGTGATAGACTCGGTATTTTTGTAGATGGTGGT TTTCAATGCCTTGGGAATCCAAAGGAGCTGAAAGCTAGATATGGTGGCACATATGTGTTC ACTATGACAACATCTTCAGAACATGAACAGGAGGTCAAACAGCTGGTTCAGCATTTGTCA CCAAGTGCAAACAGGATATATCACATATCAGGGACGCAGAAATTTGAGCTGCCAAAACAG GAGGTGAAGATAGCAGACGTTTTCCATGCAGTTGAGAAGGCAAAAAGACAGTTCAGCATA CACGCTTGGGGCCTCGTCGACACCACCTTGGAGGATGTCTTCATCAAGGTTGCCAAAGGA GCACAAGGAGTCAATGTGATCGCGTAAATAATATTATGGATCGATAGGTGGTTATTTTTT TTCCTTCATAGGATCATGTGTTGTATATAGTTTGTTTGAACTATATGCTAACCTTTACTT GGCATTGTGATTGAGTTGTTCATGTAGTATGGTAAAGTTGTATATTTAGCAACCATGGAA TTCATATTGTAATGTATAACACCAATTAGGCCTTTTTGGGTTTAGAGGGGGTTGAAGGGG ATTTGAGGGATTTGAGGGGGAATAATTCCACATCACAATAGGTGTGCAATAAATCCCCTC CAATCCCTCCCTCTTGGGGATTAACCGAACATGGCCTTAGTGGTAGTTGATTTTGACTAA AACCAGCTGAGCAGAATGTGCATATTTAAAACTATATCGGGTTTTTTTCCCGCAAACAGA AAGCTATATGCGATTTTATTTTATTTAGTAAAATGTTGAAAACAATGTTAAGAAAGCACA TTACCTAGTCCCTACTTGTATCTTTCTTTGATTCATTATCCTTCAATGACATCCTGAACA ATACATTAATAGCTTCTG