Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0398000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:18960126:18966328:-1 gene:Os08g0398000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER A FAMILY MEMBER 3 description:ABC transporter-like domain containing protein. (Os08t0398000-01)
Sequence	ATGGAGCTCCTGAGCGGGGCGGCGCTGGCGTGGCAGCAGTACCGCGCCCTCCTCCGCAAG AACGCCACGCTCACCTGGCGCCACCGCCGCTCCGCCTCCCTCCAGCTCCTCTCCTCGCTC GTCTTCATCTTCCTCATCTTCTGCATCGACCGCGCCATCCGCTCCCGCTTCTCCTACACC ACCGCCTACCGCAACGTCCCCGACCCGGCCGCCCTCGTCGCCCCGCCCATCCCGCCCTGC GAGGACAAGTACTTCGTCAGGGAGCCCTGCTACGACTTCCTCTGGAGCGGCGGCGGCGGC GCCGGGAGCGCACGCGTCGCCGGGATCGTCGAGGCCATCCGGAGGAACAACCCCGGCAGG CCGATCCCCGCCGAGAAGGTCTTGGGTTTTAATACTCCAGATGAAGTTGATGCTTGGCTT TTCCAAAATCCAATGCGCTGCCCTGGCGCCTTACATTTTCAAGTTATAAACGACACTCAG ATAAAGTATGGTATTCAGACGAACTCCACTCCGGTAGCTCGGAGAGGAACATATGAGGAT CCTACCTTCAAGTTCCAGATACCACTTCAAATTGCAGCTGAGAGGGAAATGGCGAGGCTG CTGATTGGAGACCCAAATTTTAGCTGGACTGTGGGGTTCAAGGAGTTCGCTCACCCAGCT ACAGAAACCTTCTCTACTATTGCCCAAGCTGGGCCAACTTTCTTCCTTGCTATTGCTATG TTCGGATTCGTTTTTCAAATCAGTGCGTTGGTGACAGAGAAAGAGCTTAAGCTTCGTCAG GCTATGTCTATCATGGGGCTCTACGAGTCAGCGTATTGGTTGTCTTGGTTAACCTGGGAG GCTTTCGTCACATTACTTTCAGCACTTCTTACTGTGCTCTTTGGGATGATGTTCCAGTTT GACTTCTTTCTGCACAATAACTTTGGGATCCTATTCCTCCTCTTCTTTCTCTTCCAACTG AACATGCTTAGTTTTGCCTTCATGATATCCACATTTGTAACAAAAGCAGCATCAGCTACT ACTGTTGGATTTGCAATATTCATTATTGGCTTCTTGACACAACTTGTTACAACCTTTGGG TTCCCATATTCAACTTCCTACCAGAAGTACTACCGGACAATATGGTCCTTGTTTCCACCT GATGTTTTTGCCCAAGCCCTCAATATTCTGGGCAAGGCAACGGCCACTCCTGAAGACAAA GGAATCAGCTGGAATCAGCGGGGACAATGCCAATCTTTTGAGACAGATTGCGTCATTACT ATTGATGATATCTACAAATGGCTCATCTCCACATTTTTCTTGTGGTTTGTCCTGGCGATC TACTTTGACAACATAATTCCAAATGTCAATGGTGTTCGAAAGTCAGTGTTCTACTTTCTG ATGCCTTCATACTGGACAGGAAAAGGAGGAGGAAAGTTGCAAGAGGGAGGACTCTTTAGC TTTTTTGGTTCGAACCGCCCAGCTGATGATGCTTCTCCTACTGATGAGGATGTTATTGCT GAGGAAAATCTAGTAAAACAACAAGCTGCAAACAATGAAGTAGATCCTGGTGTTGCAGTT CAAATATGTGGTTTGCGGAAAACATATCCAGGGAGTTTTAGTATGGGTTGCTGCAGATGC AGGACAACTAAACCGTTTCATTCTGTCAAAGGTTTATGGGTGAACCTTGAGAAGGACCAG TTATTTTGCCTTCTTGGGCCCAATGGAGCTGGTAAAACAACAACAATCAGTTGCTTGACT GGAATCACACCAATTACAGGCGGCGATGCGATGATTTATGGGCATTCTGTTCGAAGCACT GCTGGGATGTCGAATATTCGGAGGATGATAGGAGTCTGTCCGCAGTTTGACATCTTGTGG GATGCGCTAACAGCTAAAGAGCACATGGAGCTGTTTGCTAGCATTAAGGGACTGCCTCCA TCAACAATCAAGTCGGTAGCAGAACAATCCTTAATCCAAGTGAAGCTCAGCCAGGCAGCT AATGTTAGAGCAGGTAGCTACAGTGGGGGAATGAAACGCCGGCTAAGTGTTGCAATAGCT CTAATTGGTGATCCAAAATTGGTCTTTCTTGATGAACCGACTACTGGCATGGATCCAATA ACAAGGAGGCATGTCTGGGACATCATAGAGGAAGCAAAGAAAGGAAGAGCTATTGTCTTG ACCACCCATTCCATGGAGGAAGCTGACATTCTGAGTGACAGGATCGCAATCATGGCTAAA GGGAAATTGCGGTGCATTGGGACTTCAATTAGGCTGAAGTCGAAATTTGGAACAGGATAT ATTGCTAATGTGAATTTCTCTGGAAATGGTCACACACAAAGCCCTAACATCAACGGCAAC ACTGAAGTCCCGGTTAACCCTAACATAGAATCTGTCAAATGGTTCTTCAAGGAACGGCTT GATGTGGACCCAAAAGAGGAGAGCAGGACATTCTTAACGTTCGTCATCCCCCATGAGAAA GAACCACTTCTGACGAGGTTCTTTGGGGAACTCCAAGACAGGGAACGGGAATTCGGTATC TCAGACATTCAACTCGGCCTCACGACGCTCGAAGAAGTATTCCTGAACATCGCAAAGCAG GCAGAACTGGAGAGCTCTACTGCTGAAGGCACCCTGGTTACTCTGAACCTATCATCAGGT TCATCTATTCAGATACCAAAGGGGGCTCGTTTTGTCGGAATTCCCGGAACCGAGTCGGAG GATCACCCAAGAGGCGTGATGGTTGAAGTTTACTGGGATCAAGATGACAATGGATCACTC TGCATTTCTGGTCACTCTGATGAAATCCCTGTCCCAGCCAATGTTCAGCTGGGTCGGCCC CCTTCGCTGTCTCGTAGGGCCTCAGTGGGCCGTGGAAACCCTGTTGGGTACATCATTGAT CCGAATGAGGTCACAGCAGCAAGATGA

Peptide Sequence

PEP ID	Os08t0398000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:18960126:18966328:-1 gene:Os08g0398000 transcript:Os08t0398000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER A FAMILY MEMBER 3 description:ABC transporter-like domain containing protein. (Os08t0398000-01)
Sequence	MELLSGAALAWQQYRALLRKNATLTWRHRRSASLQLLSSLVFIFLIFCIDRAIRSRFSYT TAYRNVPDPAALVAPPIPPCEDKYFVREPCYDFLWSGGGGAGSARVAGIVEAIRRNNPGR PIPAEKVLGFNTPDEVDAWLFQNPMRCPGALHFQVINDTQIKYGIQTNSTPVARRGTYED PTFKFQIPLQIAAEREMARLLIGDPNFSWTVGFKEFAHPATETFSTIAQAGPTFFLAIAM FGFVFQISALVTEKELKLRQAMSIMGLYESAYWLSWLTWEAFVTLLSALLTVLFGMMFQF DFFLHNNFGILFLLFFLFQLNMLSFAFMISTFVTKAASATTVGFAIFIIGFLTQLVTTFG FPYSTSYQKYYRTIWSLFPPDVFAQALNILGKATATPEDKGISWNQRGQCQSFETDCVIT IDDIYKWLISTFFLWFVLAIYFDNIIPNVNGVRKSVFYFLMPSYWTGKGGGKLQEGGLFS FFGSNRPADDASPTDEDVIAEENLVKQQAANNEVDPGVAVQICGLRKTYPGSFSMGCCRC RTTKPFHSVKGLWVNLEKDQLFCLLGPNGAGKTTTISCLTGITPITGGDAMIYGHSVRST AGMSNIRRMIGVCPQFDILWDALTAKEHMELFASIKGLPPSTIKSVAEQSLIQVKLSQAA NVRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIEEAKKGRAIVL TTHSMEEADILSDRIAIMAKGKLRCIGTSIRLKSKFGTGYIANVNFSGNGHTQSPNINGN TEVPVNPNIESVKWFFKERLDVDPKEESRTFLTFVIPHEKEPLLTRFFGELQDREREFGI SDIQLGLTTLEEVFLNIAKQAELESSTAEGTLVTLNLSSGSSIQIPKGARFVGIPGTESE DHPRGVMVEVYWDQDDNGSLCISGHSDEIPVPANVQLGRPPSLSRRASVGRGNPVGYIID PNEVTAAR

Transcript Sequence

Transcript ID	Os08t0398000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:18960126:18966328:-1 gene:Os08g0398000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER A FAMILY MEMBER 3 description:ABC transporter-like domain containing protein. (Os08t0398000-01)
Sequence	AACTCCCTCCCCCTCCAAGAAGCGAACAAGCCAAGAACTCCTCCAACTCCGCCCTCCAAT GGAGCTCCTGAGCGGGGCGGCGCTGGCGTGGCAGCAGTACCGCGCCCTCCTCCGCAAGAA CGCCACGCTCACCTGGCGCCACCGCCGCTCCGCCTCCCTCCAGCTCCTCTCCTCGCTCGT CTTCATCTTCCTCATCTTCTGCATCGACCGCGCCATCCGCTCCCGCTTCTCCTACACCAC CGCCTACCGCAACGTCCCCGACCCGGCCGCCCTCGTCGCCCCGCCCATCCCGCCCTGCGA GGACAAGTACTTCGTCAGGGAGCCCTGCTACGACTTCCTCTGGAGCGGCGGCGGCGGCGC CGGGAGCGCACGCGTCGCCGGGATCGTCGAGGCCATCCGGAGGAACAACCCCGGCAGGCC GATCCCCGCCGAGAAGGTCTTGGGTTTTAATACTCCAGATGAAGTTGATGCTTGGCTTTT CCAAAATCCAATGCGCTGCCCTGGCGCCTTACATTTTCAAGTTATAAACGACACTCAGAT AAAGTATGGTATTCAGACGAACTCCACTCCGGTAGCTCGGAGAGGAACATATGAGGATCC TACCTTCAAGTTCCAGATACCACTTCAAATTGCAGCTGAGAGGGAAATGGCGAGGCTGCT GATTGGAGACCCAAATTTTAGCTGGACTGTGGGGTTCAAGGAGTTCGCTCACCCAGCTAC AGAAACCTTCTCTACTATTGCCCAAGCTGGGCCAACTTTCTTCCTTGCTATTGCTATGTT CGGATTCGTTTTTCAAATCAGTGCGTTGGTGACAGAGAAAGAGCTTAAGCTTCGTCAGGC TATGTCTATCATGGGGCTCTACGAGTCAGCGTATTGGTTGTCTTGGTTAACCTGGGAGGC TTTCGTCACATTACTTTCAGCACTTCTTACTGTGCTCTTTGGGATGATGTTCCAGTTTGA CTTCTTTCTGCACAATAACTTTGGGATCCTATTCCTCCTCTTCTTTCTCTTCCAACTGAA CATGCTTAGTTTTGCCTTCATGATATCCACATTTGTAACAAAAGCAGCATCAGCTACTAC TGTTGGATTTGCAATATTCATTATTGGCTTCTTGACACAACTTGTTACAACCTTTGGGTT CCCATATTCAACTTCCTACCAGAAGTACTACCGGACAATATGGTCCTTGTTTCCACCTGA TGTTTTTGCCCAAGCCCTCAATATTCTGGGCAAGGCAACGGCCACTCCTGAAGACAAAGG AATCAGCTGGAATCAGCGGGGACAATGCCAATCTTTTGAGACAGATTGCGTCATTACTAT TGATGATATCTACAAATGGCTCATCTCCACATTTTTCTTGTGGTTTGTCCTGGCGATCTA CTTTGACAACATAATTCCAAATGTCAATGGTGTTCGAAAGTCAGTGTTCTACTTTCTGAT GCCTTCATACTGGACAGGAAAAGGAGGAGGAAAGTTGCAAGAGGGAGGACTCTTTAGCTT TTTTGGTTCGAACCGCCCAGCTGATGATGCTTCTCCTACTGATGAGGATGTTATTGCTGA GGAAAATCTAGTAAAACAACAAGCTGCAAACAATGAAGTAGATCCTGGTGTTGCAGTTCA AATATGTGGTTTGCGGAAAACATATCCAGGGAGTTTTAGTATGGGTTGCTGCAGATGCAG GACAACTAAACCGTTTCATTCTGTCAAAGGTTTATGGGTGAACCTTGAGAAGGACCAGTT ATTTTGCCTTCTTGGGCCCAATGGAGCTGGTAAAACAACAACAATCAGTTGCTTGACTGG AATCACACCAATTACAGGCGGCGATGCGATGATTTATGGGCATTCTGTTCGAAGCACTGC TGGGATGTCGAATATTCGGAGGATGATAGGAGTCTGTCCGCAGTTTGACATCTTGTGGGA TGCGCTAACAGCTAAAGAGCACATGGAGCTGTTTGCTAGCATTAAGGGACTGCCTCCATC AACAATCAAGTCGGTAGCAGAACAATCCTTAATCCAAGTGAAGCTCAGCCAGGCAGCTAA TGTTAGAGCAGGTAGCTACAGTGGGGGAATGAAACGCCGGCTAAGTGTTGCAATAGCTCT AATTGGTGATCCAAAATTGGTCTTTCTTGATGAACCGACTACTGGCATGGATCCAATAAC AAGGAGGCATGTCTGGGACATCATAGAGGAAGCAAAGAAAGGAAGAGCTATTGTCTTGAC CACCCATTCCATGGAGGAAGCTGACATTCTGAGTGACAGGATCGCAATCATGGCTAAAGG GAAATTGCGGTGCATTGGGACTTCAATTAGGCTGAAGTCGAAATTTGGAACAGGATATAT TGCTAATGTGAATTTCTCTGGAAATGGTCACACACAAAGCCCTAACATCAACGGCAACAC TGAAGTCCCGGTTAACCCTAACATAGAATCTGTCAAATGGTTCTTCAAGGAACGGCTTGA TGTGGACCCAAAAGAGGAGAGCAGGACATTCTTAACGTTCGTCATCCCCCATGAGAAAGA ACCACTTCTGACGAGGTTCTTTGGGGAACTCCAAGACAGGGAACGGGAATTCGGTATCTC AGACATTCAACTCGGCCTCACGACGCTCGAAGAAGTATTCCTGAACATCGCAAAGCAGGC AGAACTGGAGAGCTCTACTGCTGAAGGCACCCTGGTTACTCTGAACCTATCATCAGGTTC ATCTATTCAGATACCAAAGGGGGCTCGTTTTGTCGGAATTCCCGGAACCGAGTCGGAGGA TCACCCAAGAGGCGTGATGGTTGAAGTTTACTGGGATCAAGATGACAATGGATCACTCTG CATTTCTGGTCACTCTGATGAAATCCCTGTCCCAGCCAATGTTCAGCTGGGTCGGCCCCC TTCGCTGTCTCGTAGGGCCTCAGTGGGCCGTGGAAACCCTGTTGGGTACATCATTGATCC GAATGAGGTCACAGCAGCAAGATGAGTGCCAAAGAAAGAAGAATATTCTGAGAGTGGATG AATTTAGATTTGTCTTCATGTAAATTATCTCTAGGTGTAATGCAACTATAGATATGTTTG TACTAGAACAGTGTATTTTTTCTGTTTTGTGGTAAAGGAAGTGCTTGATGATAGATACAA CATGCTTACATCTTCCATTTGGTGGCTGACAAAGAGCTTGACGATTACAGATGCAAGAAT GACAGGAATTTTTACAGTGATTTAATTTGTTGCATTCAGGACGGTAGGATGTCTGGGGTC CTTGTTTTGTCGCTCATAATTTATTTTTTTTGTTCATGGGTGAAGTAT