Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0395300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:18758478:18760304:1 gene:Os08g0395300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AP-4 complex subunit sigma-1. (Os08t0395300-01)
Sequence	ATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTAC TACGAGCACCTCTCCATCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGC CTCGCCCGCACCGACCAGCAGTGTTCGTTCGTGGAGCACCGGAACTACAAGGTGGTGTAC CGGCGGTACGCTTCCCTCTTCTTCCTCGTCGGCGTCGACAACGACGAGAATGAGCTAGCT ATTCTCGAATTCATTCATCTTTTTGTGGAAACTATGGACCGCCACTTCGGAAATGTGTGT GAACTCGACATCATGTTCCATCTAGAGAAGGTGCACTTCATGCTGGAAGAGATGGTGATG AATGGCTGCATAGTAGAGACAAGTAAACAGAACATCTTAGCACCAATCCAGCTTATGGAG AAAACTTCTTAG

Peptide Sequence

PEP ID	Os08t0395300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:18758478:18760304:1 gene:Os08g0395300 transcript:Os08t0395300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AP-4 complex subunit sigma-1. (Os08t0395300-01)
Sequence	MGIRFVLFVNKQGQTRLAQYYEHLSIDERRALEGEIVRKCLARTDQQCSFVEHRNYKVVY RRYASLFFLVGVDNDENELAILEFIHLFVETMDRHFGNVCELDIMFHLEKVHFMLEEMVM NGCIVETSKQNILAPIQLMEKTS

Transcript Sequence

Transcript ID	Os08t0395300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:18758478:18760304:1 gene:Os08g0395300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AP-4 complex subunit sigma-1. (Os08t0395300-01)
Sequence	GGTTGCCTTGTGTTGAAGACGAGTATGGGCAAGAAGAGTCAAACAGAAGACGGGAGAGAG AAAGAAAGAAAGAGCAGAGTGTCGAGAGGTTGAAGACGAAGCAGCCTTGGAACAGAGCGA AGGAAGAAGCGAGGAGAGGCGAGGCGATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGC AGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCCGCGCCC TCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCAGCAGTGTTCGTTCGTGG AGCACCGGAACTACAAGGTGGTGTACCGGCGGTACGCTTCCCTCTTCTTCCTCGTCGGCG TCGACAACGACGAGAATGAGCTAGCTATTCTCGAATTCATTCATCTTTTTGTGGAAACTA TGGACCGCCACTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAGAAGGTGC ACTTCATGCTGGAAGAGATGGTGATGAATGGCTGCATAGTAGAGACAAGTAAACAGAACA TCTTAGCACCAATCCAGCTTATGGAGAAAACTTCTTAGAATAGCATTCTCTAACTATCTA GTTTTTAATCCTTTTGTCTCTGTGGTGCTTTATCTTTCATCTACTGGGGAGTATAAAAAA TTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAA AGATGCGATGTACTTTTCTTCATGTT